RNA–Protein interactions for RNA: ENST00000335551.11

CSMD1-201, Transcript of CUB and Sushi multiple domains 1, humanhuman

TSL 1 (best)

Gene CSMD1, Length 12,134 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-201ENST00000335551 LAT2Q9GZY6 243 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 MRPS2Q9Y399 296 aaKnown RBP5.55□□□□□ -1.52
CSMD1-201ENST00000335551 PRSS21Q9Y6M0 314 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 SORL1Q92673 2214 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 SFT2D2O95562 160 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 ARG1P05089 322 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 CA3P07451 260 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 SHISA6Q6ZSJ9 500 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 OR8B3Q8NGG8 313 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 RPEQ96AT9 228 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 SGK494Q96LW2 274 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 THYN1Q9P016 225 aa5.55□□□□□ -1.52
CSMD1-201ENST00000335551 DUSP8Q13202 625 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 CIRBPQ14011 172 aaKnown RBP5.54□□□□□ -1.52
CSMD1-201ENST00000335551 SSX8Q7RTT4 187 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 MISP3Q96FF7 219 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 AKR7A3O95154 331 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 HLA-DQA1P01909 254 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 WNT1P04628 370 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 THBS4P35443 961 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 HAAOP46952 286 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 FHITP49789 147 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 SLC37A1P57057 533 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 SLC25A35Q3KQZ1 300 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 OR52N5Q8NH56 324 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 SNRNP40Q96DI7 357 aaKnown RBP5.54□□□□□ -1.52
CSMD1-201ENST00000335551 DERL3Q96Q80 235 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 BTAF1O14981 1849 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 ST6GAL1P15907 406 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 DCAF12Q5T6F0 453 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 WBP2Q969T9 261 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 PDXPQ96GD0 296 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 RHOVQ96L33 236 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 ELF5Q9UKW6 265 aaPredicted RBP5.54□□□□□ -1.52
CSMD1-201ENST00000335551 M0QZQ0 153 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 HPXP02790 462 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 CYB561P49447 251 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 SLC25A1P53007 311 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 ELAVL1Q15717 326 aaKnown RBP5.54□□□□□ -1.52
CSMD1-201ENST00000335551 SLC25A26Q70HW3 274 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 FBXL6Q8N531 539 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 ARIH2OSQ8N7S6 290 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 SPSB1Q96BD6 273 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 LOC105378220A0A1B0GUY1 285 aaPredicted RBP5.54□□□□□ -1.52
CSMD1-201ENST00000335551 TLCD2A6NGC4 264 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 H3BP45 60 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 GSTZ1O43708 216 aaPredicted RBP5.54□□□□□ -1.52
CSMD1-201ENST00000335551 CTSCP53634 463 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 ZNF121P58317 390 aaPredicted RBP5.54□□□□□ -1.52
CSMD1-201ENST00000335551 PRDX4Q13162 271 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 OR1B1Q8NGR6 318 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 PHOSPHO2Q8TCD6 241 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 RBPJLQ9UBG7 517 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.54□□□□□ -1.52
CSMD1-201ENST00000335551 C5orf49A4QMS7 147 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 M0R296 226 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 TAPBPO15533 448 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 RPL18Q07020 188 aaKnown RBP5.54□□□□□ -1.52
CSMD1-201ENST00000335551 LRRC10Q5BKY1 277 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 RIMKLAQ8IXN7 391 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 KTI12Q96EK9 354 aaPredicted RBP5.54□□□□□ -1.52
CSMD1-201ENST00000335551 RBM14Q96PK6 669 aaKnown RBP5.54□□□□□ -1.52
CSMD1-201ENST00000335551 TMEM70Q9BUB7 260 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 C20orf27Q9GZN8 174 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 KCNK7Q9Y2U2 307 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 CTAG2O75638 210 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 COL8A1P27658 744 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 TMEM33P57088 247 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 C1orf220Q5T0J3 134 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 OR13G1Q8NGZ3 307 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 UBE2FQ969M7 185 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 APOBEC3DQ96AK3 386 aaPredicted RBP5.54□□□□□ -1.52
CSMD1-201ENST00000335551 C19orf53Q9UNZ5 99 aaPredicted RBP5.54□□□□□ -1.52
CSMD1-201ENST00000335551 TCRBV16S1A1N1A0A5B0 115 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 CD1BP29016 333 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 KLF3P57682 345 aaPredicted RBP5.54□□□□□ -1.52
CSMD1-201ENST00000335551 FUT7Q11130 342 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 SLC16A11Q8NCK7 471 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 P2RY12Q9H244 342 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 DOCK1Q14185 1865 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 SNURFLB1AK76 121 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 SCRG1O75711 98 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 PPIAP62937 165 aaKnown RBP5.54□□□□□ -1.52
CSMD1-201ENST00000335551 TEX29Q8N6K0 151 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 ZC3HAV1LQ96H79 300 aaKnown RBP5.54□□□□□ -1.52
CSMD1-201ENST00000335551 MS4A3Q96HJ5 214 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 TEX37Q96LM6 180 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 HSPB9Q9BQS6 159 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 TMEM208Q9BTX3 173 aa5.54□□□□□ -1.52
CSMD1-201ENST00000335551 PARP14Q460N5 1801 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 TRBV9A0A0B4J1U6 114 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 MBLAC1A4D2B0 266 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-201ENST00000335551 OR4C45A6NMZ5 311 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 GABRA1P14867 456 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 ARF6P62330 175 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 COL9A3Q14050 684 aaPredicted RBP5.53□□□□□ -1.52
CSMD1-201ENST00000335551 MAMSTRQ6ZN01 415 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 OXGR1Q96P68 337 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 TMEM140Q9NV12 185 aa5.53□□□□□ -1.52
CSMD1-201ENST00000335551 H7C2G1 150 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms