RNA–Protein interactions for RNA: ENST00000338163.10

RBM39-202, Transcript of RNA binding motif protein 39, humanhuman

TSL 2

Gene RBM39, Length 2,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-202ENST00000338163 C10orf142B7Z368 130 aa10.34□□□□□ -0.75
RBM39-202ENST00000338163 MDKP21741 143 aaPredicted RBP10.34□□□□□ -0.75
RBM39-202ENST00000338163 TAF9Q16594 264 aa10.34□□□□□ -0.75
RBM39-202ENST00000338163 C20orf196Q8IYI0 205 aa10.34□□□□□ -0.75
RBM39-202ENST00000338163 HIST3H2BBQ8N257 126 aa10.34□□□□□ -0.75
RBM39-202ENST00000338163 OR11L1Q8NGX0 322 aa10.34□□□□□ -0.75
RBM39-202ENST00000338163 SNX22Q96L94 193 aa10.34□□□□□ -0.75
RBM39-202ENST00000338163 UNKLQ9H9P5 680 aaKnown RBP10.34□□□□□ -0.75
RBM39-202ENST00000338163 ANXA10Q9UJ72 324 aa10.34□□□□□ -0.75
RBM39-202ENST00000338163 TNFSF12-TNFSF13A0A0A6YY99 330 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 E9PLN8 166 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 K7N7A8 449 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 PHOX2AO14813 284 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 PHF1O43189 567 aaPredicted RBP10.33□□□□□ -0.76
RBM39-202ENST00000338163 TNFSF12O43508 249 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 ANGPTL7O43827 346 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 ATP6V0CP27449 155 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 SUCLG1P53597 346 aaKnown RBP10.33□□□□□ -0.76
RBM39-202ENST00000338163 PRSS12P56730 875 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 LSM6P62312 80 aaKnown RBP10.33□□□□□ -0.76
RBM39-202ENST00000338163 YPEL5P62699 121 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 TMEM176BQ3YBM2 270 aaPredicted RBP10.33□□□□□ -0.76
RBM39-202ENST00000338163 HIKESHIQ53FT3 197 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 C1orf189Q5VU69 101 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 LYSMD4Q5XG99 296 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 FAM180AQ6UWF9 173 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 SLC38A9Q8NBW4 561 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 HPSE2Q8WWQ2 592 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 PACRGQ96M98 296 aaPredicted RBP10.33□□□□□ -0.76
RBM39-202ENST00000338163 MAGT1Q9H0U3 335 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 PCED1AQ9H1Q7 454 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 ZNF581Q9P0T4 197 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 WSB1Q9Y6I7 421 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 SHANK1Q9Y566 2161 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 TLCD2A6NGC4 264 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 BCAT2O15382 392 aaPredicted RBP10.33□□□□□ -0.76
RBM39-202ENST00000338163 TRGC1P0CF51 173 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 SP9P0CG40 484 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 DUSP1P28562 367 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 RUNX1Q01196 453 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 EWSR1Q01844 656 aaKnown RBP eCLIP10.33□□□□□ -0.76
RBM39-202ENST00000338163 FOXF1Q12946 379 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 GPR157Q5UAW9 335 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 DOK3Q7L591 496 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 LURAP1Q96LR2 239 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 NAA60Q9H7X0 242 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 CABIN1Q9Y6J0 2220 aa10.33□□□□□ -0.76
RBM39-202ENST00000338163 SPTY2D1-AS1A0A0U1RR47 76 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 A0A1W2PQD3 144 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 SLC31A2O15432 143 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 CST7O76096 145 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 EFNA3P52797 238 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 PMS2CLQ68D20 193 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 ALKBH2Q6NS38 261 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 REC114Q7Z4M0 266 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 FAM89BQ8N5H3 189 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 OR14L1PQ8NHC6 308 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 FRZBQ92765 325 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 POM121Q96HA1 1249 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 MOB1AQ9H8S9 216 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 SLC2A9Q9NRM0 540 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 CUTCQ9NTM9 273 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 A0A087WZY1 265 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 FAM230AA0A1W2PPH8 454 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 SMCO3A2RU48 225 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 VSTM2BA6NLU5 285 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 HSD17B6O14756 317 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 PKIAP61925 76 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 FZD2Q14332 565 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 TMEM187Q14656 261 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 LANCL3Q6ZV70 420 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 UEVLDQ8IX04 471 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 TMEM123Q8N131 208 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 CA5BP1Q8WTZ4 195 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 OIT3Q8WWZ8 545 aa10.32□□□□□ -0.76
RBM39-202ENST00000338163 A0A1W2PNR3 127 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 MAS1LP35410 378 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 DCAF7P61962 342 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 RPL23AP62750 156 aaKnown RBP10.31□□□□□ -0.76
RBM39-202ENST00000338163 LRRC18Q8N456 261 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 OR10AD1Q8NGE0 317 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 DNASE2BQ8WZ79 361 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 HAS2Q92819 552 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 DDIT4LQ96D03 193 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 TVP23CQ96ET8 276 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 MISP3Q96FF7 219 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 BCO1Q9HAY6 547 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 R4GN57 208 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 A0A1W2PR77 199 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 SPRY1O43609 319 aaPredicted RBP10.31□□□□□ -0.76
RBM39-202ENST00000338163 SSSCA1O60232 199 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 IGHG1P01857 330 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 SRP19P09132 144 aaKnown RBP10.31□□□□□ -0.76
RBM39-202ENST00000338163 DBHP09172 617 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 GALNSP34059 522 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 SFTPDP35247 375 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 ECI1P42126 302 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 CAPZBP47756 277 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 CSNK1A1P48729 337 aa10.31□□□□□ -0.76
RBM39-202ENST00000338163 RAB11AP62491 216 aa10.31□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 180.5 ms