RNA–Protein interactions for RNA: ENST00000318842.11

RPGR-201, Transcript of retinitis pigmentosa GTPase regulator, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RPGR, Length 3,108 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPGR-201ENST00000318842 MPV17LQ2QL34 196 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 HIST2H2BFQ5QNW6 126 aaPredicted RBP8.38□□□□□ -1.07
RPGR-201ENST00000318842 VAX1Q5SQQ9 334 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 HIST1H2BHQ93079 126 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 SAT2Q96F10 170 aaPredicted RBP8.38□□□□□ -1.07
RPGR-201ENST00000318842 KLHDC7BQ96G42 594 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 TMEM68Q96MH6 324 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 S100A13Q99584 98 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 HIST1H2BNQ99877 126 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 HIST1H2BMQ99879 126 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 CRISPLD2Q9H0B8 497 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 ZNF160Q9HCG1 818 aa8.38□□□□□ -1.07
RPGR-201ENST00000318842 KNTC1P50748 2209 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 TMEM131Q92545 1883 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 DANCRP0C864 163 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 PGA4P0DJD7 388 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 PGA5P0DJD9 388 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 CD33P20138 364 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 ATP6V0CP27449 155 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 SLC6A8P48029 635 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 UBE2KP61086 200 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 C21orf62-AS1Q17RA5 79 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 RSPO1Q2MKA7 263 aaPredicted RBP8.37□□□□□ -1.07
RPGR-201ENST00000318842 FAHD2BQ6P2I3 314 aaPredicted RBP8.37□□□□□ -1.07
RPGR-201ENST00000318842 POC1BQ8TC44 478 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 FAHD2AQ96GK7 314 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 PRDM13Q9H4Q3 707 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 IGKV3D-11A0A0A0MRZ8 115 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 FIGNL2A6NMB9 653 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 S100A8P05109 93 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 HOXA6P31267 233 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 TMEM267Q0VDI3 215 aaPredicted RBP8.37□□□□□ -1.07
RPGR-201ENST00000318842 LCN15Q6UWW0 184 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 UEVLDQ8IX04 471 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 OR1K1Q8NGR3 316 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 FRZBQ92765 325 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 EGLN1Q9GZT9 426 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 OR51B6Q9H340 312 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 SLC2A9Q9NRM0 540 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 FAM212BQ9NTI7 297 aaPredicted RBP8.37□□□□□ -1.07
RPGR-201ENST00000318842 UFSP2Q9NUQ7 469 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 C1orf123Q9NWV4 160 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 CRIM1Q9NZV1 1036 aa8.37□□□□□ -1.07
RPGR-201ENST00000318842 IGKV1-12A0A0C4DH73 117 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 PHOX2AO14813 284 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 IGKV1D-12P01611 117 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 PGA3P0DJD8 388 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 G0S2P27469 103 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 HEPN1Q6WQI6 88 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 FBXL14Q8N1E6 418 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 OR1N1Q8NGS0 311 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 RSG1Q9BU20 258 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 SLC35B3Q9H1N7 401 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 NKX2-4Q9H2Z4 354 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 GNG13Q9P2W3 67 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 RP1L1Q8IWN7 2480 aaPredicted RBP8.36□□□□□ -1.07
RPGR-201ENST00000318842 TNFRSF10CO14798 259 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 TRAF3IP2O43734 574 aaPredicted RBP8.36□□□□□ -1.07
RPGR-201ENST00000318842 JTBO76095 146 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 IFNA21P01568 189 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 MMP7P09237 267 aaPredicted RBP8.36□□□□□ -1.07
RPGR-201ENST00000318842 ZNF728P0DKX0 622 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 CCNOP22674 350 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 NPBWR2P48146 333 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 DAP3P51398 398 aaKnown RBP8.36□□□□□ -1.07
RPGR-201ENST00000318842 LSM6P62312 80 aaKnown RBP8.36□□□□□ -1.07
RPGR-201ENST00000318842 HSD11B2P80365 405 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 GTF3C1Q12789 2109 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 HYAL1Q12794 435 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 RTP5Q14D33 572 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 OR2T2Q6IF00 324 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 SSX7Q7RTT5 188 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 VASH2Q86V25 355 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 PRR18Q8N4B5 295 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 ABHD5Q8WTS1 349 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 ASB13Q8WXK3 278 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 EMG1Q92979 244 aaKnown RBP8.36□□□□□ -1.07
RPGR-201ENST00000318842 URM1Q9BTM9 101 aaKnown RBP8.36□□□□□ -1.07
RPGR-201ENST00000318842 METTL7AQ9H8H3 244 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 PLEK2Q9NYT0 353 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 NSG1A0A0A6YYJ2 146 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 VSTM2BA6NLU5 285 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 HSD17B6O14756 317 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 SNAPC5O75971 98 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 FOLR2P14207 255 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 FUT3P21217 361 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 AADACP22760 399 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 RABIFP47224 123 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 RAB11AP62491 216 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 EWSR1Q01844 656 aaKnown RBP eCLIP8.36□□□□□ -1.07
RPGR-201ENST00000318842 ELOBQ15370 118 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 OR5C1Q8NGR4 320 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 MUCL1Q96DR8 90 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 MISP3Q96FF7 219 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 PPP4R1LQ9P1A2 415 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 ANXA10Q9UJ72 324 aa8.36□□□□□ -1.07
RPGR-201ENST00000318842 DNAJC13O75165 2243 aa8.35□□□□□ -1.07
RPGR-201ENST00000318842 NCOR1O75376 2440 aa8.35□□□□□ -1.07
RPGR-201ENST00000318842 CRYM-AS1A6NIL9 109 aa8.35□□□□□ -1.07
RPGR-201ENST00000318842 GSTP1P09211 210 aaKnown RBP8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms