RNA–Protein interactions for RNA: ENST00000318023.11

CAPN3-201, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 3,172 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-201ENST00000318023 MC3RP41968 323 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 Q0VFX4 171 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 RAB11BQ15907 218 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 NNATQ16517 81 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 C1orf185Q5T7R7 199 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 OTPQ5XKR4 325 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 ZNF100Q8IYN0 542 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 C1orf87Q8N0U7 546 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 GRHL3Q8TE85 626 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 FLRT3Q9NZU0 649 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 RFNGQ9Y644 331 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 DOCK10Q96BY6 2186 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 G3V3Y1 287 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 LCATP04180 440 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 TACR3P29371 465 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 RPL12P30050 165 aaKnown RBP8.22□□□□□ -1.09
CAPN3-201ENST00000318023 RAB7AP51149 207 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 COL10A1Q03692 680 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 IQCJQ1A5X6 159 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 PRAMEF8Q5VWM4 474 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 PRAMEF7Q5VXH5 474 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 SLC25A24Q6NUK1 477 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 ZNF429Q86V71 674 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 ZNF843Q8N446 348 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 ZNF676Q8N7Q3 588 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 CYB561D1Q8N8Q1 229 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 OR4X1Q8NH49 305 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 RNF166Q96A37 237 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-201ENST00000318023 OR2J1Q9GZK6 312 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 PELI2Q9HAT8 420 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 LOC100289279A0A1B0GTE1 492 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 M0QZ24 198 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 CD33P20138 364 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 GABRR1P24046 479 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 CHRNB4P30926 498 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 MMP16P51512 607 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 SLC25A1P53007 311 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 DUSP2Q05923 314 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 FAM53BQ14153 422 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 C1orf194Q5T5A4 169 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 ABHD17CQ6PCB6 329 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 Q6ZVH6 145 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 RTN4RL2Q86UN3 420 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 OR13C3Q8NGS6 347 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 TM4SF19Q96DZ7 209 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 OR7D2Q96RA2 312 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 NMNAT3Q96T66 252 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 CGGBP1Q9UFW8 167 aaPredicted RBP8.22□□□□□ -1.09
CAPN3-201ENST00000318023 SH3BGRL2Q9UJC5 107 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 RNF24Q9Y225 148 aa8.22□□□□□ -1.09
CAPN3-201ENST00000318023 CHTOPQ9Y3Y2 248 aaKnown RBP8.22□□□□□ -1.09
CAPN3-201ENST00000318023 TENM4Q6N022 2769 aa8.21□□□□□ -1.09
CAPN3-201ENST00000318023 HSD17B6O14756 317 aa8.21□□□□□ -1.09
CAPN3-201ENST00000318023 CBR3O75828 277 aa8.21□□□□□ -1.09
CAPN3-201ENST00000318023 HPRT1P00492 218 aa8.21□□□□□ -1.09
CAPN3-201ENST00000318023 DANCRP0C864 163 aa8.21□□□□□ -1.09
CAPN3-201ENST00000318023 TUBG1P23258 451 aa8.21□□□□□ -1.09
CAPN3-201ENST00000318023 GLIPR1P48060 266 aa8.21□□□□□ -1.09
CAPN3-201ENST00000318023 PMPCAQ10713 525 aa8.21□□□□□ -1.09
CAPN3-201ENST00000318023 ANKRD55Q3KP44 614 aa8.21□□□□□ -1.09
CAPN3-201ENST00000318023 TMEM64Q6YI46 380 aa8.21□□□□□ -1.09
CAPN3-201ENST00000318023 SLC16A14Q7RTX9 510 aa8.21□□□□□ -1.09
CAPN3-201ENST00000318023 CMTM1Q8IZ96 169 aa8.21□□□□□ -1.09
CAPN3-201ENST00000318023 CISD2Q8N5K1 135 aaKnown RBP8.21□□□□□ -1.09
CAPN3-201ENST00000318023 SLC2A12Q8TD20 617 aa8.21□□□□□ -1.09
CAPN3-201ENST00000318023 TSEN15Q8WW01 171 aaKnown RBP8.21□□□□□ -1.09
CAPN3-201ENST00000318023 VPS25Q9BRG1 176 aa8.21□□□□□ -1.09
CAPN3-201ENST00000318023 MKKSQ9NPJ1 570 aaPredicted RBP8.21□□□□□ -1.09
CAPN3-201ENST00000318023 PRTFDC1Q9NRG1 225 aa8.21□□□□□ -1.09
CAPN3-201ENST00000318023 IKZF2Q9UKS7 526 aa8.21□□□□□ -1.09
CAPN3-201ENST00000318023 GTF2A1LQ9UNN4 478 aa8.21□□□□□ -1.09
CAPN3-201ENST00000318023 ZFP30Q9Y2G7 519 aa8.21□□□□□ -1.09
CAPN3-201ENST00000318023 KLHDC2Q9Y2U9 406 aa8.21□□□□□ -1.09
CAPN3-201ENST00000318023 ZGRF1Q86YA3 2104 aa8.21□□□□□ -1.1
CAPN3-201ENST00000318023 KIR2DL5BA0A0G2JN68 375 aa8.21□□□□□ -1.1
CAPN3-201ENST00000318023 KIR2DL5BA0A0G2JPC4 375 aa8.21□□□□□ -1.1
CAPN3-201ENST00000318023 ZNF705FA8MVS1 300 aaPredicted RBP8.21□□□□□ -1.1
CAPN3-201ENST00000318023 JTBO76095 146 aa8.21□□□□□ -1.1
CAPN3-201ENST00000318023 AHSA1O95433 338 aa8.21□□□□□ -1.1
CAPN3-201ENST00000318023 SCGB1D2O95969 90 aa8.21□□□□□ -1.1
CAPN3-201ENST00000318023 ZNF705DP0CH99 300 aaPredicted RBP8.21□□□□□ -1.1
CAPN3-201ENST00000318023 ZNF705BP0CI00 300 aaPredicted RBP8.21□□□□□ -1.1
CAPN3-201ENST00000318023 MMP9P14780 707 aa8.21□□□□□ -1.1
CAPN3-201ENST00000318023 CLEC12BQ2HXU8 276 aa8.21□□□□□ -1.1
CAPN3-201ENST00000318023 WDR25Q64LD2 544 aaPredicted RBP8.21□□□□□ -1.1
CAPN3-201ENST00000318023 TMEM182Q6ZP80 229 aaPredicted RBP8.21□□□□□ -1.1
CAPN3-201ENST00000318023 TRAPPC6BQ86SZ2 158 aa8.21□□□□□ -1.1
CAPN3-201ENST00000318023 KIR2DL5AQ8N109 375 aa8.21□□□□□ -1.1
CAPN3-201ENST00000318023 CA13Q8N1Q1 262 aa8.21□□□□□ -1.1
CAPN3-201ENST00000318023 ANKRD9Q96BM1 317 aaPredicted RBP8.21□□□□□ -1.1
CAPN3-201ENST00000318023 FER1L6-AS2Q96M78 137 aa8.21□□□□□ -1.1
CAPN3-201ENST00000318023 TSSK2Q96PF2 358 aa8.21□□□□□ -1.1
CAPN3-201ENST00000318023 HIST1H2AAQ96QV6 131 aa8.21□□□□□ -1.1
CAPN3-201ENST00000318023 GINS3Q9BRX5 216 aa8.21□□□□□ -1.1
CAPN3-201ENST00000318023 MS4A8Q9BY19 250 aa8.21□□□□□ -1.1
CAPN3-201ENST00000318023 OR52A1Q9UKL2 312 aa8.21□□□□□ -1.1
CAPN3-201ENST00000318023 LIPGQ9Y5X9 500 aa8.21□□□□□ -1.1
CAPN3-201ENST00000318023 YLPM1P49750 1951 aaKnown RBP8.21□□□□□ -1.1
CAPN3-201ENST00000318023 NAV2Q8IVL1 2488 aa8.21□□□□□ -1.1
CAPN3-201ENST00000318023 HIVEP3Q5T1R4 2406 aa8.2□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 50.2 ms