RNA–Protein interactions for RNA: ENST00000334527.11

NDEL1-201, Transcript of nudE neurodevelopment protein 1 like 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NDEL1, Length 2,372 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDEL1-201ENST00000334527 LYZL2Q7Z4W2 148 aa20.22■□□□□ 0.83
NDEL1-201ENST00000334527 CALHM1Q8IU99 346 aa20.22■□□□□ 0.83
NDEL1-201ENST00000334527 SPAG16Q8N0X2 631 aa20.22■□□□□ 0.83
NDEL1-201ENST00000334527 BATF2Q8N1L9 274 aa20.22■□□□□ 0.83
NDEL1-201ENST00000334527 NRIP2Q9BQI9 281 aa20.22■□□□□ 0.83
NDEL1-201ENST00000334527 SMOC1Q9H4F8 434 aa20.22■□□□□ 0.83
NDEL1-201ENST00000334527 SERPINA7P05543 415 aa20.21■□□□□ 0.83
NDEL1-201ENST00000334527 SSPNQ14714 243 aa20.21■□□□□ 0.83
NDEL1-201ENST00000334527 CPEB3Q8NE35 698 aaKnown RBP20.21■□□□□ 0.83
NDEL1-201ENST00000334527 SUCNR1Q9BXA5 334 aa20.21■□□□□ 0.83
NDEL1-201ENST00000334527 PLEKHA2Q9HB19 425 aa20.21■□□□□ 0.83
NDEL1-201ENST00000334527 RYDENQ9NUL5 291 aaKnown RBP20.21■□□□□ 0.83
NDEL1-201ENST00000334527 PLA2G2EQ9NZK7 142 aa20.21■□□□□ 0.83
NDEL1-201ENST00000334527 MRPS18CQ9Y3D5 142 aaKnown RBP20.21■□□□□ 0.83
NDEL1-201ENST00000334527 LOXL2Q9Y4K0 774 aa20.21■□□□□ 0.83
NDEL1-201ENST00000334527 SNAPINO95295 136 aa20.21■□□□□ 0.83
NDEL1-201ENST00000334527 C1QTNF5Q9BXJ0 243 aa20.21■□□□□ 0.83
NDEL1-201ENST00000334527 ZNF442Q9H7R0 627 aa20.21■□□□□ 0.83
NDEL1-201ENST00000334527 P4HTMQ9NXG6 502 aa20.21■□□□□ 0.83
NDEL1-201ENST00000334527 PCSK5Q92824 1860 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 CLEC9AQ6UXN8 241 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 Q6ZPA2 131 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 LIAT1Q6ZQX7 453 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 ZNF611Q8N823 705 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 ERGIC1Q969X5 290 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 TECTBQ96PL2 329 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 PARPBPQ9NWS1 579 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 RCC2Q9P258 522 aaKnown RBP20.2■□□□□ 0.82
NDEL1-201ENST00000334527 NOSIPQ9Y314 301 aaKnown RBP20.2■□□□□ 0.82
NDEL1-201ENST00000334527 E5RGE8 158 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 AGPAT2O15120 278 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 OR7C1O76099 320 aaPredicted RBP20.2■□□□□ 0.82
NDEL1-201ENST00000334527 DIRAS3O95661 229 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 NPBWR1P48145 328 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 SPINK14Q6IE38 97 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 BTNL8Q6UX41 500 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 SLC25A26Q70HW3 274 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 LRTM2Q8N967 370 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 OR11L1Q8NGX0 322 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 SPSB4Q96A44 273 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 MOB3AQ96BX8 217 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 NDRG3Q9UGV2 375 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 NSG2Q9Y328 171 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 STARD10Q9Y365 291 aa20.2■□□□□ 0.82
NDEL1-201ENST00000334527 H2AFB1P0C5Y9 115 aa20.19■□□□□ 0.82
NDEL1-201ENST00000334527 FUT3P21217 361 aa20.19■□□□□ 0.82
NDEL1-201ENST00000334527 GLP1RP43220 463 aa20.19■□□□□ 0.82
NDEL1-201ENST00000334527 FOXO1Q12778 655 aa20.19■□□□□ 0.82
NDEL1-201ENST00000334527 SLC23A3Q6PIS1 610 aa20.19■□□□□ 0.82
NDEL1-201ENST00000334527 C18orf12Q96KH6 178 aa20.19■□□□□ 0.82
NDEL1-201ENST00000334527 PARP11Q9NR21 331 aa20.19■□□□□ 0.82
NDEL1-201ENST00000334527 RNASEK-C17orf49H0YIS7 233 aa20.19■□□□□ 0.82
NDEL1-201ENST00000334527 MRPL33O75394 65 aaKnown RBP20.19■□□□□ 0.82
NDEL1-201ENST00000334527 NPBWR2P48146 333 aa20.19■□□□□ 0.82
NDEL1-201ENST00000334527 DHRS7BQ6IAN0 325 aaPredicted RBP20.19■□□□□ 0.82
NDEL1-201ENST00000334527 PSMF1Q92530 271 aa20.19■□□□□ 0.82
NDEL1-201ENST00000334527 TMEM45BQ96B21 275 aa20.19■□□□□ 0.82
NDEL1-201ENST00000334527 SYT3Q9BQG1 590 aa20.19■□□□□ 0.82
NDEL1-201ENST00000334527 PRDM14Q9GZV8 571 aa20.19■□□□□ 0.82
NDEL1-201ENST00000334527 H7C1Q1 480 aa20.18■□□□□ 0.82
NDEL1-201ENST00000334527 H7C2Y5 167 aa20.18■□□□□ 0.82
NDEL1-201ENST00000334527 ID4P47928 161 aa20.18■□□□□ 0.82
NDEL1-201ENST00000334527 HERV-K104P61576 105 aa20.18■□□□□ 0.82
NDEL1-201ENST00000334527 FLI1Q01543 452 aaPredicted RBP20.18■□□□□ 0.82
NDEL1-201ENST00000334527 TMEM211Q6ICI0 200 aa20.18■□□□□ 0.82
NDEL1-201ENST00000334527 Q6ZRG5 221 aa20.18■□□□□ 0.82
NDEL1-201ENST00000334527 GLYATL2Q8WU03 294 aa20.18■□□□□ 0.82
NDEL1-201ENST00000334527 LRFN1Q9P244 771 aa20.18■□□□□ 0.82
NDEL1-201ENST00000334527 BOKQ9UMX3 212 aaPredicted RBP20.18■□□□□ 0.82
NDEL1-201ENST00000334527 PVALBP20472 110 aaPredicted RBP20.17■□□□□ 0.82
NDEL1-201ENST00000334527 AADACP22760 399 aa20.17■□□□□ 0.82
NDEL1-201ENST00000334527 RFC3P40938 356 aa20.17■□□□□ 0.82
NDEL1-201ENST00000334527 SRYQ05066 204 aa20.17■□□□□ 0.82
NDEL1-201ENST00000334527 DAZAP2Q15038 168 aaPredicted RBP20.17■□□□□ 0.82
NDEL1-201ENST00000334527 HFEQ30201 348 aa20.17■□□□□ 0.82
NDEL1-201ENST00000334527 C9orf135Q5VTT2 229 aa20.17■□□□□ 0.82
NDEL1-201ENST00000334527 LGI3Q8N145 548 aa20.17■□□□□ 0.82
NDEL1-201ENST00000334527 UBAC2Q8NBM4 344 aa20.17■□□□□ 0.82
NDEL1-201ENST00000334527 MSI2Q96DH6 328 aaKnown RBP20.17■□□□□ 0.82
NDEL1-201ENST00000334527 BSCL2Q96G97 398 aaPredicted RBP20.17■□□□□ 0.82
NDEL1-201ENST00000334527 PHF1O43189 567 aaPredicted RBP20.17■□□□□ 0.82
NDEL1-201ENST00000334527 SFTA3P0C7M3 94 aa20.17■□□□□ 0.82
NDEL1-201ENST00000334527 ACP1P24666 158 aa20.17■□□□□ 0.82
NDEL1-201ENST00000334527 F2RL1P55085 397 aa20.17■□□□□ 0.82
NDEL1-201ENST00000334527 UCP3P55916 312 aa20.17■□□□□ 0.82
NDEL1-201ENST00000334527 LPAL2Q16609 132 aa20.17■□□□□ 0.82
NDEL1-201ENST00000334527 THOC3Q96J01 351 aaKnown RBP20.17■□□□□ 0.82
NDEL1-201ENST00000334527 SLC7A10Q9NS82 523 aa20.17■□□□□ 0.82
NDEL1-201ENST00000334527 C19orf67A6NJJ6 358 aa20.16■□□□□ 0.82
NDEL1-201ENST00000334527 ZNHIT1O43257 154 aa20.16■□□□□ 0.82
NDEL1-201ENST00000334527 CCNOP22674 350 aa20.16■□□□□ 0.82
NDEL1-201ENST00000334527 IL32P24001 234 aa20.16■□□□□ 0.82
NDEL1-201ENST00000334527 ARF1P84077 181 aaKnown RBP20.16■□□□□ 0.82
NDEL1-201ENST00000334527 SWI5Q1ZZU3 235 aa20.16■□□□□ 0.82
NDEL1-201ENST00000334527 OR52M1Q8NGK5 317 aa20.16■□□□□ 0.82
NDEL1-201ENST00000334527 RSRP1Q9BUV0 290 aa20.16■□□□□ 0.82
NDEL1-201ENST00000334527 PAPOLGQ9BWT3 736 aaKnown RBP20.16■□□□□ 0.82
NDEL1-201ENST00000334527 DUSP1P28562 367 aa20.16■□□□□ 0.82
NDEL1-201ENST00000334527 COL27A1Q8IZC6 1860 aaPredicted RBP20.15■□□□□ 0.82
NDEL1-201ENST00000334527 A0A096LPE4 126 aa20.15■□□□□ 0.82
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms