RNA–Protein interactions for RNA: ENST00000336904.7

SNCA-201, Transcript of synuclein alpha, humanhuman

APPRIS P1 TSL 2 BASIC

Gene SNCA, Length 3,041 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Synapse .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNCA-201ENST00000336904 FBLN5Q9UBX5 448 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 SLC7A11Q9UPY5 501 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 RFNGQ9Y644 331 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 ACACAQ13085 2346 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 OR6C65A6NJZ3 312 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 BCL2L11O43521 198 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 B3GALNT1O75752 331 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 RHBDL1O75783 438 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 C4BPBP20851 252 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 CA6P23280 308 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 CHATP28329 748 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 NUP62P37198 522 aaPredicted RBP7.62□□□□□ -1.19
SNCA-201ENST00000336904 DEFA5Q01523 94 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 LYZL2Q7Z4W2 148 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 LHFPL1Q86WI0 220 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 ARRDC1Q8N5I2 433 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 KCNRGQ8N5I3 272 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 CPNE2Q96FN4 548 aaPredicted RBP7.62□□□□□ -1.19
SNCA-201ENST00000336904 PARD6AQ9NPB6 346 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 AUP1Q9Y679 476 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 ARHGAP21Q5T5U3 1957 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 SCGNO76038 276 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 AGFG2O95081 481 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 IDH3GP51553 393 aaPredicted RBP7.62□□□□□ -1.19
SNCA-201ENST00000336904 TAS2R46P59540 309 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 CLPPQ16740 277 aaPredicted RBP7.62□□□□□ -1.19
SNCA-201ENST00000336904 PNLIPRP3Q17RR3 467 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 ZNF585AQ6P3V2 769 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 ACOT7LQ6ZUV0 252 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 CNEP1R1Q8N9A8 125 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 PXT1Q8NFP0 134 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 SPEF1Q9Y4P9 236 aa7.62□□□□□ -1.19
SNCA-201ENST00000336904 INTS1Q8N201 2190 aaKnown RBP7.61□□□□□ -1.19
SNCA-201ENST00000336904 ZNF816-ZNF321PA0A0X1KG74 233 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 DBX1A6NMT0 343 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 SERPINE3A8MV23 424 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 APOC1P02654 83 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 SCTP09683 121 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 NAT1P18440 290 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 WNT5AP41221 380 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 SOX8P57073 446 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 IKZF1Q13422 519 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 RBM39Q14498 530 aaKnown RBP7.61□□□□□ -1.19
SNCA-201ENST00000336904 SPIN3Q5JUX0 258 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 SECTM1Q8WVN6 248 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 TM2D1Q9BX74 207 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 ABI3Q9P2A4 366 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 POLEQ07864 2286 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 NBASA2RRP1 2371 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 TERTO14746 1132 aaKnown RBP7.61□□□□□ -1.19
SNCA-201ENST00000336904 PRKACAP17612 351 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 M6PRP20645 277 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 AADACP22760 399 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 AGTR1P30556 359 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 CEBPDP49716 269 aaPredicted RBP7.61□□□□□ -1.19
SNCA-201ENST00000336904 FGL1Q08830 312 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 SLC10A1Q14973 349 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 ABCA11PQ4W5N1 156 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 ZNF766Q5HY98 468 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 RPL7L1Q6DKI1 246 aaKnown RBP7.61□□□□□ -1.19
SNCA-201ENST00000336904 FAM53AQ6NSI3 398 aaPredicted RBP7.61□□□□□ -1.19
SNCA-201ENST00000336904 GLRX5Q86SX6 157 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 MDP1Q86V88 176 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 FDCSPQ8NFU4 85 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 SPSB1Q96BD6 273 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 MTCH1Q9NZJ7 389 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 CUL9Q8IWT3 2517 aa7.61□□□□□ -1.19
SNCA-201ENST00000336904 HEATR1Q9H583 2144 aaKnown RBP7.6□□□□□ -1.19
SNCA-201ENST00000336904 IL18BPO95998 194 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 IFNA2P01563 188 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 ZNF728P0DKX0 622 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 NME2P22392 152 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 RBM11P57052 281 aaKnown RBP7.6□□□□□ -1.19
SNCA-201ENST00000336904 PCBD1P61457 104 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 AIMP2Q13155 320 aaKnown RBP7.6□□□□□ -1.19
SNCA-201ENST00000336904 SNTB1Q13884 538 aaKnown RBP7.6□□□□□ -1.19
SNCA-201ENST00000336904 IZUMO4Q1ZYL8 232 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 GGNBP1Q5YKI7 109 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 C20orf204Q6ZNR8 217 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 LHFPL2Q6ZUX7 228 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 IL1F10Q8WWZ1 152 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 MRPS24Q96EL2 167 aaKnown RBP7.6□□□□□ -1.19
SNCA-201ENST00000336904 ARPC5LQ9BPX5 153 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 ZPBPQ9BS86 351 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 ZNF107Q9UII5 783 aaPredicted RBP7.6□□□□□ -1.19
SNCA-201ENST00000336904 KIF25Q9UIL4 384 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 PCDHB10Q9UN67 800 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 FAM96BQ9Y3D0 163 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 APC2O95996 2303 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 A0A0D9SG52 128 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 HSD17B6O14756 317 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 PHF1O43189 567 aaPredicted RBP7.6□□□□□ -1.19
SNCA-201ENST00000336904 PRKACBP22694 351 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 CALCRP30988 508 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 TAS2R31P59538 309 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 MALLQ13021 153 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 PLEKHN1Q494U1 663 aaPredicted RBP7.6□□□□□ -1.19
SNCA-201ENST00000336904 AKIRIN2Q53H80 203 aa7.6□□□□□ -1.19
SNCA-201ENST00000336904 PEG10Q86TG7 708 aaKnown RBP7.6□□□□□ -1.19
SNCA-201ENST00000336904 BVESQ8NE79 360 aa7.6□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms