RNA–Protein interactions for RNA: ENST00000318007.9

PDLIM5-202, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best) BASIC

Gene PDLIM5, Length 1,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-202ENST00000318007 IGFBPL1Q8WX77 278 aa12.92□□□□□ -0.34
PDLIM5-202ENST00000318007 RDH5Q92781 318 aa12.92□□□□□ -0.34
PDLIM5-202ENST00000318007 HPS1Q92902 700 aa12.92□□□□□ -0.34
PDLIM5-202ENST00000318007 NLKQ9UBE8 527 aa12.92□□□□□ -0.34
PDLIM5-202ENST00000318007 GHRLQ9UBU3 117 aa12.92□□□□□ -0.34
PDLIM5-202ENST00000318007 RAB22AQ9UL26 194 aa12.92□□□□□ -0.34
PDLIM5-202ENST00000318007 ETV7Q9Y603 341 aa12.92□□□□□ -0.34
PDLIM5-202ENST00000318007 NPTNQ9Y639 398 aa12.92□□□□□ -0.34
PDLIM5-202ENST00000318007 OR2AT4A6NND4 320 aa12.91□□□□□ -0.34
PDLIM5-202ENST00000318007 LHBP01229 141 aa12.91□□□□□ -0.34
PDLIM5-202ENST00000318007 GNB3P16520 340 aa12.91□□□□□ -0.34
PDLIM5-202ENST00000318007 BLVRBP30043 206 aaPredicted RBP12.91□□□□□ -0.34
PDLIM5-202ENST00000318007 GPR176Q14439 515 aa12.91□□□□□ -0.34
PDLIM5-202ENST00000318007 MICBQ29980 383 aa12.91□□□□□ -0.34
PDLIM5-202ENST00000318007 SMIM21Q3B7S5 101 aa12.91□□□□□ -0.34
PDLIM5-202ENST00000318007 OLFML2AQ68BL7 652 aa12.91□□□□□ -0.34
PDLIM5-202ENST00000318007 SNX29P2Q8IUI4 249 aa12.91□□□□□ -0.34
PDLIM5-202ENST00000318007 OR6Q1Q8NGQ2 317 aa12.91□□□□□ -0.34
PDLIM5-202ENST00000318007 Q8TCH9 128 aa12.91□□□□□ -0.34
PDLIM5-202ENST00000318007 Q96M66 194 aa12.91□□□□□ -0.34
PDLIM5-202ENST00000318007 URM1Q9BTM9 101 aaKnown RBP12.91□□□□□ -0.34
PDLIM5-202ENST00000318007 CELSR1Q9NYQ6 3014 aa12.91□□□□□ -0.34
PDLIM5-202ENST00000318007 PPIAL4EA0A075B759 164 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 PPIAL4DF5H284 164 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 RP2O75695 350 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 PPIAL4FP0DN26 164 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 PSG2P11465 335 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 IL18Q14116 193 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 ZMYND11Q15326 602 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 TMEM69Q5SWH9 247 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 OR2W3Q7Z3T1 314 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 LRRC28Q86X40 367 aaPredicted RBP12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 ASCC1Q8N9N2 400 aaKnown RBP12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 ZNRF1Q8ND25 227 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 ERGIC1Q969X5 290 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 S100A16Q96FQ6 103 aaKnown RBP12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 CCL13Q99616 98 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 IL36GQ9NZH8 169 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 PPIAL4AQ9Y536 164 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 PEX16Q9Y5Y5 336 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 ZNF469Q96JG9 3925 aaPredicted RBP12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 TANC2Q9HCD6 1990 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 IGKV1D-17A0A075B6S4 117 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 TRAV18A0A075B6X5 111 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 UBE2QL1A1L167 161 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 METTL21EPA6NDL7 271 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 MEIS3P1A6NDR6 274 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 OOEPA6NGQ2 149 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 CLDN25C9JDP6 229 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 TMPRSS2O15393 492 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 OR2H2O95918 312 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 HAND1O96004 215 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 CPT2P23786 658 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 PTH2RP49190 550 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 CAPZA1P52907 286 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 SIGIRRQ6IA17 410 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 FAM131AQ6UXB0 335 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 Q8IYB0 196 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 C1orf87Q8N0U7 546 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 FGFRL1Q8N441 504 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 CD177Q8N6Q3 437 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 NEK7Q8TDX7 302 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 ARHGAP5-AS1Q96IT6 56 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 HES4Q9HCC6 221 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 FBXO9Q9UK97 447 aaPredicted RBP12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 WIPI2Q9Y4P8 454 aa12.9□□□□□ -0.34
PDLIM5-202ENST00000318007 BAHCC1Q9P281 2608 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 PDZD2O15018 2839 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 A0A0G2JMP0 313 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 A0A0X1KG70 313 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 NOS1APO75052 506 aaPredicted RBP12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 APOA1P02647 267 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 TALDO1P37837 337 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 BTG1P62324 171 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 PLAC9Q5JTB6 97 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 ELP2Q6IA86 826 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 FIP1L1Q6UN15 594 aaKnown RBP12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 DCDC5Q6ZRR9 648 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 FAM216BQ8N7L0 139 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 OR4M2Q8NGB6 313 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 OR10Z1Q8NGY1 313 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 MRI1Q9BV20 369 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 PPA2Q9H2U2 334 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 FLNBO75369 2602 aaKnown RBP12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 TMEM235A6NFC5 223 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 RAB27BO00194 218 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 DEGS1O15121 323 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 RAB6AP20340 208 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 COL10A1Q03692 680 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 ATXN7L3Q14CW9 347 aaPredicted RBP12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 LYPD2Q6UXB3 125 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 TPRX1Q8N7U7 411 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 OR10R2Q8NGX6 335 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 FAAP24Q9BTP7 215 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 BPESC1Q9GZL8 116 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 PCDHB16Q9NRJ7 776 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 PLEKHJ1Q9NW61 149 aa12.89□□□□□ -0.35
PDLIM5-202ENST00000318007 FABP12A6NFH5 140 aa12.88□□□□□ -0.35
PDLIM5-202ENST00000318007 PSPNO60542 156 aa12.88□□□□□ -0.35
PDLIM5-202ENST00000318007 PRDX2P32119 198 aa12.88□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms