RNA–Protein interactions for RNA: ENST00000319533.9

RPP40-201, Transcript of ribonuclease P/MRP subunit p40, humanhuman

TSL 1 (best) BASIC

Gene RPP40, Length 1,088 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPP40-201ENST00000319533 CCL3L1P16619 93 aa11.48□□□□□ -0.57
RPP40-201ENST00000319533 DYNLT3P51808 116 aa11.48□□□□□ -0.57
RPP40-201ENST00000319533 LGALS4P56470 323 aa11.48□□□□□ -0.57
RPP40-201ENST00000319533 LOXL3P58215 753 aa11.48□□□□□ -0.57
RPP40-201ENST00000319533 ZNF273Q14593 569 aa11.48□□□□□ -0.57
RPP40-201ENST00000319533 TP53I3Q53FA7 332 aa11.48□□□□□ -0.57
RPP40-201ENST00000319533 DMRTC1Q5HYR2 192 aa11.48□□□□□ -0.57
RPP40-201ENST00000319533 CLVS2Q5SYC1 327 aa11.48□□□□□ -0.57
RPP40-201ENST00000319533 ZNF684Q5T5D7 378 aa11.48□□□□□ -0.57
RPP40-201ENST00000319533 TMEM42Q69YG0 159 aa11.48□□□□□ -0.57
RPP40-201ENST00000319533 LHFPL4Q7Z7J7 247 aa11.48□□□□□ -0.57
RPP40-201ENST00000319533 CATSPERDQ86XM0 798 aa11.48□□□□□ -0.57
RPP40-201ENST00000319533 MALSU1Q96EH3 234 aa11.48□□□□□ -0.57
RPP40-201ENST00000319533 ZNF488Q96MN9 340 aa11.48□□□□□ -0.57
RPP40-201ENST00000319533 NRIP2Q9BQI9 281 aa11.48□□□□□ -0.57
RPP40-201ENST00000319533 MMP28Q9H239 520 aa11.48□□□□□ -0.57
RPP40-201ENST00000319533 SLC22A13Q9Y226 551 aa11.48□□□□□ -0.57
RPP40-201ENST00000319533 TBL2Q9Y4P3 447 aaKnown RBP11.48□□□□□ -0.57
RPP40-201ENST00000319533 V9GYS6 101 aa11.48□□□□□ -0.57
RPP40-201ENST00000319533 SYT7O43581 403 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 SYNGR1O43759 233 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 NRASP01111 189 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 RBP4P02753 201 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 TK1P04183 234 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 UBCP0CG48 685 aaKnown RBP11.47□□□□□ -0.57
RPP40-201ENST00000319533 CCL1P22362 96 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 MYF6P23409 242 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 COX7A1P24310 79 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 MPZP25189 248 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 ERVK11-1P61568 191 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 ZNF85Q03923 595 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 HABP2Q14520 560 aaPredicted RBP11.47□□□□□ -0.57
RPP40-201ENST00000319533 CNN3Q15417 329 aaKnown RBP11.47□□□□□ -0.57
RPP40-201ENST00000319533 ODF4Q2M2E3 257 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 NSUN5P1Q3KNT7 163 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 ZNF691Q5VV52 312 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 Q6ZSR3 168 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 KCTD20Q7Z5Y7 419 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 ZNF573Q86YE8 665 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 ENTHD1Q8IYW4 607 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 LYG1Q8N1E2 194 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 ACBD7Q8N6N7 88 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 CCDC54Q8NEL0 328 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 WFDC9Q8NEX5 89 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 OR4F17Q8NGA8 305 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 OR11H6Q8NGC7 330 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 OR4M1Q8NGD0 313 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 MRAPQ8TCY5 172 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 FOXRED1Q96CU9 486 aaPredicted RBP11.47□□□□□ -0.57
RPP40-201ENST00000319533 CNBD2Q96M20 576 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 OR4F4Q96R69 305 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 NKX3-1Q99801 234 aaPredicted RBP11.47□□□□□ -0.57
RPP40-201ENST00000319533 POLDIP2Q9Y2S7 368 aa11.47□□□□□ -0.57
RPP40-201ENST00000319533 A0A1B0GTI1 187 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 PQLC2LA1A4F0 135 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 K7N7A8 449 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 FADS2O95864 444 aaKnown RBP11.46□□□□□ -0.57
RPP40-201ENST00000319533 DBTP11182 482 aaKnown RBP11.46□□□□□ -0.57
RPP40-201ENST00000319533 GABRB1P18505 474 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 HAAOP46952 286 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 CEBPDP49716 269 aaPredicted RBP11.46□□□□□ -0.57
RPP40-201ENST00000319533 RAB13P51153 203 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 ACTA2P62736 377 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 ACTG2P63267 376 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 ZNF91Q05481 1191 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 LDLRAD2Q5SZI1 272 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 ZNF626Q68DY1 528 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 LAIR2Q6ISS4 152 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 OR14K1Q8NGZ2 314 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 RHOXF1Q8NHV9 184 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 RPS4Y2Q8TD47 263 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 R3HDM4Q96D70 268 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 LGALS12Q96DT0 336 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 CITED2Q99967 270 aaPredicted RBP11.46□□□□□ -0.57
RPP40-201ENST00000319533 GPR173Q9NS66 373 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 AURKAIP1Q9NWT8 199 aaPredicted RBP11.46□□□□□ -0.57
RPP40-201ENST00000319533 AASSQ9UDR5 926 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 PITPNC1Q9UKF7 332 aa11.46□□□□□ -0.57
RPP40-201ENST00000319533 EXOGQ9Y2C4 368 aaKnown RBP11.46□□□□□ -0.57
RPP40-201ENST00000319533 DNAH9Q9NYC9 4486 aa11.46□□□□□ -0.58
RPP40-201ENST00000319533 J3QRE1 110 aa11.45□□□□□ -0.58
RPP40-201ENST00000319533 GATBO75879 557 aaKnown RBP11.45□□□□□ -0.58
RPP40-201ENST00000319533 NXPH2O95156 264 aa11.45□□□□□ -0.58
RPP40-201ENST00000319533 ISL1P61371 349 aa11.45□□□□□ -0.58
RPP40-201ENST00000319533 TTC23Q5W5X9 447 aa11.45□□□□□ -0.58
RPP40-201ENST00000319533 ZNF782Q6ZMW2 699 aaPredicted RBP11.45□□□□□ -0.58
RPP40-201ENST00000319533 OR13D1Q8NGV5 346 aa11.45□□□□□ -0.58
RPP40-201ENST00000319533 PHF21AQ96BD5 680 aa11.45□□□□□ -0.58
RPP40-201ENST00000319533 PRSS22Q9GZN4 317 aa11.45□□□□□ -0.58
RPP40-201ENST00000319533 INPP5EQ9NRR6 644 aa11.45□□□□□ -0.58
RPP40-201ENST00000319533 SLC7A11Q9UPY5 501 aa11.45□□□□□ -0.58
RPP40-201ENST00000319533 RPL36Q9Y3U8 105 aaKnown RBP11.45□□□□□ -0.58
RPP40-201ENST00000319533 NBEAL2Q6ZNJ1 2754 aa11.45□□□□□ -0.58
RPP40-201ENST00000319533 LOC107986453A0A1B0GWG9 222 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 A6NIN4 97 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 H3BSH0 61 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 J3QLW9 94 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 ZNF737O75373 536 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 SERPINA3P01011 423 aa11.44□□□□□ -0.58
RPP40-201ENST00000319533 ARG1P05089 322 aa11.44□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms