RNA–Protein interactions for RNA: ENST00000319854.7

SHROOM1-201, Transcript of shroom family member 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SHROOM1, Length 3,190 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM1-201ENST00000319854 CST4P01036 141 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 RPS10P46783 165 aaKnown RBP13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 CDX1P47902 265 aaPredicted RBP13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 RPS23P62266 143 aaKnown RBP13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 ZNF616Q08AN1 781 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 DCAF12Q5T6F0 453 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 EIF5AL1Q6IS14 154 aaKnown RBP13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 CCDC54Q8NEL0 328 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 YPEL4Q96NS1 127 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 TMEM59Q9BXS4 323 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 POMT1Q9Y6A1 747 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 ZNF205O95201 554 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 SPINK2P20155 84 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 PDZD11Q5EBL8 140 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 PLAC9Q5JTB6 97 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 SPNS3Q6ZMD2 512 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 SSX9Q7RTT3 188 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 GALNTL5Q7Z4T8 443 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 OR56B1Q8NGI3 324 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 ERGIC1Q969X5 290 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 LYZL4Q96KX0 146 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 RBM14Q96PK6 669 aaKnown RBP13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 ANGPTL4Q9BY76 406 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 DOK5Q9P104 306 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 DNAJB11Q9UBS4 358 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 PIGLQ9Y2B2 252 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 FBXO7Q9Y3I1 522 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 CCDC163A0A0D9SF12 145 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 ZNF727A8MUV8 499 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 DHHO43323 396 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 JMJD7P0C870 316 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 FCGR2AP12318 317 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 TDGF1P13385 188 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 RPL12P30050 165 aaKnown RBP13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 FCGR2CP31995 323 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 TMEM33P57088 247 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 TAS2R31P59538 309 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 ZXDAP98168 799 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 C21orf62-AS1Q17RA5 79 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 SNAI3Q3KNW1 292 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 HEPN1Q6WQI6 88 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 OR51T1Q8NGJ9 327 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 OR10D4PQ8NGN7 298 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 PTX4Q96A99 478 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 ZNF845Q96IR2 970 aaPredicted RBP13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 TCFL5Q9UL49 500 aa13.55□□□□□ -0.24
SHROOM1-201ENST00000319854 ANGPTL7O43827 346 aa13.54□□□□□ -0.24
SHROOM1-201ENST00000319854 MLF1P58340 268 aa13.54□□□□□ -0.24
SHROOM1-201ENST00000319854 HMGN3Q15651 99 aa13.54□□□□□ -0.24
SHROOM1-201ENST00000319854 HES7Q9BYE0 225 aa13.54□□□□□ -0.24
SHROOM1-201ENST00000319854 LPAR5Q9H1C0 372 aa13.54□□□□□ -0.24
SHROOM1-201ENST00000319854 CCDC187A0A096LP49 1063 aa13.54□□□□□ -0.24
SHROOM1-201ENST00000319854 RAD51DO75771 328 aa13.54□□□□□ -0.24
SHROOM1-201ENST00000319854 IFNA17P01571 189 aa13.54□□□□□ -0.24
SHROOM1-201ENST00000319854 GDF1P27539 372 aa13.54□□□□□ -0.24
SHROOM1-201ENST00000319854 CARD18P57730 90 aa13.54□□□□□ -0.24
SHROOM1-201ENST00000319854 ENDOGQ14249 297 aaKnown RBP13.54□□□□□ -0.24
SHROOM1-201ENST00000319854 ZNF774Q6NX45 483 aa13.54□□□□□ -0.24
SHROOM1-201ENST00000319854 BRICD5Q6PL45 260 aa13.54□□□□□ -0.24
SHROOM1-201ENST00000319854 PPP1R32Q7Z5V6 425 aa13.54□□□□□ -0.24
SHROOM1-201ENST00000319854 CT55Q8WUE5 264 aa13.54□□□□□ -0.24
SHROOM1-201ENST00000319854 PRO1933Q9H354 126 aa13.54□□□□□ -0.24
SHROOM1-201ENST00000319854 NELFAQ9H3P2 528 aa13.54□□□□□ -0.24
SHROOM1-201ENST00000319854 GPR173Q9NS66 373 aa13.54□□□□□ -0.24
SHROOM1-201ENST00000319854 BPNT1O95861 308 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 RPS2P15880 293 aaKnown RBP13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 GABRR1P24046 479 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 SUCLG1P53597 346 aaKnown RBP13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 H3F3AP84243 136 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 KISS1Q15726 138 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 ZNF343Q6P1L6 599 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 ABHD3Q8WU67 409 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 DEPPQ9NTK1 212 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 FAM230AA0A1W2PPH8 454 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 M0R135 149 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 CDC14BO60729 498 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 CBR3O75828 277 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 OR2C1O95371 312 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 CCNOP22674 350 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 GAMTQ14353 236 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 UBE2V2Q15819 145 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 ZIC4Q8N9L1 334 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 GJC3Q8NFK1 279 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 ZNF799Q96GE5 643 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 GAR1Q9NY12 217 aaKnown RBP13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 PUS1Q9Y606 427 aaKnown RBP eCLIP13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 PINLYPA6NC86 204 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 TAAR5O14804 337 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 RGS19P49795 217 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 PDCD1Q15116 288 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 C1QL4Q86Z23 238 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 DTWD2Q8NBA8 298 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 OR1J1Q8NGS3 322 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 OR13G1Q8NGZ3 307 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 S100A13Q99584 98 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 OPA3Q9H6K4 179 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 ZNF701Q9NV72 531 aaPredicted RBP13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 P4HTMQ9NXG6 502 aa13.53□□□□□ -0.24
SHROOM1-201ENST00000319854 LCATP04180 440 aa13.52□□□□□ -0.24
SHROOM1-201ENST00000319854 TMEM50BP56557 158 aa13.52□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms