RNA–Protein interactions for RNA: ENST00000316763.7

VRK3-201, Transcript of vaccinia related kinase 3, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VRK3, Length 1,938 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK3-201ENST00000316763 XRCC2O43543 280 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 HGFACQ04756 655 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 ANKRD55Q3KP44 614 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 NRN1LQ496H8 165 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 TMEM42Q69YG0 159 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 ASCL4Q6XD76 172 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 BSNQ9UPA5 3926 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 TLN1Q9Y490 2541 aaKnown RBP12.25□□□□□ -0.45
VRK3-201ENST00000316763 ZNF724A8MTY0 619 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 SPRY1O43609 319 aaPredicted RBP12.25□□□□□ -0.45
VRK3-201ENST00000316763 IFNA2P01563 188 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 PATE4P0C8F1 98 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 TPT1P13693 172 aaKnown RBP12.25□□□□□ -0.45
VRK3-201ENST00000316763 DTYMKP23919 212 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 RBMXP38159 391 aaKnown RBP12.25□□□□□ -0.45
VRK3-201ENST00000316763 FUT6P51993 359 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 NAAAQ02083 359 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 RNPS1Q15287 305 aaKnown RBP12.25□□□□□ -0.45
VRK3-201ENST00000316763 TUSC1Q2TAM9 212 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 FAM74A1Q5RGS3 127 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 PRSS54Q6PEW0 395 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 STOML3Q8TAV4 291 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 MRPS24Q96EL2 167 aaKnown RBP12.25□□□□□ -0.45
VRK3-201ENST00000316763 CMSS1Q9BQ75 279 aaKnown RBP12.25□□□□□ -0.45
VRK3-201ENST00000316763 ZNF2Q9BSG1 426 aaPredicted RBP12.25□□□□□ -0.45
VRK3-201ENST00000316763 RNF126Q9BV68 326 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 C1orf123Q9NWV4 160 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 ANXA10Q9UJ72 324 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 NOSIPQ9Y314 301 aaKnown RBP12.25□□□□□ -0.45
VRK3-201ENST00000316763 ZNF175Q9Y473 711 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 ATRXP46100 2492 aa12.25□□□□□ -0.45
VRK3-201ENST00000316763 EPG5Q9HCE0 2579 aa12.24□□□□□ -0.45
VRK3-201ENST00000316763 hCG_38984A0A1B0GV85 526 aa12.24□□□□□ -0.45
VRK3-201ENST00000316763 F8VVB4 439 aa12.24□□□□□ -0.45
VRK3-201ENST00000316763 F8VWA3 439 aa12.24□□□□□ -0.45
VRK3-201ENST00000316763 LGALS8O00214 317 aa12.24□□□□□ -0.45
VRK3-201ENST00000316763 ANGPTL7O43827 346 aa12.24□□□□□ -0.45
VRK3-201ENST00000316763 MRPL33O75394 65 aaKnown RBP12.24□□□□□ -0.45
VRK3-201ENST00000316763 ADAP1O75689 374 aa12.24□□□□□ -0.45
VRK3-201ENST00000316763 CTSDP07339 412 aaPredicted RBP12.24□□□□□ -0.45
VRK3-201ENST00000316763 LYL1P12980 280 aa12.24□□□□□ -0.45
VRK3-201ENST00000316763 SGPP2Q8IWX5 399 aa12.24□□□□□ -0.45
VRK3-201ENST00000316763 SKA3Q8IX90 412 aa12.24□□□□□ -0.45
VRK3-201ENST00000316763 SREK1IP1Q8N9Q2 155 aaPredicted RBP12.24□□□□□ -0.45
VRK3-201ENST00000316763 PIK3IP1Q96FE7 263 aa12.24□□□□□ -0.45
VRK3-201ENST00000316763 NECAP2Q9NVZ3 263 aa12.24□□□□□ -0.45
VRK3-201ENST00000316763 PARPBPQ9NWS1 579 aa12.24□□□□□ -0.45
VRK3-201ENST00000316763 TAS2R3Q9NYW6 316 aa12.24□□□□□ -0.45
VRK3-201ENST00000316763 IL36GQ9NZH8 169 aa12.24□□□□□ -0.45
VRK3-201ENST00000316763 ATPIF1Q9UII2 106 aa12.24□□□□□ -0.45
VRK3-201ENST00000316763 IGKV1-27A0A075B6S5 117 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 ZNF816-ZNF321PA0A0X1KG74 233 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 PLATP00750 562 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 KNG1P01042 644 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 FAM3AP98173 230 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 KLRB1Q12918 225 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 TAF9Q16594 264 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 UNQ6126/PRO20091Q6UXV3 157 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 OSR2Q8N2R0 312 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 CYYR1Q96J86 154 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 FAAP24Q9BTP7 215 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 LINC00470Q9BZP3 86 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 SHARPINQ9H0F6 387 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 DNAJB11Q9UBS4 358 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 AK3Q9UIJ7 227 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 GPR160Q9UJ42 338 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 TEX46H3BTG2 121 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 HOXD4P09016 255 aaPredicted RBP12.23□□□□□ -0.45
VRK3-201ENST00000316763 OR5H8P0DN80 308 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 RPS2P15880 293 aaKnown RBP12.23□□□□□ -0.45
VRK3-201ENST00000316763 CHATP28329 748 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 ZNF92Q03936 586 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 OR8B8Q15620 311 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 STK11Q15831 433 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 PLCXD3Q63HM9 321 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 TUSC5Q8IXB3 177 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 CISD2Q8N5K1 135 aaKnown RBP12.23□□□□□ -0.45
VRK3-201ENST00000316763 POC1AQ8NBT0 407 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 PRRG4Q9BZD6 226 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 GP6Q9HCN6 339 aa12.23□□□□□ -0.45
VRK3-201ENST00000316763 ZNF850A8MQ14 1090 aa12.22□□□□□ -0.45
VRK3-201ENST00000316763 IFNA21P01568 189 aa12.22□□□□□ -0.45
VRK3-201ENST00000316763 MMP7P09237 267 aaPredicted RBP12.22□□□□□ -0.45
VRK3-201ENST00000316763 PDZK1IP1Q13113 114 aa12.22□□□□□ -0.45
VRK3-201ENST00000316763 PABPC1L2AQ5JQF8 200 aa12.22□□□□□ -0.45
VRK3-201ENST00000316763 ELP2Q6IA86 826 aa12.22□□□□□ -0.45
VRK3-201ENST00000316763 BAP18Q8IXM2 172 aa12.22□□□□□ -0.45
VRK3-201ENST00000316763 FGFBP3Q8TAT2 258 aa12.22□□□□□ -0.45
VRK3-201ENST00000316763 PIGCQ92535 297 aa12.22□□□□□ -0.45
VRK3-201ENST00000316763 SARAFQ96BY9 339 aa12.22□□□□□ -0.45
VRK3-201ENST00000316763 POM121Q96HA1 1249 aa12.22□□□□□ -0.45
VRK3-201ENST00000316763 HDHD3Q9BSH5 251 aaPredicted RBP12.22□□□□□ -0.45
VRK3-201ENST00000316763 C1QTNF5Q9BXJ0 243 aa12.22□□□□□ -0.45
VRK3-201ENST00000316763 PIGMQ9H3S5 423 aa12.22□□□□□ -0.45
VRK3-201ENST00000316763 CLCF1Q9UBD9 225 aa12.22□□□□□ -0.45
VRK3-201ENST00000316763 IGKV1D-8A0A087WSZ0 117 aa12.21□□□□□ -0.45
VRK3-201ENST00000316763 SLC22A20A6NK97 555 aa12.21□□□□□ -0.45
VRK3-201ENST00000316763 H0YIZ8 118 aa12.21□□□□□ -0.45
VRK3-201ENST00000316763 HOXB5P09067 269 aa12.21□□□□□ -0.45
VRK3-201ENST00000316763 PTGER4P35408 488 aa12.21□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms