RNA–Protein interactions for RNA: ENST00000322344.7

PNKP-201, Transcript of polynucleotide kinase 3'-phosphatase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PNKP, Length 2,041 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PNKP-201ENST00000322344 RFC3P40938 356 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 DEFA5Q01523 94 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 IL34Q6ZMJ4 242 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 SLC25A26Q70HW3 274 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 CALHM1Q8IU99 346 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 FAM71E2Q8N5Q1 922 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 MARS2Q96GW9 593 aaKnown RBP19.29■□□□□ 0.68
PNKP-201ENST00000322344 PRRX2Q99811 253 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 ZNF442Q9H7R0 627 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 CALHM2Q9HA72 323 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 LPAR3Q9UBY5 353 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 TMEM218A2RU14 115 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 SP9P0CG40 484 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 ATF4P18848 351 aaPredicted RBP19.29■□□□□ 0.68
PNKP-201ENST00000322344 CCDC71LQ8N9Z2 235 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 OR56B2PQ8NGI1 322 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 APOBEC3DQ96AK3 386 aaPredicted RBP19.29■□□□□ 0.68
PNKP-201ENST00000322344 IP6K3Q96PC2 410 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 PRRG4Q9BZD6 226 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 PLEKHA2Q9HB19 425 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 OR2S2Q9NQN1 319 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 ZFP57Q9NU63 452 aa19.29■□□□□ 0.68
PNKP-201ENST00000322344 GAPDHP04406 335 aaKnown RBP19.28■□□□□ 0.68
PNKP-201ENST00000322344 MAGEA5P43359 124 aa19.28■□□□□ 0.68
PNKP-201ENST00000322344 BRICD5Q6PL45 260 aa19.28■□□□□ 0.68
PNKP-201ENST00000322344 ATRAIDQ6UW56 229 aa19.28■□□□□ 0.68
PNKP-201ENST00000322344 FOXRED2Q8IWF2 684 aa19.28■□□□□ 0.68
PNKP-201ENST00000322344 PAPOLGQ9BWT3 736 aaKnown RBP19.28■□□□□ 0.68
PNKP-201ENST00000322344 HES7Q9BYE0 225 aa19.28■□□□□ 0.68
PNKP-201ENST00000322344 A0A1W2PNU3 283 aaPredicted RBP19.27■□□□□ 0.68
PNKP-201ENST00000322344 FAM166BA8MTA8 275 aa19.27■□□□□ 0.68
PNKP-201ENST00000322344 OR7C1O76099 320 aaPredicted RBP19.27■□□□□ 0.68
PNKP-201ENST00000322344 CST4P01036 141 aa19.27■□□□□ 0.68
PNKP-201ENST00000322344 CD59P13987 128 aa19.27■□□□□ 0.68
PNKP-201ENST00000322344 ARR3P36575 388 aa19.27■□□□□ 0.68
PNKP-201ENST00000322344 FXYD4P59646 89 aa19.27■□□□□ 0.68
PNKP-201ENST00000322344 HERV-K104P61576 105 aa19.27■□□□□ 0.68
PNKP-201ENST00000322344 PLGLB1Q02325 96 aa19.27■□□□□ 0.68
PNKP-201ENST00000322344 PRDX4Q13162 271 aa19.27■□□□□ 0.68
PNKP-201ENST00000322344 SRSF7Q16629 238 aaKnown RBP eCLIP19.27■□□□□ 0.68
PNKP-201ENST00000322344 SMUG1Q53HV7 270 aa19.27■□□□□ 0.68
PNKP-201ENST00000322344 LIAT1Q6ZQX7 453 aa19.27■□□□□ 0.68
PNKP-201ENST00000322344 Q6ZS49 121 aa19.27■□□□□ 0.68
PNKP-201ENST00000322344 MRPL21Q7Z2W9 205 aaKnown RBP19.27■□□□□ 0.68
PNKP-201ENST00000322344 TMEM251Q8N6I4 163 aa19.27■□□□□ 0.68
PNKP-201ENST00000322344 APH1AQ96BI3 265 aa19.27■□□□□ 0.68
PNKP-201ENST00000322344 TAF9BQ9HBM6 251 aa19.27■□□□□ 0.68
PNKP-201ENST00000322344 SLC2A9Q9NRM0 540 aa19.27■□□□□ 0.68
PNKP-201ENST00000322344 FAM86C1Q9NVL1 165 aa19.27■□□□□ 0.68
PNKP-201ENST00000322344 A0A096LPE4 126 aa19.27■□□□□ 0.67
PNKP-201ENST00000322344 A0A1W2PPZ6 126 aa19.27■□□□□ 0.67
PNKP-201ENST00000322344 FAM221AA4D161 298 aa19.27■□□□□ 0.67
PNKP-201ENST00000322344 ZNF705EA8MWA4 302 aaPredicted RBP19.27■□□□□ 0.67
PNKP-201ENST00000322344 OR5AC1P0C628 307 aa19.27■□□□□ 0.67
PNKP-201ENST00000322344 RNPS1Q15287 305 aaKnown RBP19.27■□□□□ 0.67
PNKP-201ENST00000322344 BOLLQ8N9W6 283 aaKnown RBP19.27■□□□□ 0.67
PNKP-201ENST00000322344 NKX6-2Q9C056 277 aaPredicted RBP19.27■□□□□ 0.67
PNKP-201ENST00000322344 OPA3Q9H6K4 179 aa19.27■□□□□ 0.67
PNKP-201ENST00000322344 PLSCR2Q9NRY7 297 aa19.27■□□□□ 0.67
PNKP-201ENST00000322344 C5orf49A4QMS7 147 aa19.26■□□□□ 0.67
PNKP-201ENST00000322344 H7C1Q1 480 aa19.26■□□□□ 0.67
PNKP-201ENST00000322344 JTBO76095 146 aa19.26■□□□□ 0.67
PNKP-201ENST00000322344 ATG12O94817 140 aa19.26■□□□□ 0.67
PNKP-201ENST00000322344 MT-CO3P00414 261 aa19.26■□□□□ 0.67
PNKP-201ENST00000322344 HLA-HP01893 362 aa19.26■□□□□ 0.67
PNKP-201ENST00000322344 RPL7L1Q6DKI1 246 aaKnown RBP19.26■□□□□ 0.67
PNKP-201ENST00000322344 ZDHHC23Q8IYP9 409 aa19.26■□□□□ 0.67
PNKP-201ENST00000322344 LGI3Q8N145 548 aa19.26■□□□□ 0.67
PNKP-201ENST00000322344 SMIM8Q96KF7 97 aa19.26■□□□□ 0.67
PNKP-201ENST00000322344 RSRP1Q9BUV0 290 aa19.26■□□□□ 0.67
PNKP-201ENST00000322344 KLF13Q9Y2Y9 288 aaPredicted RBP19.26■□□□□ 0.67
PNKP-201ENST00000322344 RTTNQ86VV8 2226 aa19.26■□□□□ 0.67
PNKP-201ENST00000322344 CCNOP22674 350 aa19.25■□□□□ 0.67
PNKP-201ENST00000322344 SPEM2Q0P670 501 aa19.25■□□□□ 0.67
PNKP-201ENST00000322344 CEACAM21Q3KPI0 293 aa19.25■□□□□ 0.67
PNKP-201ENST00000322344 C9orf135Q5VTT2 229 aa19.25■□□□□ 0.67
PNKP-201ENST00000322344 C18orf12Q96KH6 178 aa19.25■□□□□ 0.67
PNKP-201ENST00000322344 FBXO9Q9UK97 447 aaPredicted RBP19.25■□□□□ 0.67
PNKP-201ENST00000322344 LSM5Q9Y4Y9 91 aaKnown RBP19.25■□□□□ 0.67
PNKP-201ENST00000322344 E5RGE8 158 aa19.25■□□□□ 0.67
PNKP-201ENST00000322344 DNASE2O00115 360 aaPredicted RBP19.25■□□□□ 0.67
PNKP-201ENST00000322344 SS18L1O75177 396 aaPredicted RBP19.25■□□□□ 0.67
PNKP-201ENST00000322344 NPBWR2P48146 333 aa19.25■□□□□ 0.67
PNKP-201ENST00000322344 FGF12P61328 243 aa19.25■□□□□ 0.67
PNKP-201ENST00000322344 PJVKQ0ZLH3 352 aa19.25■□□□□ 0.67
PNKP-201ENST00000322344 PLA2G2CQ5R387 149 aa19.25■□□□□ 0.67
PNKP-201ENST00000322344 LINC00696Q6ZRV3 163 aa19.25■□□□□ 0.67
PNKP-201ENST00000322344 FAM219AQ8IW50 185 aa19.25■□□□□ 0.67
PNKP-201ENST00000322344 FAM185AQ8N0U4 392 aa19.25■□□□□ 0.67
PNKP-201ENST00000322344 PLA2G3Q9NZ20 509 aa19.25■□□□□ 0.67
PNKP-201ENST00000322344 NSG2Q9Y328 171 aa19.25■□□□□ 0.67
PNKP-201ENST00000322344 CDK2AP1O14519 115 aa19.24■□□□□ 0.67
PNKP-201ENST00000322344 ACTL6AO96019 429 aa19.24■□□□□ 0.67
PNKP-201ENST00000322344 DAZAP2Q15038 168 aaPredicted RBP19.24■□□□□ 0.67
PNKP-201ENST00000322344 MST1LQ2TV78 715 aa19.24■□□□□ 0.67
PNKP-201ENST00000322344 SP6Q3SY56 376 aa19.24■□□□□ 0.67
PNKP-201ENST00000322344 PHLDA2Q53GA4 152 aa19.24■□□□□ 0.67
PNKP-201ENST00000322344 TMEM268Q5VZI3 342 aa19.24■□□□□ 0.67
PNKP-201ENST00000322344 OR2A2Q6IF42 318 aa19.24■□□□□ 0.67
PNKP-201ENST00000322344 SVBPQ8N300 66 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms