RNA–Protein interactions for RNA: ENST00000334859.8

LRCH3-201, Transcript of leucine rich repeats and calponin homology domain containing 3, humanhuman

TSL 1 (best) BASIC

Gene LRCH3, Length 2,258 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRCH3-201ENST00000334859 TMEM218A2RU14 115 aa15.3■□□□□ 0.04
LRCH3-201ENST00000334859 ATG12O94817 140 aa15.3■□□□□ 0.04
LRCH3-201ENST00000334859 HLA-HP01893 362 aa15.3■□□□□ 0.04
LRCH3-201ENST00000334859 GLI4P10075 376 aa15.3■□□□□ 0.04
LRCH3-201ENST00000334859 ITGA3P26006 1051 aa15.3■□□□□ 0.04
LRCH3-201ENST00000334859 RPL12P30050 165 aaKnown RBP15.3■□□□□ 0.04
LRCH3-201ENST00000334859 EIF5AP63241 154 aaKnown RBP15.3■□□□□ 0.04
LRCH3-201ENST00000334859 OR56B2PQ8NGI1 322 aa15.3■□□□□ 0.04
LRCH3-201ENST00000334859 ADAMTS17Q8TE56 1095 aa15.3■□□□□ 0.04
LRCH3-201ENST00000334859 IGKV3D-15A0A087WSY6 115 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 FAM74A7A6NL05 159 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 LINC01387J3KSC0 135 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 ABCD4O14678 606 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 TAAR5O14804 337 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 LRP3O75074 770 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 DEDDO75618 318 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 FAM157CP0CG43 387 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 GLP1RP43220 463 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 MAGEA5P43359 124 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 NPBWR2P48146 333 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 FAM74A3Q4VXF1 159 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 TUSC5Q8IXB3 177 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 SPSB4Q96A44 273 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 SLC2A9Q9NRM0 540 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 TUBD1Q9UJT1 453 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 C5orf49A4QMS7 147 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 TRIM77I1YAP6 450 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 GPR31O00270 319 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 SYNGR4O95473 234 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 CLDN18P56856 261 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 OR1C1Q15619 314 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 EIF5AL1Q6IS14 154 aaKnown RBP15.29■□□□□ 0.04
LRCH3-201ENST00000334859 LINC00696Q6ZRV3 163 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 OR5T2Q8NGG2 359 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 SMIM3Q9BZL3 60 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 HRH4Q9H3N8 390 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 MMP26Q9NRE1 261 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 PLA2G3Q9NZ20 509 aa15.29■□□□□ 0.04
LRCH3-201ENST00000334859 FAM186AA6NE01 2351 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 LNP1A1A4G5 178 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 DNASE2O00115 360 aaPredicted RBP15.28■□□□□ 0.04
LRCH3-201ENST00000334859 ZNF883P0CG24 379 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 FUT3P21217 361 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 HERV-K104P61576 105 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 SRSF3P84103 164 aaKnown RBP15.28■□□□□ 0.04
LRCH3-201ENST00000334859 SPEM2Q0P670 501 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 NRN1LQ496H8 165 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 PRRX2Q99811 253 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 PRRG4Q9BZD6 226 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 TMEM231Q9H6L2 316 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 TREM1Q9NP99 234 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 ABI3Q9P2A4 366 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 FBXL17Q9UF56 701 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 SHANK1Q9Y566 2161 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 CDK2AP1O14519 115 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 ADCYAP1P18509 176 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 TMEM187Q14656 261 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 ZNF169Q14929 603 aaPredicted RBP15.28■□□□□ 0.04
LRCH3-201ENST00000334859 OR4A4PQ8NGN8 299 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 TTTY12Q9BZ98 90 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 STARD10Q9Y365 291 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 ZNF407Q9C0G0 2248 aa15.28■□□□□ 0.04
LRCH3-201ENST00000334859 FBXO24O75426 580 aa15.27■□□□□ 0.04
LRCH3-201ENST00000334859 MED6O75586 246 aa15.27■□□□□ 0.04
LRCH3-201ENST00000334859 NME2P22392 152 aa15.27■□□□□ 0.04
LRCH3-201ENST00000334859 FOXG1P55316 489 aaPredicted RBP15.27■□□□□ 0.04
LRCH3-201ENST00000334859 GUCA2BQ16661 112 aa15.27■□□□□ 0.04
LRCH3-201ENST00000334859 TMEM164Q5U3C3 297 aa15.27■□□□□ 0.04
LRCH3-201ENST00000334859 DBX2Q6ZNG2 339 aa15.27■□□□□ 0.04
LRCH3-201ENST00000334859 Q6ZPA2 131 aa15.27■□□□□ 0.04
LRCH3-201ENST00000334859 MRPL21Q7Z2W9 205 aaKnown RBP15.27■□□□□ 0.04
LRCH3-201ENST00000334859 LYZL2Q7Z4W2 148 aa15.27■□□□□ 0.04
LRCH3-201ENST00000334859 SVBPQ8N300 66 aa15.27■□□□□ 0.04
LRCH3-201ENST00000334859 OR11L1Q8NGX0 322 aa15.27■□□□□ 0.04
LRCH3-201ENST00000334859 SLAMF9Q96A28 289 aa15.27■□□□□ 0.04
LRCH3-201ENST00000334859 SPRY4Q9C004 299 aa15.27■□□□□ 0.04
LRCH3-201ENST00000334859 ATPIF1Q9UII2 106 aa15.27■□□□□ 0.04
LRCH3-201ENST00000334859 DNAJC13O75165 2243 aa15.27■□□□□ 0.04
LRCH3-201ENST00000334859 A0A1W2PNU3 283 aaPredicted RBP15.27■□□□□ 0.03
LRCH3-201ENST00000334859 NUDT19A8MXV4 375 aa15.27■□□□□ 0.03
LRCH3-201ENST00000334859 F8W036 122 aa15.27■□□□□ 0.03
LRCH3-201ENST00000334859 DIRAS3O95661 229 aa15.27■□□□□ 0.03
LRCH3-201ENST00000334859 GPM6AP51674 278 aa15.27■□□□□ 0.03
LRCH3-201ENST00000334859 BLOC1S1P78537 153 aa15.27■□□□□ 0.03
LRCH3-201ENST00000334859 PLGLB1Q02325 96 aa15.27■□□□□ 0.03
LRCH3-201ENST00000334859 PRDX4Q13162 271 aa15.27■□□□□ 0.03
LRCH3-201ENST00000334859 COLCA1Q6ZS62 124 aa15.27■□□□□ 0.03
LRCH3-201ENST00000334859 MOB3AQ96BX8 217 aa15.27■□□□□ 0.03
LRCH3-201ENST00000334859 GALNT14Q96FL9 552 aa15.27■□□□□ 0.03
LRCH3-201ENST00000334859 SUCNR1Q9BXA5 334 aa15.27■□□□□ 0.03
LRCH3-201ENST00000334859 LINC00470Q9BZP3 86 aa15.27■□□□□ 0.03
LRCH3-201ENST00000334859 ZNF629Q9UEG4 869 aaPredicted RBP15.27■□□□□ 0.03
LRCH3-201ENST00000334859 CST4P01036 141 aa15.26■□□□□ 0.03
LRCH3-201ENST00000334859 BCL3P20749 454 aa15.26■□□□□ 0.03
LRCH3-201ENST00000334859 AADACP22760 399 aa15.26■□□□□ 0.03
LRCH3-201ENST00000334859 HAAOP46952 286 aa15.26■□□□□ 0.03
LRCH3-201ENST00000334859 TMEM33P57088 247 aa15.26■□□□□ 0.03
LRCH3-201ENST00000334859 MST1LQ2TV78 715 aa15.26■□□□□ 0.03
LRCH3-201ENST00000334859 DCAF10Q5QP82 559 aa15.26■□□□□ 0.03
LRCH3-201ENST00000334859 PUSL1Q8N0Z8 303 aaKnown RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms