RNA–Protein interactions for RNA: ENST00000309328.7

SSSCA1-201, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SSSCA1, Length 698 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-201ENST00000309328 WDR25Q64LD2 544 aaPredicted RBP14.91□□□□□ -0.02
SSSCA1-201ENST00000309328 FAM166AQ6J272 317 aa14.91□□□□□ -0.02
SSSCA1-201ENST00000309328 CROCCP3Q8IVE0 287 aa14.91□□□□□ -0.02
SSSCA1-201ENST00000309328 OSR2Q8N2R0 312 aa14.91□□□□□ -0.02
SSSCA1-201ENST00000309328 TEX29Q8N6K0 151 aa14.91□□□□□ -0.02
SSSCA1-201ENST00000309328 MAPK1IP1LQ8NDC0 245 aa14.91□□□□□ -0.02
SSSCA1-201ENST00000309328 OR5T2Q8NGG2 359 aa14.91□□□□□ -0.02
SSSCA1-201ENST00000309328 OR5D13Q8NGL4 314 aa14.91□□□□□ -0.02
SSSCA1-201ENST00000309328 GAFA1Q96PS6 74 aa14.91□□□□□ -0.02
SSSCA1-201ENST00000309328 CCL13Q99616 98 aa14.91□□□□□ -0.02
SSSCA1-201ENST00000309328 OR14J1Q9UGF5 321 aa14.91□□□□□ -0.02
SSSCA1-201ENST00000309328 AK6Q9Y3D8 172 aaKnown RBP14.91□□□□□ -0.02
SSSCA1-201ENST00000309328 ZNF469Q96JG9 3925 aaPredicted RBP14.91□□□□□ -0.02
SSSCA1-201ENST00000309328 FAM90A10PA6NDY2 464 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 FAM90A18PA6NE21 464 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 FAM90A16PA6NEW6 464 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 FAM90A20PA6NIJ5 464 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 FAM90A8PA6NJQ4 464 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 FAM90A7PA6NKC0 464 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 FAM90A22PA8MWA6 464 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 FAM90A12PA8MX19 464 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 FAM90A5PA8MXJ8 464 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 FAM90A23PA8MXZ1 464 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 F8VVB4 439 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 F8VWA3 439 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 AIPO00170 330 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 CDRT1O95170 752 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 HTR3BO95264 441 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 HAND1O96004 215 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 LIPFP07098 398 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 FAM90A15PP0C7V4 464 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 FAM90A13PP0C7W8 464 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 FAM90A14PP0C7W9 464 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 FAM90A24PP0C7X0 464 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 HNRNPA0Q13151 305 aaKnown RBP14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 MPV17LQ2QL34 196 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 ZNF841Q6ZN19 808 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 OR2W3Q7Z3T1 314 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 C1QL2Q7Z5L3 287 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 ANKRD13BQ86YJ7 626 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 LURAP1LQ8IV03 231 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 OR4D6Q8NGJ1 314 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 KCNG3Q8TAE7 436 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 TMEM186Q96B77 213 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 MSI2Q96DH6 328 aaKnown RBP14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 SEH1LQ96EE3 360 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 FUNDC2Q9BWH2 189 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 IFT22Q9H7X7 185 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 SPACA1Q9HBV2 294 aa14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 SLC25A10Q9UBX3 287 aaPredicted RBP14.9□□□□□ -0.02
SSSCA1-201ENST00000309328 TRBV23-1A0A0A0MS06 115 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 A0A0G2JMP0 313 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 A0A0X1KG70 313 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 IFITM5A6NNB3 132 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 NOTOA8MTQ0 251 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 FAM157AC9JC47 383 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 J3QLI3 93 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 DVL1O14640 695 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 TGFAP01135 160 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 ARSBP15848 533 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 SERPINA2P20848 420 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 KCNJ3P48549 501 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 RBM11P57052 281 aaKnown RBP14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 HOXA4Q00056 320 aaPredicted RBP14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 LYPD2Q6UXB3 125 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 BTNL3Q6UXE8 466 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 RNF144BQ7Z419 303 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 OR4M2Q8NGB6 313 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 SNX22Q96L94 193 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 BCL7BQ9BQE9 202 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 MRI1Q9BV20 369 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 CTSZQ9UBR2 303 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 FBLN5Q9UBX5 448 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 STEAP1Q9UHE8 339 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 KCNS2Q9ULS6 477 aa14.89□□□□□ -0.03
SSSCA1-201ENST00000309328 LOC105371242A0A075B767 164 aa14.88□□□□□ -0.03
SSSCA1-201ENST00000309328 FUOMA2VDF0 154 aa14.88□□□□□ -0.03
SSSCA1-201ENST00000309328 K7N7A8 449 aa14.88□□□□□ -0.03
SSSCA1-201ENST00000309328 ENSAO43768 121 aaKnown RBP14.88□□□□□ -0.03
SSSCA1-201ENST00000309328 LMO1P25800 156 aa14.88□□□□□ -0.03
SSSCA1-201ENST00000309328 RBMXP38159 391 aaKnown RBP14.88□□□□□ -0.03
SSSCA1-201ENST00000309328 SCAND1P57086 179 aa14.88□□□□□ -0.03
SSSCA1-201ENST00000309328 CLEC9AQ6UXN8 241 aa14.88□□□□□ -0.03
SSSCA1-201ENST00000309328 CD177Q8N6Q3 437 aa14.88□□□□□ -0.03
SSSCA1-201ENST00000309328 FAM216BQ8N7L0 139 aa14.88□□□□□ -0.03
SSSCA1-201ENST00000309328 ASCC1Q8N9N2 400 aaKnown RBP14.88□□□□□ -0.03
SSSCA1-201ENST00000309328 TMEM185AQ8NFB2 350 aa14.88□□□□□ -0.03
SSSCA1-201ENST00000309328 C1orf147Q96MC9 270 aaPredicted RBP14.88□□□□□ -0.03
SSSCA1-201ENST00000309328 CENPOQ9BU64 300 aa14.88□□□□□ -0.03
SSSCA1-201ENST00000309328 TMEM160Q9NX00 188 aa14.88□□□□□ -0.03
SSSCA1-201ENST00000309328 LPAR3Q9UBY5 353 aa14.88□□□□□ -0.03
SSSCA1-201ENST00000309328 ST3GAL6Q9Y274 331 aa14.88□□□□□ -0.03
SSSCA1-201ENST00000309328 MAB21L2Q9Y586 359 aa14.88□□□□□ -0.03
SSSCA1-201ENST00000309328 A0A1W2PPH5 198 aa14.87□□□□□ -0.03
SSSCA1-201ENST00000309328 KIAA1324LA8MWY0 1029 aaPredicted RBP14.87□□□□□ -0.03
SSSCA1-201ENST00000309328 DEGS1O15121 323 aa14.87□□□□□ -0.03
SSSCA1-201ENST00000309328 CRTAPO75718 401 aaPredicted RBP14.87□□□□□ -0.03
SSSCA1-201ENST00000309328 GABARAPO95166 117 aa14.87□□□□□ -0.03
SSSCA1-201ENST00000309328 IL1AP01583 271 aa14.87□□□□□ -0.03
SSSCA1-201ENST00000309328 CSN2P05814 226 aa14.87□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 674.9 ms