RNA–Protein interactions for RNA: ENST00000328923.7

SHMT2-201, Transcript of serine hydroxymethyltransferase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHMT2, Length 2,537 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-201ENST00000328923 SGPP2Q8IWX5 399 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 TMEM123Q8N131 208 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 ZNF676Q8N7Q3 588 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 SNIP1Q8TAD8 396 aaKnown RBP10.39□□□□□ -0.75
SHMT2-201ENST00000328923 ADAP2Q9NPF8 381 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 KLHDC2Q9Y2U9 406 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 ATG2AQ2TAZ0 1938 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 GRXCR1A8MXD5 290 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 ZNF814B7Z6K7 855 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 ARPC3O15145 178 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 SPINT1O43278 529 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 LILRA1O75019 489 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 ZNF217O75362 1048 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 UPK3AO75631 287 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 MPZL1O95297 269 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 DDAH2O95865 285 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 RAB38P57729 211 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 ZNF92Q03936 586 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 TCEAL5Q5H9L2 206 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 C16orf82Q7Z2V1 217 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 FAM216AQ8WUB2 273 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 RSPRY1Q96DX4 576 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 DCBLD2Q96PD2 775 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 KXD1Q9BQD3 176 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 CGGBP1Q9UFW8 167 aaPredicted RBP10.39□□□□□ -0.75
SHMT2-201ENST00000328923 ENTPD2Q9Y5L3 495 aa10.39□□□□□ -0.75
SHMT2-201ENST00000328923 BLACEA4D250 179 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 HSPB2A8KAH6 182 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 GPR137BO60478 399 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 CA3P07451 260 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 CDK3Q00526 305 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 HSPB2Q16082 182 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 ACOT6Q3I5F7 207 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-201ENST00000328923 DCST2Q5T1A1 773 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 FAM166AQ6J272 317 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 RTN4RL2Q86UN3 420 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 CLDND2Q8NHS1 167 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 ZPLD1Q8TCW7 415 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 FAM3CQ92520 227 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 HIPK2Q9H2X6 1198 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 MRM2Q9UI43 246 aaKnown RBP10.38□□□□□ -0.75
SHMT2-201ENST00000328923 AK3Q9UIJ7 227 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 GPR132Q9UNW8 380 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 HIF3AQ9Y2N7 669 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 A0A0A6YYH2 397 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 A6NJ64 397 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 HYPMO75409 117 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 POU2F2P09086 479 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 EPHA8P29322 1005 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-201ENST00000328923 FAM3BP58499 235 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-201ENST00000328923 ARF6P62330 175 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 PLAURQ03405 335 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 PNRC1Q12796 327 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-201ENST00000328923 GLYATL3Q5SZD4 288 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 TMEM184AQ6ZMB5 413 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 CALHM1Q8IU99 346 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 TGIF2LYQ8IUE0 185 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 STXBP6Q8NFX7 210 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 OR2A1Q8NGT9 310 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 PTPMT1Q8WUK0 201 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-201ENST00000328923 TSEN15Q8WW01 171 aaKnown RBP10.38□□□□□ -0.75
SHMT2-201ENST00000328923 LPAR4Q99677 370 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 NRTNQ99748 197 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 NICN1Q9BSH3 213 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 SDF2L1Q9HCN8 221 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 LRP12Q9Y561 859 aa10.38□□□□□ -0.75
SHMT2-201ENST00000328923 METTL12A8MUP2 240 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 CORTO00230 105 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 GNG7O60262 68 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 SYNGR4O95473 234 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 ABHD16AO95870 558 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 DBHP09172 617 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 CISD3P0C7P0 127 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 STAG3L3P0CL85 134 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 GCH1P30793 250 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 CCKBRP32239 447 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 CNN3Q15417 329 aaKnown RBP10.37□□□□□ -0.75
SHMT2-201ENST00000328923 SPATA45Q537H7 98 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 PHF19Q5T6S3 580 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 ASPHD2Q6ICH7 369 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 SLC16A9Q7RTY1 509 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 OR2M7Q8NG81 312 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 OR2G3Q8NGZ4 309 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 FGGYQ96C11 551 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 CMKLR1Q99788 373 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 NUDT9Q9BW91 350 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 RAB11FIP5Q9BXF6 653 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 RXFP3Q9NSD7 469 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 UQCR10Q9UDW1 63 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 WIPI2Q9Y4P8 454 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 IER3IP1Q9Y5U9 82 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 EML5Q05BV3 1969 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 A0A1B0GWA3 101 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 ODAMA1E959 279 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 OR5B21A6NL26 309 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 TMEM212A6NML5 194 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 XRCC2O43543 280 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 ADH5P11766 374 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 RHOGP84095 191 aa10.37□□□□□ -0.75
SHMT2-201ENST00000328923 LINC01590Q5TEZ4 76 aa10.37□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 64.1 ms