RNA–Protein interactions for RNA: ENST00000339162.11

PDLIM2-203, Transcript of PDZ and LIM domain 2, humanhuman

TSL 1 (best) BASIC

Gene PDLIM2, Length 2,226 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-203ENST00000339162 AKR1C4P17516 323 aa19.13■□□□□ 0.65
PDLIM2-203ENST00000339162 PI3P19957 117 aa19.13■□□□□ 0.65
PDLIM2-203ENST00000339162 TAS2R46P59540 309 aa19.13■□□□□ 0.65
PDLIM2-203ENST00000339162 GMFBP60983 142 aa19.13■□□□□ 0.65
PDLIM2-203ENST00000339162 SNRPD2P62316 118 aaKnown RBP19.13■□□□□ 0.65
PDLIM2-203ENST00000339162 ARRDC1Q8N5I2 433 aa19.13■□□□□ 0.65
PDLIM2-203ENST00000339162 OR2T35Q8NGX2 323 aa19.13■□□□□ 0.65
PDLIM2-203ENST00000339162 PPA2Q9H2U2 334 aa19.13■□□□□ 0.65
PDLIM2-203ENST00000339162 Q9UFV3 132 aa19.13■□□□□ 0.65
PDLIM2-203ENST00000339162 AMDHD2Q9Y303 409 aa19.13■□□□□ 0.65
PDLIM2-203ENST00000339162 NPTNQ9Y639 398 aa19.13■□□□□ 0.65
PDLIM2-203ENST00000339162 IQCF6A8MYZ5 107 aa19.12■□□□□ 0.65
PDLIM2-203ENST00000339162 M0R1B8 84 aa19.12■□□□□ 0.65
PDLIM2-203ENST00000339162 HLA-AP01891 365 aaKnown RBP19.12■□□□□ 0.65
PDLIM2-203ENST00000339162 C22orf34Q6ZV56 151 aa19.12■□□□□ 0.65
PDLIM2-203ENST00000339162 OVCH2Q7RTZ1 564 aa19.12■□□□□ 0.65
PDLIM2-203ENST00000339162 LIX1LQ8IVB5 337 aa19.12■□□□□ 0.65
PDLIM2-203ENST00000339162 SPICQ8N5J4 248 aa19.12■□□□□ 0.65
PDLIM2-203ENST00000339162 OR2AK2Q8NG84 335 aa19.12■□□□□ 0.65
PDLIM2-203ENST00000339162 GRPEL2Q8TAA5 225 aa19.12■□□□□ 0.65
PDLIM2-203ENST00000339162 RTL8AQ9BWD3 113 aa19.12■□□□□ 0.65
PDLIM2-203ENST00000339162 GOSR2O14653 212 aa19.12■□□□□ 0.65
PDLIM2-203ENST00000339162 ARPC4P59998 168 aa19.12■□□□□ 0.65
PDLIM2-203ENST00000339162 PPP1R1AQ13522 171 aa19.12■□□□□ 0.65
PDLIM2-203ENST00000339162 Q6ZPA2 131 aa19.12■□□□□ 0.65
PDLIM2-203ENST00000339162 ZDHHC22Q8N966 263 aa19.12■□□□□ 0.65
PDLIM2-203ENST00000339162 MICU1Q9BPX6 476 aa19.12■□□□□ 0.65
PDLIM2-203ENST00000339162 PIPOXQ9P0Z9 390 aa19.12■□□□□ 0.65
PDLIM2-203ENST00000339162 MGAT4AQ9UM21 535 aa19.12■□□□□ 0.65
PDLIM2-203ENST00000339162 CADP27708 2225 aa19.11■□□□□ 0.65
PDLIM2-203ENST00000339162 A8MXE2 369 aa19.11■□□□□ 0.65
PDLIM2-203ENST00000339162 HOXD4P09016 255 aaPredicted RBP19.11■□□□□ 0.65
PDLIM2-203ENST00000339162 H2BFSP57053 126 aa19.11■□□□□ 0.65
PDLIM2-203ENST00000339162 IKZF1Q13422 519 aa19.11■□□□□ 0.65
PDLIM2-203ENST00000339162 CDK10Q15131 360 aa19.11■□□□□ 0.65
PDLIM2-203ENST00000339162 TIMM23BQ5SRD1 257 aa19.11■□□□□ 0.65
PDLIM2-203ENST00000339162 LAMTOR1Q6IAA8 161 aa19.11■□□□□ 0.65
PDLIM2-203ENST00000339162 SLC25A42Q86VD7 318 aa19.11■□□□□ 0.65
PDLIM2-203ENST00000339162 HYLS1Q96M11 299 aa19.11■□□□□ 0.65
PDLIM2-203ENST00000339162 ANXA10Q9UJ72 324 aa19.11■□□□□ 0.65
PDLIM2-203ENST00000339162 GRPP07492 148 aa19.1■□□□□ 0.65
PDLIM2-203ENST00000339162 IL24Q13007 206 aa19.1■□□□□ 0.65
PDLIM2-203ENST00000339162 AADACL3Q5VUY0 350 aa19.1■□□□□ 0.65
PDLIM2-203ENST00000339162 DCAF12L2Q5VW00 463 aa19.1■□□□□ 0.65
PDLIM2-203ENST00000339162 SCCPDHQ8NBX0 429 aa19.1■□□□□ 0.65
PDLIM2-203ENST00000339162 TMEM246Q9BRR3 403 aa19.1■□□□□ 0.65
PDLIM2-203ENST00000339162 PURGQ9UJV8 347 aaKnown RBP19.1■□□□□ 0.65
PDLIM2-203ENST00000339162 SPTA1P02549 2419 aa19.1■□□□□ 0.65
PDLIM2-203ENST00000339162 PCNX1Q96RV3 2341 aa19.1■□□□□ 0.65
PDLIM2-203ENST00000339162 G3V3Q6 166 aa19.1■□□□□ 0.65
PDLIM2-203ENST00000339162 CDIPTO14735 213 aa19.1■□□□□ 0.65
PDLIM2-203ENST00000339162 UCNP55089 124 aa19.1■□□□□ 0.65
PDLIM2-203ENST00000339162 NAAAQ02083 359 aa19.1■□□□□ 0.65
PDLIM2-203ENST00000339162 OR8G1Q15617 311 aa19.1■□□□□ 0.65
PDLIM2-203ENST00000339162 LIN54Q6MZP7 749 aa19.1■□□□□ 0.65
PDLIM2-203ENST00000339162 C12orf45Q8N5I9 185 aaPredicted RBP19.1■□□□□ 0.65
PDLIM2-203ENST00000339162 ZFAND1Q8TCF1 268 aa19.1■□□□□ 0.65
PDLIM2-203ENST00000339162 TMPRSS13Q9BYE2 586 aa19.1■□□□□ 0.65
PDLIM2-203ENST00000339162 HSPB11Q9Y547 144 aa19.1■□□□□ 0.65
PDLIM2-203ENST00000339162 OR5H14A6NHG9 310 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 MLNRO43193 412 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 VAMP1P23763 118 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 DNASE1P24855 282 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 ZNF154Q13106 437 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 C11orf88Q6PI97 169 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 BCL2L14Q9BZR8 327 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 C5orf66Q9H5L9 145 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 RANBP3Q9H6Z4 567 aaPredicted RBP19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 MSL2Q9HCI7 577 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 MYOZ1Q9NP98 299 aaPredicted RBP19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 H3BUI4 141 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 J3QT63 122 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 TIMM8AO60220 97 aaPredicted RBP19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 ZBTB25P24278 435 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 RBMXP38159 391 aaKnown RBP19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 FAM76BQ5HYJ3 339 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 C5orf24Q7Z6I8 188 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 LHFPL1Q86WI0 220 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 TMEM17Q86X19 198 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 OR8G5Q8NG78 346 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 CASTOR1Q8WTX7 329 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 MUCL1Q96DR8 90 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 PKIBQ9C010 78 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 TMEM100Q9NV29 134 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 OSGIN2Q9Y236 505 aa19.09■□□□□ 0.65
PDLIM2-203ENST00000339162 SLC22A5O76082 557 aa19.08■□□□□ 0.65
PDLIM2-203ENST00000339162 DTYMKP23919 212 aa19.08■□□□□ 0.65
PDLIM2-203ENST00000339162 HOXA4Q00056 320 aaPredicted RBP19.08■□□□□ 0.65
PDLIM2-203ENST00000339162 SLC22A25Q6T423 547 aa19.08■□□□□ 0.65
PDLIM2-203ENST00000339162 UNQ6126/PRO20091Q6UXV3 157 aa19.08■□□□□ 0.65
PDLIM2-203ENST00000339162 FAM58AQ8N1B3 248 aa19.08■□□□□ 0.65
PDLIM2-203ENST00000339162 C12orf4Q9NQ89 552 aa19.08■□□□□ 0.65
PDLIM2-203ENST00000339162 GPR132Q9UNW8 380 aa19.08■□□□□ 0.65
PDLIM2-203ENST00000339162 NOP16Q9Y3C1 178 aaKnown RBP19.08■□□□□ 0.65
PDLIM2-203ENST00000339162 C1QTNF9BB2RNN3 333 aa19.08■□□□□ 0.64
PDLIM2-203ENST00000339162 HS3ST1O14792 307 aa19.08■□□□□ 0.64
PDLIM2-203ENST00000339162 C1QTNF9P0C862 333 aa19.08■□□□□ 0.64
PDLIM2-203ENST00000339162 GCH1P30793 250 aa19.08■□□□□ 0.64
PDLIM2-203ENST00000339162 IL13RA1P78552 427 aa19.08■□□□□ 0.64
PDLIM2-203ENST00000339162 NHLRC3Q5JS37 347 aa19.08■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms