RNA–Protein interactions for RNA: ENST00000318607.9

PABPC1-201, Transcript of poly(A) binding protein cytoplasmic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PABPC1, Length 3,485 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PABPC1-201ENST00000318607 SGCZQ96LD1 299 aa12.43□□□□□ -0.42
PABPC1-201ENST00000318607 DEDDO75618 318 aa12.43□□□□□ -0.42
PABPC1-201ENST00000318607 IGHG1P01857 330 aa12.43□□□□□ -0.42
PABPC1-201ENST00000318607 IAPPP10997 89 aa12.43□□□□□ -0.42
PABPC1-201ENST00000318607 ZXDAP98168 799 aa12.43□□□□□ -0.42
PABPC1-201ENST00000318607 PHF19Q5T6S3 580 aa12.43□□□□□ -0.42
PABPC1-201ENST00000318607 CLEC2AQ6UVW9 174 aa12.43□□□□□ -0.42
PABPC1-201ENST00000318607 VASH2Q86V25 355 aa12.43□□□□□ -0.42
PABPC1-201ENST00000318607 ZNF721Q8TF20 911 aa12.43□□□□□ -0.42
PABPC1-201ENST00000318607 RPUSD4Q96CM3 377 aaKnown RBP12.43□□□□□ -0.42
PABPC1-201ENST00000318607 ZNF837Q96EG3 531 aaPredicted RBP12.43□□□□□ -0.42
PABPC1-201ENST00000318607 TCTN2Q96GX1 697 aa12.43□□□□□ -0.42
PABPC1-201ENST00000318607 ZNF587BE7ETH6 402 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 GABRG2P18507 467 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 C9orf50Q5SZB4 431 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 RAET1LQ5VY80 246 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 SLC38A9Q8NBW4 561 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 PLPP5Q8NEB5 264 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 CCDC187A0A096LP49 1063 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 RBFOX3A6NFN3 312 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 ALG1L2C9J202 215 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 GSTP1P09211 210 aaKnown RBP12.42□□□□□ -0.42
PABPC1-201ENST00000318607 CCL2P13500 99 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 CD33P20138 364 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 ERVS71-1P61550 626 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 HLA-BQ31612 363 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 FNDC7Q5VTL7 733 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 ZNF385CQ66K41 422 aaPredicted RBP12.42□□□□□ -0.42
PABPC1-201ENST00000318607 LGI3Q8N145 548 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 SLC35G3Q8N808 338 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 TUBA4BQ9H853 241 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 SMCO3A2RU48 225 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 A6NIZ1 184 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 SMPD2O60906 423 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 HEXAP06865 529 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 HNF1AP20823 631 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 RAP1BP61224 184 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 IGFBP7Q16270 282 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 CMTM1Q8IZ96 169 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 ASB13Q8WXK3 278 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 ADIPOR1Q96A54 375 aa12.42□□□□□ -0.42
PABPC1-201ENST00000318607 FREM1Q5H8C1 2179 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 DCHS1Q96JQ0 3298 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 FRG2CA6NGY1 282 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 CEBPZOSA8MTT3 80 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 E5RGE8 158 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 CLPSP04118 112 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 TRGC1P0CF51 173 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 FSTP19883 344 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 FAHD2BQ6P2I3 314 aaPredicted RBP12.41□□□□□ -0.42
PABPC1-201ENST00000318607 OR1K1Q8NGR3 316 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 OR1L3Q8NH93 324 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 NTNG2Q96CW9 530 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 FAHD2AQ96GK7 314 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 UCN2Q96RP3 112 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 SLC2A9Q9NRM0 540 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 NSG2Q9Y328 171 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 TSTD3H0UI37 97 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 GDF9O60383 454 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 BEND4Q6ZU67 534 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 TGIF2LXQ8IUE1 241 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 FRZBQ92765 325 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 DDIT4LQ96D03 193 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 RSG1Q9BU20 258 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 SRPK3Q9UPE1 567 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 PTPRSQ13332 1948 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 PRR19A6NJB7 356 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 IFITM10A6NMD0 228 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 TAAR5O14804 337 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 GPR137BO60478 399 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 HIST1H2BKO60814 126 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 RBMXL2O75526 392 aaKnown RBP12.41□□□□□ -0.42
PABPC1-201ENST00000318607 HIST1H2BJP06899 126 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 MELTFP08582 738 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 DEFA4P12838 97 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 HIST1H2BOP23527 126 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 HIST1H2BBP33778 126 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 NKX2-1P43699 371 aaPredicted RBP12.41□□□□□ -0.42
PABPC1-201ENST00000318607 HIST1H2BDP58876 126 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 HIST1H2BCP62807 126 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 HIST2H2BEQ16778 126 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 HIST2H2BFQ5QNW6 126 aaPredicted RBP12.41□□□□□ -0.42
PABPC1-201ENST00000318607 DPPA2Q7Z7J5 298 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 HIST1H2BHQ93079 126 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 HIST1H2BNQ99877 126 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 HIST1H2BMQ99879 126 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 NKX2-4Q9H2Z4 354 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 FGF21Q9NSA1 209 aa12.41□□□□□ -0.42
PABPC1-201ENST00000318607 LOC400499M0QZD8 3231 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 ADAM20O43506 726 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 HLA-GP17693 338 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 APLNRP35414 380 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 APOBEC1P41238 236 aaKnown RBP12.4□□□□□ -0.42
PABPC1-201ENST00000318607 QRFPP83859 136 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 FDX2Q6P4F2 183 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 CPNE4Q96A23 557 aaPredicted RBP12.4□□□□□ -0.42
PABPC1-201ENST00000318607 MISP3Q96FF7 219 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 PACRGQ96M98 296 aaPredicted RBP12.4□□□□□ -0.42
PABPC1-201ENST00000318607 KCNK17Q96T54 332 aa12.4□□□□□ -0.42
PABPC1-201ENST00000318607 CD207Q9UJ71 328 aa12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms