RNA–Protein interactions for RNA: ENST00000311487.9

HMGA1-201, Transcript of high mobility group AT-hook 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene HMGA1, Length 1,920 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA1-201ENST00000311487 LGALS14Q8TCE9 139 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 FAM168AQ92567 244 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 BPESC1Q9GZL8 116 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 BANF2Q9H503 90 aa15.25■□□□□ 0.03
HMGA1-201ENST00000311487 ANKHD1-EIF4EBP3H7C0V5 636 aaPredicted RBP15.24■□□□□ 0.03
HMGA1-201ENST00000311487 NXPH2O95156 264 aa15.24■□□□□ 0.03
HMGA1-201ENST00000311487 HTR3BO95264 441 aa15.24■□□□□ 0.03
HMGA1-201ENST00000311487 LHBP01229 141 aa15.24■□□□□ 0.03
HMGA1-201ENST00000311487 IL24Q13007 206 aa15.24■□□□□ 0.03
HMGA1-201ENST00000311487 PLA2G7Q13093 441 aa15.24■□□□□ 0.03
HMGA1-201ENST00000311487 RSU1Q15404 277 aa15.24■□□□□ 0.03
HMGA1-201ENST00000311487 NKAIN3Q8N8D7 197 aa15.24■□□□□ 0.03
HMGA1-201ENST00000311487 ZNF671Q8TAW3 534 aa15.24■□□□□ 0.03
HMGA1-201ENST00000311487 NINJ1Q92982 152 aa15.24■□□□□ 0.03
HMGA1-201ENST00000311487 CYYR1Q96J86 154 aa15.24■□□□□ 0.03
HMGA1-201ENST00000311487 CHODLQ9H9P2 273 aa15.24■□□□□ 0.03
HMGA1-201ENST00000311487 ZNF581Q9P0T4 197 aa15.24■□□□□ 0.03
HMGA1-201ENST00000311487 WIPI2Q9Y4P8 454 aa15.24■□□□□ 0.03
HMGA1-201ENST00000311487 MEGF11A6BM72 1044 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 TRAPPC2LH3BP13 241 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 GYPAP02724 150 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 PGA5P0DJD9 388 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 PAX1P15863 534 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 MPZP25189 248 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 HTR2CP28335 458 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 CLEC2AQ6UVW9 174 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 WFDC11Q8NEX6 87 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 OR51D1Q8NGF3 324 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 Q8TCH9 128 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 MBD6Q96DN6 1003 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 S100A13Q99584 98 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 DLL4Q9NR61 685 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 DNAJB11Q9UBS4 358 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 OR14J1Q9UGF5 321 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 A0A1B0GW55 424 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 CYB5AP00167 134 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 DUX4L2P0CJ85 424 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 DUX4L3P0CJ86 424 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 DUX4L4P0CJ87 422 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 DUX4L5P0CJ88 424 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 DUX4L6P0CJ89 424 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 DUX4L7P0CJ90 424 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 PRKACAP17612 351 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 PYHIN1Q6K0P9 492 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 DUX4L9Q6RFH8 374 aaPredicted RBP15.23■□□□□ 0.03
HMGA1-201ENST00000311487 KRTAP1-3Q8IUG1 177 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 MKXQ8IYA7 352 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 TMEM104Q8NE00 496 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 EMG1Q92979 244 aaKnown RBP15.23■□□□□ 0.03
HMGA1-201ENST00000311487 ABHD1Q96SE0 405 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 PKIBQ9C010 78 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 DUX4Q9UBX2 424 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 POLDIP2Q9Y2S7 368 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 TANC2Q9HCD6 1990 aa15.23■□□□□ 0.03
HMGA1-201ENST00000311487 TMEM127O75204 238 aa15.22■□□□□ 0.03
HMGA1-201ENST00000311487 GPR6P46095 362 aaPredicted RBP15.22■□□□□ 0.03
HMGA1-201ENST00000311487 PDLIM4P50479 330 aa15.22■□□□□ 0.03
HMGA1-201ENST00000311487 RAB11BQ15907 218 aa15.22■□□□□ 0.03
HMGA1-201ENST00000311487 PIGYQ3MUY2 71 aa15.22■□□□□ 0.03
HMGA1-201ENST00000311487 UBE2NLQ5JXB2 153 aa15.22■□□□□ 0.03
HMGA1-201ENST00000311487 FAM90A1Q86YD7 464 aa15.22■□□□□ 0.03
HMGA1-201ENST00000311487 TRIM63Q969Q1 353 aa15.22■□□□□ 0.03
HMGA1-201ENST00000311487 ERGIC1Q969X5 290 aa15.22■□□□□ 0.03
HMGA1-201ENST00000311487 SLC25A28Q96A46 364 aa15.22■□□□□ 0.03
HMGA1-201ENST00000311487 Q96MF0 132 aa15.22■□□□□ 0.03
HMGA1-201ENST00000311487 CMTM3Q96MX0 182 aa15.22■□□□□ 0.03
HMGA1-201ENST00000311487 NRIP2Q9BQI9 281 aa15.22■□□□□ 0.03
HMGA1-201ENST00000311487 MMP28Q9H239 520 aa15.22■□□□□ 0.03
HMGA1-201ENST00000311487 BARX1Q9HBU1 254 aaPredicted RBP15.22■□□□□ 0.03
HMGA1-201ENST00000311487 NPTNQ9Y639 398 aa15.22■□□□□ 0.03
HMGA1-201ENST00000311487 PPIAL4EA0A075B759 164 aa15.21■□□□□ 0.03
HMGA1-201ENST00000311487 SRRM5B3KS81 715 aa15.21■□□□□ 0.03
HMGA1-201ENST00000311487 PPIAL4DF5H284 164 aa15.21■□□□□ 0.03
HMGA1-201ENST00000311487 LANCL1O43813 399 aa15.21■□□□□ 0.03
HMGA1-201ENST00000311487 PPIAL4FP0DN26 164 aa15.21■□□□□ 0.03
HMGA1-201ENST00000311487 BTG1P62324 171 aa15.21■□□□□ 0.03
HMGA1-201ENST00000311487 LYPD2Q6UXB3 125 aa15.21■□□□□ 0.03
HMGA1-201ENST00000311487 POC1AQ8NBT0 407 aa15.21■□□□□ 0.03
HMGA1-201ENST00000311487 C10orf105Q8TEF2 133 aa15.21■□□□□ 0.03
HMGA1-201ENST00000311487 CHAC2Q8WUX2 184 aa15.21■□□□□ 0.03
HMGA1-201ENST00000311487 HPS1Q92902 700 aa15.21■□□□□ 0.03
HMGA1-201ENST00000311487 LIN7BQ9HAP6 207 aa15.21■□□□□ 0.03
HMGA1-201ENST00000311487 PPIAL4AQ9Y536 164 aa15.21■□□□□ 0.03
HMGA1-201ENST00000311487 OTOGQ6ZRI0 2925 aa15.21■□□□□ 0.03
HMGA1-201ENST00000311487 ITPR3Q14573 2671 aa15.21■□□□□ 0.03
HMGA1-201ENST00000311487 CRTAPO75718 401 aaPredicted RBP15.21■□□□□ 0.02
HMGA1-201ENST00000311487 ARSBP15848 533 aa15.21■□□□□ 0.02
HMGA1-201ENST00000311487 GABRA2P47869 451 aa15.21■□□□□ 0.02
HMGA1-201ENST00000311487 ACP7Q6ZNF0 438 aa15.21■□□□□ 0.02
HMGA1-201ENST00000311487 SLC25A38Q96DW6 304 aa15.21■□□□□ 0.02
HMGA1-201ENST00000311487 C1orf147Q96MC9 270 aaPredicted RBP15.21■□□□□ 0.02
HMGA1-201ENST00000311487 UQCC2Q9BRT2 126 aa15.21■□□□□ 0.02
HMGA1-201ENST00000311487 METTL9Q9H1A3 318 aa15.21■□□□□ 0.02
HMGA1-201ENST00000311487 OOEPA6NGQ2 149 aa15.2■□□□□ 0.02
HMGA1-201ENST00000311487 RFPL4AA6NLU0 287 aa15.2■□□□□ 0.02
HMGA1-201ENST00000311487 RFPL4AL1F8VTS6 287 aa15.2■□□□□ 0.02
HMGA1-201ENST00000311487 SLC17A2O00624 439 aa15.2■□□□□ 0.02
HMGA1-201ENST00000311487 LYRM1O43325 122 aa15.2■□□□□ 0.02
HMGA1-201ENST00000311487 SELLP14151 372 aa15.2■□□□□ 0.02
HMGA1-201ENST00000311487 NR4A2P43354 598 aa15.2■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms