RNA–Protein interactions for RNA: ENST00000313863.10

MKS1-201, Transcript of Meckel syndrome, type 1, humanhuman

TSL 5 BASIC

Gene MKS1, Length 2,091 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MKS1-201ENST00000313863 PHF1O43189 567 aaPredicted RBP12.03□□□□□ -0.48
MKS1-201ENST00000313863 DKK1O94907 266 aa12.03□□□□□ -0.48
MKS1-201ENST00000313863 IGHV2-70P01814 119 aa12.03□□□□□ -0.48
MKS1-201ENST00000313863 HAAOP46952 286 aa12.03□□□□□ -0.48
MKS1-201ENST00000313863 RAB2AP61019 212 aa12.03□□□□□ -0.48
MKS1-201ENST00000313863 EWSR1Q01844 656 aaKnown RBP eCLIP12.03□□□□□ -0.48
MKS1-201ENST00000313863 PHYHD1Q5SRE7 291 aa12.03□□□□□ -0.48
MKS1-201ENST00000313863 CLEC9AQ6UXN8 241 aa12.03□□□□□ -0.48
MKS1-201ENST00000313863 OR2C3Q8N628 320 aa12.03□□□□□ -0.48
MKS1-201ENST00000313863 BOD1Q96IK1 185 aa12.03□□□□□ -0.48
MKS1-201ENST00000313863 SLC7A11Q9UPY5 501 aa12.03□□□□□ -0.48
MKS1-201ENST00000313863 TRAV20A0A0B4J274 112 aa12.02□□□□□ -0.48
MKS1-201ENST00000313863 SPRY1O43609 319 aaPredicted RBP12.02□□□□□ -0.48
MKS1-201ENST00000313863 ANGPTL7O43827 346 aa12.02□□□□□ -0.48
MKS1-201ENST00000313863 PDCD6O75340 191 aa12.02□□□□□ -0.48
MKS1-201ENST00000313863 CST2P09228 141 aa12.02□□□□□ -0.48
MKS1-201ENST00000313863 OR8U8P0C7N1 319 aa12.02□□□□□ -0.48
MKS1-201ENST00000313863 OR13C7P0DN81 318 aa12.02□□□□□ -0.48
MKS1-201ENST00000313863 NQO2P16083 231 aa12.02□□□□□ -0.48
MKS1-201ENST00000313863 PNLIPP16233 465 aa12.02□□□□□ -0.48
MKS1-201ENST00000313863 CRYGSP22914 178 aa12.02□□□□□ -0.48
MKS1-201ENST00000313863 HIKESHIQ53FT3 197 aa12.02□□□□□ -0.48
MKS1-201ENST00000313863 C20orf196Q8IYI0 205 aa12.02□□□□□ -0.48
MKS1-201ENST00000313863 ZNF100Q8IYN0 542 aa12.02□□□□□ -0.48
MKS1-201ENST00000313863 OR52M1Q8NGK5 317 aa12.02□□□□□ -0.48
MKS1-201ENST00000313863 GNPNAT1Q96EK6 184 aaPredicted RBP12.02□□□□□ -0.48
MKS1-201ENST00000313863 SH3BGRL3Q9H299 93 aa12.02□□□□□ -0.48
MKS1-201ENST00000313863 PLSCR2Q9NRY7 297 aa12.02□□□□□ -0.48
MKS1-201ENST00000313863 MIOXQ9UGB7 285 aa12.02□□□□□ -0.48
MKS1-201ENST00000313863 FOXD3Q9UJU5 478 aaPredicted RBP12.02□□□□□ -0.48
MKS1-201ENST00000313863 CHCHD2Q9Y6H1 151 aaPredicted RBP12.02□□□□□ -0.48
MKS1-201ENST00000313863 EML6Q6ZMW3 1958 aa12.02□□□□□ -0.48
MKS1-201ENST00000313863 A0A087WWC5 75 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 A0A1W2PPE3 182 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 DUXBA0A1W2PPF3 345 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 RBFOX3A6NFN3 312 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 GJE1A6NN92 205 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 WRBO00258 174 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 MSTNO14793 375 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 DNPH1O43598 174 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 NRASP01111 189 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 DBHP09172 617 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 SRFP11831 508 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 MMP9P14780 707 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 DAOP14920 347 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 TCN2P20062 427 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 KLK2P20151 261 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 FHITP49789 147 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 FUT6P51993 359 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 DSCR4P56555 118 aaPredicted RBP12.02□□□□□ -0.49
MKS1-201ENST00000313863 NHLH2Q02577 135 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 COL19A1Q14993 1142 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 SNAI3Q3KNW1 292 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 GPR137CQ8N3F9 429 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 SLC25A45Q8N413 288 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 OR10AD1Q8NGE0 317 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 OR2G3Q8NGZ4 309 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 PLEKHF2Q9H8W4 249 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 KIAA1456Q9P272 454 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 ZDHHC8Q9ULC8 765 aa12.02□□□□□ -0.49
MKS1-201ENST00000313863 ASCC3Q8N3C0 2202 aaKnown RBP12.01□□□□□ -0.49
MKS1-201ENST00000313863 CCDC187A0A096LP49 1063 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 PIGBOS1A0A0B4J2F0 54 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 C3orf85A0A1B0GTC6 90 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 A0A1W2PPE2 198 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 TRDCB7Z8K6 153 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 TXNL1O43396 289 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 CLN5O75503 358 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 ARG1P05089 322 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 FBP1P09467 338 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 OR2B8PP59922 312 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 VAMP2P63027 116 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 HEPN1Q6WQI6 88 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 SLC35G3Q8N808 338 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 OR1F12Q8NHA8 337 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 FBXO17Q96EF6 278 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 ZNF385AQ96PM9 386 aaKnown RBP12.01□□□□□ -0.49
MKS1-201ENST00000313863 SPSB2Q99619 263 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 SF3B5Q9BWJ5 86 aaKnown RBP12.01□□□□□ -0.49
MKS1-201ENST00000313863 PAPOLGQ9BWT3 736 aaKnown RBP12.01□□□□□ -0.49
MKS1-201ENST00000313863 PUS1Q9Y606 427 aaKnown RBP eCLIP12.01□□□□□ -0.49
MKS1-201ENST00000313863 CXorf65A6NEN9 183 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 MPPED1O15442 326 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 C1QL1O75973 258 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 HBE1P02100 147 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 LCATP04180 440 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 CD63P08962 238 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 FOSL1P15407 271 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 PPP1CCP36873 323 aaKnown RBP12.01□□□□□ -0.49
MKS1-201ENST00000313863 NKX2-1P43699 371 aaPredicted RBP12.01□□□□□ -0.49
MKS1-201ENST00000313863 RPS23P62266 143 aaKnown RBP12.01□□□□□ -0.49
MKS1-201ENST00000313863 BAXQ07812 192 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 TSPO2Q5TGU0 170 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 PRAMEF20Q5VT98 475 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 RAET1LQ5VY80 246 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 TMEM42Q69YG0 159 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 DPPA3Q6W0C5 159 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 DPPA2Q7Z7J5 298 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 WDR5BQ86VZ2 330 aa12.01□□□□□ -0.49
MKS1-201ENST00000313863 FBXL14Q8N1E6 418 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 103.2 ms