RNA–Protein interactions for RNA: ENST00000332858.10

TUBA1B-201, Transcript of tubulin alpha 1b, humanhuman

TSL 1 (best)

Gene TUBA1B, Length 3,198 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBA1B-201ENST00000332858 DEDDO75618 318 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 CCL2P13500 99 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 SPINK2P20155 84 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 B2MP61769 119 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 ARL6IP1Q15041 203 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 SPINK14Q6IE38 97 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 SLC22A25Q6T423 547 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 TMEM105Q8N8V8 129 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 CPT1CQ8TCG5 803 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 RTN4IP1Q8WWV3 396 aaPredicted RBP11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 MED13Q9UHV7 2174 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 hCG_38984A0A1B0GV85 526 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 FARS2O95363 451 aaKnown RBP11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 MBPP02686 304 aaPredicted RBP11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 PET100P0DJ07 73 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 TCN2P20062 427 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 PPA1Q15181 289 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 KRTAP27-1Q3LI81 207 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 TMEM268Q5VZI3 342 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 OR5L1Q8NGL2 311 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 HS3ST6Q96QI5 342 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 PRRX2Q99811 253 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 TUBD1Q9UJT1 453 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 TCFL5Q9UL49 500 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 HSF4Q9ULV5 492 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 GJE1A6NN92 205 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 ZNF728P0DKX0 622 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 FOXG1P55316 489 aaPredicted RBP11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 PDZK1IP1Q13113 114 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 TMEM187Q14656 261 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 ACER2Q5QJU3 275 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 ASCL4Q6XD76 172 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 OSR2Q8N2R0 312 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 GPR35Q9HC97 309 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 NECAP2Q9NVZ3 263 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 TIMM10BQ9Y5J6 103 aa11.61□□□□□ -0.55
TUBA1B-201ENST00000332858 CNN3Q15417 329 aaKnown RBP11.6□□□□□ -0.55
TUBA1B-201ENST00000332858 OR52M1Q8NGK5 317 aa11.6□□□□□ -0.55
TUBA1B-201ENST00000332858 CDX2Q99626 313 aaPredicted RBP11.6□□□□□ -0.55
TUBA1B-201ENST00000332858 MEMO1Q9Y316 297 aa11.6□□□□□ -0.55
TUBA1B-201ENST00000332858 VSTM5A8MXK1 200 aa11.6□□□□□ -0.55
TUBA1B-201ENST00000332858 C3orf80F5H4A9 247 aa11.6□□□□□ -0.55
TUBA1B-201ENST00000332858 CELA3AP09093 270 aa11.6□□□□□ -0.55
TUBA1B-201ENST00000332858 PLCXD3Q63HM9 321 aa11.6□□□□□ -0.55
TUBA1B-201ENST00000332858 RTL6Q6ICC9 239 aa11.6□□□□□ -0.55
TUBA1B-201ENST00000332858 TCEAL6Q6IPX3 200 aa11.6□□□□□ -0.55
TUBA1B-201ENST00000332858 OR2V1Q8NHB1 315 aa11.6□□□□□ -0.55
TUBA1B-201ENST00000332858 TCEAL3Q969E4 200 aa11.6□□□□□ -0.55
TUBA1B-201ENST00000332858 GPHA2Q96T91 129 aa11.6□□□□□ -0.55
TUBA1B-201ENST00000332858 NRIP2Q9BQI9 281 aa11.6□□□□□ -0.55
TUBA1B-201ENST00000332858 SLC2A9Q9NRM0 540 aa11.6□□□□□ -0.55
TUBA1B-201ENST00000332858 EDARQ9UNE0 448 aa11.6□□□□□ -0.55
TUBA1B-201ENST00000332858 CARHSP1Q9Y2V2 147 aaKnown RBP11.6□□□□□ -0.55
TUBA1B-201ENST00000332858 A0A096LPE4 126 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 A0A1W2PPZ6 126 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 GDF1P27539 372 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 CAV2P51636 162 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 SRYQ05066 204 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 TRA2AQ13595 282 aaKnown RBP eCLIP11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 HFEQ30201 348 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 ABLIM2Q6H8Q1 611 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 HAGHLQ6PII5 290 aaPredicted RBP11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 LHFPL2Q6ZUX7 228 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 WDR5BQ86VZ2 330 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 GLYATL2Q8WU03 294 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 NAA60Q9H7X0 242 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 WFDC1Q9HC57 220 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 ZDHHC8Q9ULC8 765 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 NOSIPQ9Y314 301 aaKnown RBP11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 MMP7P09237 267 aaPredicted RBP11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 OR8U9P0C7N5 309 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 CCNOP22674 350 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 FHITP49789 147 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 ETV3LQ6ZN32 361 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 LURAP1LQ8IV03 231 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 OR8U1Q8NH10 309 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 PSMF1Q92530 271 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 HES7Q9BYE0 225 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 RCC2Q9P258 522 aaKnown RBP11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 BDP1A6H8Y1 2624 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 MED19A0JLT2 244 aaPredicted RBP11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 OR7C1O76099 320 aaPredicted RBP11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 CST4P01036 141 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 IFNA21P01568 189 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 HOXA6P31267 233 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 CD80P33681 288 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 ABCA11PQ4W5N1 156 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 IL34Q6ZMJ4 242 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 SLC25A26Q70HW3 274 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 KCNE4Q8WWG9 221 aa11.59□□□□□ -0.55
TUBA1B-201ENST00000332858 RNASEK-C17orf49H0YIS7 233 aa11.58□□□□□ -0.56
TUBA1B-201ENST00000332858 DNPH1O43598 174 aa11.58□□□□□ -0.56
TUBA1B-201ENST00000332858 H2AFB1P0C5Y9 115 aa11.58□□□□□ -0.56
TUBA1B-201ENST00000332858 DTYMKP23919 212 aa11.58□□□□□ -0.56
TUBA1B-201ENST00000332858 SULT1A2P50226 295 aa11.58□□□□□ -0.56
TUBA1B-201ENST00000332858 ASCL1P50553 236 aa11.58□□□□□ -0.56
TUBA1B-201ENST00000332858 FOXO1Q12778 655 aa11.58□□□□□ -0.56
TUBA1B-201ENST00000332858 BTNL8Q6UX41 500 aa11.58□□□□□ -0.56
TUBA1B-201ENST00000332858 Q6ZRG5 221 aa11.58□□□□□ -0.56
TUBA1B-201ENST00000332858 CCDC54Q8NEL0 328 aa11.58□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms