RNA–Protein interactions for RNA: ENST00000315571.5

LDLRAD3-201, Transcript of low density lipoprotein receptor class A domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LDLRAD3, Length 3,798 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDLRAD3-201ENST00000315571 RPS11P62280 158 aaKnown RBP eCLIP10.31□□□□□ -0.76
LDLRAD3-201ENST00000315571 C17orf82Q86X59 251 aaPredicted RBP10.31□□□□□ -0.76
LDLRAD3-201ENST00000315571 GPER1Q99527 375 aa10.31□□□□□ -0.76
LDLRAD3-201ENST00000315571 ATP5SQ99766 215 aa10.31□□□□□ -0.76
LDLRAD3-201ENST00000315571 PCGF1Q9BSM1 259 aa10.31□□□□□ -0.76
LDLRAD3-201ENST00000315571 RYDENQ9NUL5 291 aaKnown RBP10.31□□□□□ -0.76
LDLRAD3-201ENST00000315571 ARHGEF17Q96PE2 2063 aaPredicted RBP10.31□□□□□ -0.76
LDLRAD3-201ENST00000315571 A0A1W2PPV9 198 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 GNG7O60262 68 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 VAMP5O95183 116 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 DANCRP0C864 163 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 GALR1P47211 349 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 CSNK2A1P68400 391 aaPredicted RBP10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 NHLH1Q02575 133 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 OR1Q1Q15612 314 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 ACOT6Q3I5F7 207 aaPredicted RBP10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 CSNK2A3Q8NEV1 391 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 GLIPR2Q9H4G4 154 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 TRDCB7Z8K6 153 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 OPN1LWP04000 364 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 GNB3P16520 340 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 CSNK2A2P19784 350 aaPredicted RBP10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 GRK6P43250 576 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 SSBP1Q04837 148 aaKnown RBP10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 PRDX1Q06830 199 aaKnown RBP10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 SLC17A1Q14916 467 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 TESK1Q15569 626 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 TPTE2P1Q5T6R2 138 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 MED25Q71SY5 747 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 PAQR4Q8N4S7 273 aaPredicted RBP10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 OR2A1Q8NGT9 310 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 CMTM2Q8TAZ6 248 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 SLC2A12Q8TD20 617 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 CHST11Q9NPF2 352 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 OR6C3Q9NZP0 311 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 EIPR1Q53HC9 387 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 DPY19L4Q7Z388 723 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 ZNF550Q7Z398 422 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 MRGPREQ86SM8 312 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 OR56A1Q8NGH5 318 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 ERGIC1Q969X5 290 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 SMIM7Q9BQ49 75 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 HSPB9Q9BQS6 159 aa10.3□□□□□ -0.76
LDLRAD3-201ENST00000315571 TOX4O94842 621 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 IL6RP08887 468 aaPredicted RBP10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 ZNF883P0CG24 379 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 GLRA1P23415 457 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 GABRA2P47869 451 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 DUSP3P51452 185 aaPredicted RBP10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 PRRX1P54821 245 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 HIKESHIQ53FT3 197 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 FBXW12Q6X9E4 464 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 NAT6Q93015 286 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 STARD4Q96DR4 205 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 ALG12Q9BV10 488 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 SLC26A1Q9H2B4 701 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 C1orf123Q9NWV4 160 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 KLK13Q9UKR3 277 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 DUX1O43812 170 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 SEC11BP0C7V7 166 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 PEBP1P30086 187 aaKnown RBP10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 CAPZBP47756 277 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 COMPP49747 757 aaPredicted RBP10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 CNN1P51911 297 aaKnown RBP10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 OR1D5P58170 312 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 TPPP2P59282 170 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 CCL20P78556 96 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 RNASEH2CQ8TDP1 164 aaKnown RBP10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 RHBDD1Q8TEB9 315 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 TIMP4Q99727 224 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 CCDC3Q9BQI4 270 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 PELI2Q9HAT8 420 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 TRAPPC1Q9Y5R8 145 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 A0A1W2PN81 502 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 PRAMEF27A3QJZ7 478 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 NDUFB2O95178 105 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 CHRNA7P36544 502 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 SCGB2A2Q13296 93 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 CHRFAM7AQ494W8 412 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 GUSBP11Q6P575 273 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 FGF11Q92914 225 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 KISS1RQ969F8 398 aaPredicted RBP10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 TM4SF18Q96CE8 201 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 RASD2Q96D21 266 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 MACROD1Q9BQ69 325 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 LAMTOR2Q9Y2Q5 125 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 SCN2AQ99250 2005 aa10.29□□□□□ -0.76
LDLRAD3-201ENST00000315571 H7C1C5 153 aa10.28□□□□□ -0.76
LDLRAD3-201ENST00000315571 SFT2D2O95562 160 aa10.28□□□□□ -0.76
LDLRAD3-201ENST00000315571 HLA-GP17693 338 aa10.28□□□□□ -0.76
LDLRAD3-201ENST00000315571 NBL1P41271 181 aa10.28□□□□□ -0.76
LDLRAD3-201ENST00000315571 PDX1P52945 283 aa10.28□□□□□ -0.76
LDLRAD3-201ENST00000315571 LCN6P62502 163 aa10.28□□□□□ -0.76
LDLRAD3-201ENST00000315571 OCIAD2Q56VL3 154 aa10.28□□□□□ -0.76
LDLRAD3-201ENST00000315571 ADGRE4PQ86SQ3 457 aa10.28□□□□□ -0.76
LDLRAD3-201ENST00000315571 SRPK3Q9UPE1 567 aa10.28□□□□□ -0.76
LDLRAD3-201ENST00000315571 SLC17A2O00624 439 aa10.28□□□□□ -0.76
LDLRAD3-201ENST00000315571 CBR3O75828 277 aa10.28□□□□□ -0.76
LDLRAD3-201ENST00000315571 MPIG6BO95866 241 aa10.28□□□□□ -0.76
LDLRAD3-201ENST00000315571 SLC6A9P48067 706 aa10.28□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 35.9 ms