RNA–Protein interactions for RNA: ENST00000337299.6

COL2A1-201, Transcript of collagen type II alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL2A1, Length 4,257 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL2A1-201ENST00000337299 NKX2-6A6NCS4 301 aa11.71□□□□□ -0.54
COL2A1-201ENST00000337299 CD81P60033 236 aa11.71□□□□□ -0.54
COL2A1-201ENST00000337299 SRYQ05066 204 aa11.71□□□□□ -0.54
COL2A1-201ENST00000337299 PNRC1Q12796 327 aaPredicted RBP11.71□□□□□ -0.54
COL2A1-201ENST00000337299 MSMO1Q15800 293 aa11.71□□□□□ -0.54
COL2A1-201ENST00000337299 ZNF684Q5T5D7 378 aa11.71□□□□□ -0.54
COL2A1-201ENST00000337299 Q8WTZ3 238 aa11.71□□□□□ -0.54
COL2A1-201ENST00000337299 NTNG2Q96CW9 530 aa11.71□□□□□ -0.54
COL2A1-201ENST00000337299 CIB3Q96Q77 187 aaPredicted RBP11.71□□□□□ -0.54
COL2A1-201ENST00000337299 MCTS1Q9ULC4 181 aaKnown RBP11.71□□□□□ -0.54
COL2A1-201ENST00000337299 DTX4Q9Y2E6 619 aa11.71□□□□□ -0.54
COL2A1-201ENST00000337299 M0QZK8 103 aa11.71□□□□□ -0.54
COL2A1-201ENST00000337299 M0R135 149 aa11.71□□□□□ -0.54
COL2A1-201ENST00000337299 KLF4O43474 513 aa11.71□□□□□ -0.54
COL2A1-201ENST00000337299 CHST1O43916 411 aa11.71□□□□□ -0.54
COL2A1-201ENST00000337299 GGCTO75223 188 aaKnown RBP11.71□□□□□ -0.54
COL2A1-201ENST00000337299 RTL10Q7L3V2 364 aa11.71□□□□□ -0.54
COL2A1-201ENST00000337299 GJC3Q8NFK1 279 aa11.71□□□□□ -0.54
COL2A1-201ENST00000337299 ZNF799Q96GE5 643 aa11.71□□□□□ -0.54
COL2A1-201ENST00000337299 GFI1Q99684 422 aa11.71□□□□□ -0.54
COL2A1-201ENST00000337299 ZNF552Q9H707 407 aaPredicted RBP11.71□□□□□ -0.54
COL2A1-201ENST00000337299 CUTCQ9NTM9 273 aa11.71□□□□□ -0.54
COL2A1-201ENST00000337299 SDK2Q58EX2 2172 aa11.71□□□□□ -0.54
COL2A1-201ENST00000337299 IGHV3-9P01782 118 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 CD79AP11912 226 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 ZNF708P17019 499 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 OR10J1P30954 320 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 CCKARP32238 428 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 ZNF117Q03924 483 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 ZNF468Q5VIY5 522 aaPredicted RBP11.7□□□□□ -0.54
COL2A1-201ENST00000337299 CATSPERDQ86XM0 798 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 RAB24Q969Q5 203 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 OR2A5Q96R48 311 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 GPHA2Q96T91 129 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 Q9N2K0 584 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 KIAA1456Q9P272 454 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 SERGEFQ9UGK8 458 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 ZNF318Q5VUA4 2279 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 PIGBOS1A0A0B4J2F0 54 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 IGKV1-8A0A0C4DH67 115 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 DHRS7CA6NNS2 312 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 GAPDHP04406 335 aaKnown RBP11.7□□□□□ -0.54
COL2A1-201ENST00000337299 RABIFP47224 123 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 FAM3BP58499 235 aaPredicted RBP11.7□□□□□ -0.54
COL2A1-201ENST00000337299 SLC25A26Q70HW3 274 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 C16orf82Q7Z2V1 217 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 MRGPRX3Q96LB0 322 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 CTDSP1Q9GZU7 261 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 NBASA2RRP1 2371 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 TRBV11-1A0A0K0K1C0 115 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 CLEC18AA5D8T8 446 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 DTYMKP23919 212 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 GGTLC2Q14390 218 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 CLEC18CQ8NCF0 446 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 OR11L1Q8NGX0 322 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 OR2AE1Q8NHA4 323 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 BAHD1Q8TBE0 780 aaPredicted RBP11.7□□□□□ -0.54
COL2A1-201ENST00000337299 RNF126Q9BV68 326 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 HDAC8Q9BY41 377 aa11.7□□□□□ -0.54
COL2A1-201ENST00000337299 PRAMEF26H0Y7S4 382 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 FCN1O00602 326 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 ATXN7O15265 892 aaPredicted RBP11.69□□□□□ -0.54
COL2A1-201ENST00000337299 HSBP1O75506 76 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 KLHDC1Q8N7A1 406 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 ACTR3CQ9C0K3 210 aaPredicted RBP11.69□□□□□ -0.54
COL2A1-201ENST00000337299 SLC2A9Q9NRM0 540 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 ANXA10Q9UJ72 324 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 HIST1H2BKO60814 126 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 MT-CO2P00403 227 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 HIST1H2BJP06899 126 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 CTSDP07339 412 aaPredicted RBP11.69□□□□□ -0.54
COL2A1-201ENST00000337299 HIST1H2BOP23527 126 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 HIST1H2BBP33778 126 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 HIST1H2BDP58876 126 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 HIST1H2BCP62807 126 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 RAB31Q13636 194 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 HIST2H2BEQ16778 126 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 HIST2H2BFQ5QNW6 126 aaPredicted RBP11.69□□□□□ -0.54
COL2A1-201ENST00000337299 COL5A1-AS1Q5SY13 56 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 C16orf47Q6ZP98 133 aaPredicted RBP11.69□□□□□ -0.54
COL2A1-201ENST00000337299 ZNF808Q8N4W9 903 aaPredicted RBP11.69□□□□□ -0.54
COL2A1-201ENST00000337299 HIST1H2BHQ93079 126 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 HIST1H2BNQ99877 126 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 HIST1H2BMQ99879 126 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 MDC1Q14676 2089 aaKnown RBP11.69□□□□□ -0.54
COL2A1-201ENST00000337299 A6NNC1 897 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 FGF16O43320 207 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 DEDDO75618 318 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 CRISP2P16562 243 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 GRB2P62993 217 aaKnown RBP11.69□□□□□ -0.54
COL2A1-201ENST00000337299 C17orf67Q0P5P2 114 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 LINC01590Q5TEZ4 76 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 OR5L2Q8NGL0 311 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 ZNF764Q96H86 408 aaPredicted RBP11.69□□□□□ -0.54
COL2A1-201ENST00000337299 PECRQ9BY49 303 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 MTCH1Q9NZJ7 389 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 NAT8BQ9UHF3 227 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 NAGKQ9UJ70 344 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 RNF150Q9ULK6 438 aa11.69□□□□□ -0.54
COL2A1-201ENST00000337299 C3orf85A0A1B0GTC6 90 aa11.69□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 192.3 ms