RNA–Protein interactions for RNA: ENST00000315285.7

SPAST-201, Transcript of spastin, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SPAST, Length 5,117 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-201ENST00000315285 CACNG5Q9UF02 275 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 MED19A0JLT2 244 aaPredicted RBP12.16□□□□□ -0.46
SPAST-201ENST00000315285 M0R1X1 148 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 ALKBH6Q3KRA9 238 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 TSPO2Q5TGU0 170 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 ADAT3Q96EY9 351 aaPredicted RBP12.16□□□□□ -0.46
SPAST-201ENST00000315285 GAR1Q9NY12 217 aaKnown RBP12.16□□□□□ -0.46
SPAST-201ENST00000315285 TRAV17A0A0B4J275 112 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 G3V3Q6 166 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 ADH4P08319 380 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 GAB4Q2WGN9 574 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 ESRP2Q9H6T0 727 aaKnown RBP12.16□□□□□ -0.46
SPAST-201ENST00000315285 FSCN3Q9NQT6 498 aa12.16□□□□□ -0.46
SPAST-201ENST00000315285 TRGV10A0A0A0MS01 117 aa12.15□□□□□ -0.46
SPAST-201ENST00000315285 OR5B21A6NL26 309 aa12.15□□□□□ -0.46
SPAST-201ENST00000315285 SMRP1Q8NCR6 262 aa12.15□□□□□ -0.46
SPAST-201ENST00000315285 PGLYRP3Q96LB9 341 aa12.15□□□□□ -0.46
SPAST-201ENST00000315285 TXN2Q99757 166 aa12.15□□□□□ -0.46
SPAST-201ENST00000315285 MMP24Q9Y5R2 645 aa12.15□□□□□ -0.46
SPAST-201ENST00000315285 TNS1Q9HBL0 1735 aaKnown RBP12.15□□□□□ -0.46
SPAST-201ENST00000315285 RRP8O43159 456 aaKnown RBP12.15□□□□□ -0.46
SPAST-201ENST00000315285 MT-CO3P00414 261 aa12.15□□□□□ -0.46
SPAST-201ENST00000315285 SPTBP11277 2137 aa12.15□□□□□ -0.46
SPAST-201ENST00000315285 LPAR6P43657 344 aa12.15□□□□□ -0.46
SPAST-201ENST00000315285 GNB1P62873 340 aa12.15□□□□□ -0.46
SPAST-201ENST00000315285 SCN10AQ9Y5Y9 1956 aa12.15□□□□□ -0.46
SPAST-201ENST00000315285 HLA-DQB1P01920 261 aa12.15□□□□□ -0.46
SPAST-201ENST00000315285 MDH2P40926 338 aaKnown RBP12.15□□□□□ -0.46
SPAST-201ENST00000315285 RPS4XP62701 263 aaKnown RBP12.15□□□□□ -0.46
SPAST-201ENST00000315285 SLC38A11Q08AI6 406 aa12.15□□□□□ -0.46
SPAST-201ENST00000315285 OR2Z1Q8NG97 314 aa12.15□□□□□ -0.46
SPAST-201ENST00000315285 RFESDQ8TAC1 157 aa12.15□□□□□ -0.46
SPAST-201ENST00000315285 TIMD4Q96H15 378 aa12.15□□□□□ -0.46
SPAST-201ENST00000315285 GPR137Q96N19 417 aa12.15□□□□□ -0.46
SPAST-201ENST00000315285 CTNNBIP1Q9NSA3 81 aaPredicted RBP12.15□□□□□ -0.46
SPAST-201ENST00000315285 ZNF320A2RRD8 509 aa12.15□□□□□ -0.47
SPAST-201ENST00000315285 TMEM218A2RU14 115 aa12.15□□□□□ -0.47
SPAST-201ENST00000315285 ANKRD34CP0C6C1 535 aa12.15□□□□□ -0.47
SPAST-201ENST00000315285 NOVA1P51513 510 aaKnown RBP12.15□□□□□ -0.47
SPAST-201ENST00000315285 MLF1P58340 268 aa12.15□□□□□ -0.47
SPAST-201ENST00000315285 POLR2GP62487 172 aaKnown RBP eCLIP12.15□□□□□ -0.47
SPAST-201ENST00000315285 GEMIN2O14893 280 aaKnown RBP12.14□□□□□ -0.47
SPAST-201ENST00000315285 RD3LP0DJH9 198 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 CCL4P13236 92 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 OR2M3Q8NG83 312 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 OR4D10Q8NGI6 311 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 ELF5Q9UKW6 265 aaPredicted RBP12.14□□□□□ -0.47
SPAST-201ENST00000315285 SF3B6Q9Y3B4 125 aaKnown RBP12.14□□□□□ -0.47
SPAST-201ENST00000315285 TPRP12270 2363 aaKnown RBP12.14□□□□□ -0.47
SPAST-201ENST00000315285 SPRY3O43610 288 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 DXOO77932 396 aaKnown RBP12.14□□□□□ -0.47
SPAST-201ENST00000315285 CYC1P08574 325 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 CST2P09228 141 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 CCL3P10147 92 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 TLE1Q04724 770 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 FABP9Q0Z7S8 132 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 SLC22A18ASQ8N1D0 253 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 TMEM18Q96B42 140 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 GPX7Q96SL4 187 aaPredicted RBP12.14□□□□□ -0.47
SPAST-201ENST00000315285 ALX4Q9H161 411 aaPredicted RBP12.14□□□□□ -0.47
SPAST-201ENST00000315285 STARD10Q9Y365 291 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 HEXAP06865 529 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 PNLIPP16233 465 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 UCN2Q96RP3 112 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 MPC1Q9Y5U8 109 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 MRPS18BQ9Y676 258 aaKnown RBP12.14□□□□□ -0.47
SPAST-201ENST00000315285 A0A1W2PPC1 479 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 HPP00738 406 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 BPIFB3P59826 476 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 FAM24BQ8N5W8 94 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 ADAD2Q8NCV1 583 aaKnown RBP12.14□□□□□ -0.47
SPAST-201ENST00000315285 OR6S1Q8NH40 331 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 OR5B3Q8NH48 314 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 PTX4Q96A99 478 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 KCNE5Q9UJ90 142 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 POMT1Q9Y6A1 747 aa12.14□□□□□ -0.47
SPAST-201ENST00000315285 MAP1LC3B2A6NCE7 125 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 H0Y8G0 127 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 TTRP02766 147 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 SPINK14Q6IE38 97 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 MAP1LC3BQ9GZQ8 125 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 CYTIPO60759 359 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 LIAT1Q6ZQX7 453 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 OR13G1Q8NGZ3 307 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 TCFL5Q9UL49 500 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 A0A1B0GTQ1 180 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 MEX3AA1L020 520 aaKnown RBP12.13□□□□□ -0.47
SPAST-201ENST00000315285 NGFRP08138 427 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 ZNF17P17021 662 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 MGAT2Q10469 447 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 LYPD8Q6UX82 237 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 STPG2Q8N412 459 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 CHST5Q9GZS9 411 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 TOLLIPQ9H0E2 274 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 GPR27Q9NS67 375 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 PSG11Q9UQ72 335 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 IGHV5-10-1A0A0J9YXX1 117 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 DVL1O14640 695 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 NTF3P20783 257 aa12.13□□□□□ -0.47
SPAST-201ENST00000315285 RAB13P51153 203 aa12.13□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms