RNA–Protein interactions for RNA: ENST00000337331.9

NPHP3-201, Transcript of nephrocystin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPHP3, Length 4,362 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-201ENST00000337331 MARCH11A6NNE9 402 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 MESTQ5EB52 335 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 MOGAT1Q96PD6 335 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 FOXJ2Q9P0K8 574 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 ZNF320A2RRD8 509 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 ZBTB25P24278 435 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 GAS1P54826 345 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 ELLP55199 621 aaPredicted RBP14.25□□□□□ -0.13
NPHP3-201ENST00000337331 RPS23P62266 143 aaKnown RBP14.25□□□□□ -0.13
NPHP3-201ENST00000337331 DUSP2Q05923 314 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 ZIC1Q15915 447 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 FUT9Q9Y231 359 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 IGHV5-51A0A0C4DH38 117 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 CST7O76096 145 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 METTL15P1P0C7V9 234 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 RANP62826 216 aaKnown RBP14.25□□□□□ -0.13
NPHP3-201ENST00000337331 RARRES2Q99969 163 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 MAGT1Q9H0U3 335 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 RPH3ALQ9UNE2 315 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 FGF16O43320 207 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 HIST1H2BKO60814 126 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 HIST1H2BJP06899 126 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 B4GALT1P15291 398 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 HIST1H2BOP23527 126 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 HIST1H2BBP33778 126 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 HIST1H2BDP58876 126 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 HIST1H2BCP62807 126 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 HIST2H2BEQ16778 126 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 TMEM183BQ1AE95 376 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 HIST2H2BFQ5QNW6 126 aaPredicted RBP14.25□□□□□ -0.13
NPHP3-201ENST00000337331 HIST1H2BHQ93079 126 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 HIST1H2BNQ99877 126 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 HIST1H2BMQ99879 126 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 FRRS1LQ9P0K9 344 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 TMED3Q9Y3Q3 217 aa14.25□□□□□ -0.13
NPHP3-201ENST00000337331 DOCK3Q8IZD9 2030 aa14.24□□□□□ -0.13
NPHP3-201ENST00000337331 HLA-HP01893 362 aa14.24□□□□□ -0.13
NPHP3-201ENST00000337331 LEMD1Q68G75 181 aa14.24□□□□□ -0.13
NPHP3-201ENST00000337331 CYB561D1Q8N8Q1 229 aa14.24□□□□□ -0.13
NPHP3-201ENST00000337331 ALKBH3Q96Q83 286 aaPredicted RBP14.24□□□□□ -0.13
NPHP3-201ENST00000337331 RCL1Q9Y2P8 373 aaKnown RBP14.24□□□□□ -0.13
NPHP3-201ENST00000337331 HDGFL3Q9Y3E1 203 aa14.24□□□□□ -0.13
NPHP3-201ENST00000337331 PIGPP57054 158 aa14.24□□□□□ -0.13
NPHP3-201ENST00000337331 APCDD1LQ8NCL9 501 aa14.24□□□□□ -0.13
NPHP3-201ENST00000337331 DYNLRB1Q9NP97 96 aa14.24□□□□□ -0.13
NPHP3-201ENST00000337331 ST3GAL6Q9Y274 331 aa14.24□□□□□ -0.13
NPHP3-201ENST00000337331 DHRS7CA6NNS2 312 aa14.24□□□□□ -0.13
NPHP3-201ENST00000337331 DLEU1O43261 78 aa14.24□□□□□ -0.13
NPHP3-201ENST00000337331 GCGP01275 180 aa14.24□□□□□ -0.13
NPHP3-201ENST00000337331 ADRA2CP18825 462 aa14.24□□□□□ -0.13
NPHP3-201ENST00000337331 C16orf47Q6ZP98 133 aaPredicted RBP14.24□□□□□ -0.13
NPHP3-201ENST00000337331 OR4A16Q8NH70 328 aa14.24□□□□□ -0.13
NPHP3-201ENST00000337331 OR51I2Q9H344 312 aa14.24□□□□□ -0.13
NPHP3-201ENST00000337331 TUBA4BQ9H853 241 aa14.24□□□□□ -0.13
NPHP3-201ENST00000337331 ZNF732B4DXR9 585 aa14.23□□□□□ -0.13
NPHP3-201ENST00000337331 C17orf112F2Z3M2 114 aa14.23□□□□□ -0.13
NPHP3-201ENST00000337331 SOD3P08294 240 aa14.23□□□□□ -0.13
NPHP3-201ENST00000337331 DPPA3Q6W0C5 159 aa14.23□□□□□ -0.13
NPHP3-201ENST00000337331 ARHGEF39Q8N4T4 335 aa14.23□□□□□ -0.13
NPHP3-201ENST00000337331 IFI44Q8TCB0 444 aa14.23□□□□□ -0.13
NPHP3-201ENST00000337331 CTXN2P0C2S0 81 aa14.23□□□□□ -0.13
NPHP3-201ENST00000337331 PPP1CCP36873 323 aaKnown RBP14.23□□□□□ -0.13
NPHP3-201ENST00000337331 DTWD2Q8NBA8 298 aa14.23□□□□□ -0.13
NPHP3-201ENST00000337331 TMEM178AQ8NBL3 297 aa14.23□□□□□ -0.13
NPHP3-201ENST00000337331 CIB3Q96Q77 187 aaPredicted RBP14.23□□□□□ -0.13
NPHP3-201ENST00000337331 VN1R1Q9GZP7 353 aa14.23□□□□□ -0.13
NPHP3-201ENST00000337331 UBE2ZQ9H832 354 aaPredicted RBP14.23□□□□□ -0.13
NPHP3-201ENST00000337331 OSGIN2Q9Y236 505 aa14.23□□□□□ -0.13
NPHP3-201ENST00000337331 B4E171 279 aa14.23□□□□□ -0.13
NPHP3-201ENST00000337331 EREGO14944 169 aa14.23□□□□□ -0.13
NPHP3-201ENST00000337331 SCGB2A1O75556 95 aa14.23□□□□□ -0.13
NPHP3-201ENST00000337331 COL9A1P20849 921 aa14.23□□□□□ -0.13
NPHP3-201ENST00000337331 SLC37A1P57057 533 aa14.23□□□□□ -0.13
NPHP3-201ENST00000337331 MYBPHQ13203 477 aa14.23□□□□□ -0.13
NPHP3-201ENST00000337331 SPACA9Q96E40 222 aaPredicted RBP14.23□□□□□ -0.13
NPHP3-201ENST00000337331 RIMS4Q9H426 269 aaPredicted RBP14.23□□□□□ -0.13
NPHP3-201ENST00000337331 C5orf49A4QMS7 147 aa14.22□□□□□ -0.13
NPHP3-201ENST00000337331 C2CD4DB7Z1M9 353 aa14.22□□□□□ -0.13
NPHP3-201ENST00000337331 OPN1MWP04001 364 aa14.22□□□□□ -0.13
NPHP3-201ENST00000337331 OPN1MW2P0DN77 364 aa14.22□□□□□ -0.13
NPHP3-201ENST00000337331 OPN1MW3P0DN78 364 aa14.22□□□□□ -0.13
NPHP3-201ENST00000337331 CTLA4P16410 223 aa14.22□□□□□ -0.13
NPHP3-201ENST00000337331 OR10J1P30954 320 aa14.22□□□□□ -0.13
NPHP3-201ENST00000337331 RRADP55042 308 aa14.22□□□□□ -0.13
NPHP3-201ENST00000337331 FZD2Q14332 565 aa14.22□□□□□ -0.13
NPHP3-201ENST00000337331 SPANXN5Q5MJ07 72 aa14.22□□□□□ -0.13
NPHP3-201ENST00000337331 ZNF468Q5VIY5 522 aaPredicted RBP14.22□□□□□ -0.13
NPHP3-201ENST00000337331 KMT5CQ86Y97 462 aa14.22□□□□□ -0.13
NPHP3-201ENST00000337331 ZNF764Q96H86 408 aaPredicted RBP14.22□□□□□ -0.13
NPHP3-201ENST00000337331 REEP6Q96HR9 211 aa14.22□□□□□ -0.13
NPHP3-201ENST00000337331 CCKARP32238 428 aa14.22□□□□□ -0.13
NPHP3-201ENST00000337331 SUMO3P55854 103 aaPredicted RBP14.22□□□□□ -0.13
NPHP3-201ENST00000337331 Q6ZN92 141 aa14.22□□□□□ -0.13
NPHP3-201ENST00000337331 OR1P1Q8NH06 330 aa14.22□□□□□ -0.13
NPHP3-201ENST00000337331 WBP1Q96G27 269 aa14.22□□□□□ -0.13
NPHP3-201ENST00000337331 MENTQ9BUN1 341 aa14.22□□□□□ -0.13
NPHP3-201ENST00000337331 ZNF552Q9H707 407 aaPredicted RBP14.22□□□□□ -0.13
NPHP3-201ENST00000337331 SLC2A9Q9NRM0 540 aa14.22□□□□□ -0.13
NPHP3-201ENST00000337331 B3GAT1Q9P2W7 334 aa14.22□□□□□ -0.13
NPHP3-201ENST00000337331 RAMP1O60894 148 aa14.22□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.7 ms