RNA–Protein interactions for RNA: ENST00000306726.6

PTPN9-201, Transcript of protein tyrosine phosphatase, non-receptor type 9, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PTPN9, Length 3,862 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN9-201ENST00000306726 THNSL2Q86YJ6 484 aa12.75□□□□□ -0.37
PTPN9-201ENST00000306726 OR14L1PQ8NHC6 308 aa12.75□□□□□ -0.37
PTPN9-201ENST00000306726 A0A1B0GX78 115 aa12.75□□□□□ -0.37
PTPN9-201ENST00000306726 RAB5AP20339 215 aa12.75□□□□□ -0.37
PTPN9-201ENST00000306726 NKX6-1P78426 367 aaPredicted RBP12.75□□□□□ -0.37
PTPN9-201ENST00000306726 OR8G2PQ6IF36 304 aa12.75□□□□□ -0.37
PTPN9-201ENST00000306726 ZNF880Q6PDB4 577 aa12.75□□□□□ -0.37
PTPN9-201ENST00000306726 SLC43A2Q8N370 569 aa12.75□□□□□ -0.37
PTPN9-201ENST00000306726 PRRG4Q9BZD6 226 aa12.75□□□□□ -0.37
PTPN9-201ENST00000306726 GAB2Q9UQC2 676 aa12.75□□□□□ -0.37
PTPN9-201ENST00000306726 IGKV1-9A0A0C4DH69 117 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 MBPP02686 304 aaPredicted RBP12.74□□□□□ -0.37
PTPN9-201ENST00000306726 OTX2P32243 289 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 ZNF345Q14585 488 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 SHBQ15464 509 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 TSC22D1Q15714 1073 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 PHYHIPLQ96FC7 376 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 OCSTAMPQ9BR26 566 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 CHRNA10Q9GZZ6 450 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 JTBO76095 146 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 IFNA17P01571 189 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 RNF224P0DH78 156 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 DVL1P1P54792 670 aaPredicted RBP12.74□□□□□ -0.37
PTPN9-201ENST00000306726 ROM1Q03395 351 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 MPV17LQ2QL34 196 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 SNAI3Q3KNW1 292 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 UQCC3Q6UW78 93 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 PRSS33Q8NF86 280 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 OR1K1Q8NGR3 316 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 OR5C1Q8NGR4 320 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 GPR61Q9BZJ8 451 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 PTRH2Q9Y3E5 179 aaKnown RBP12.74□□□□□ -0.37
PTPN9-201ENST00000306726 APC2O95996 2303 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 PROB1E7EW31 1015 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 TOX3O15405 576 aaPredicted RBP12.74□□□□□ -0.37
PTPN9-201ENST00000306726 ST8SIA3O43173 380 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 CST4P01036 141 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 H2AFB1P0C5Y9 115 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 FPR2P25090 351 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 CHATP28329 748 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 CXorf66Q5JRM2 361 aaPredicted RBP12.74□□□□□ -0.37
PTPN9-201ENST00000306726 KMT5CQ86Y97 462 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 ZNF383Q8NA42 475 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 PBDC1Q9BVG4 233 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 TMEM9BQ9NQ34 198 aa12.74□□□□□ -0.37
PTPN9-201ENST00000306726 EFNA2O43921 213 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 RHEBQ15382 184 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 SPATA46Q5T0L3 261 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 FIP1L1Q6UN15 594 aaKnown RBP12.73□□□□□ -0.37
PTPN9-201ENST00000306726 SLC25A45Q8N413 288 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 EMG1Q92979 244 aaKnown RBP12.73□□□□□ -0.37
PTPN9-201ENST00000306726 ZNF816-ZNF321PA0A0X1KG74 233 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 NKX2-6A6NCS4 301 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 CLN5O75503 358 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 IGHV3-13P01766 116 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 IGHV3-7P01780 117 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 CD79AP11912 226 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 MMP16P51512 607 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 ZNF561Q8N587 486 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 ZNF488Q96MN9 340 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 RAB18Q9NP72 206 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 SLC17A5Q9NRA2 495 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 SNAPC5O75971 98 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 CALCRP30988 508 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 TCF15Q12870 199 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 ZNF154Q13106 437 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 ISXQ2M1V0 245 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 DBX2Q6ZNG2 339 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 CPNE4Q96A23 557 aaPredicted RBP12.73□□□□□ -0.37
PTPN9-201ENST00000306726 RPUSD4Q96CM3 377 aaKnown RBP12.73□□□□□ -0.37
PTPN9-201ENST00000306726 SNX22Q96L94 193 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 KPTNQ9Y664 436 aa12.73□□□□□ -0.37
PTPN9-201ENST00000306726 TGIF2-C20orf24A0A0A6YYL0 155 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 LIPT2A6NK58 231 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 B2MP61769 119 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 ADIRFQ15847 76 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 MST1LQ2TV78 715 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 WDR25Q64LD2 544 aaPredicted RBP12.72□□□□□ -0.37
PTPN9-201ENST00000306726 ARRDC1Q8N5I2 433 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 KCNK17Q96T54 332 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 UTP23Q9BRU9 249 aaKnown RBP12.72□□□□□ -0.37
PTPN9-201ENST00000306726 COA4Q9NYJ1 87 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 RNF150Q9ULK6 438 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 COLCA2A8K830 154 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 TSPAN2O60636 221 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 OR2T2Q6IF00 324 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 PLPP5Q8NEB5 264 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 MFRPQ9BY79 579 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 TOLLIPQ9H0E2 274 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 FAM234AQ9H0X4 552 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 METTL9Q9H1A3 318 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 PLA2G3Q9NZ20 509 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 CEBPZOSA8MTT3 80 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 CD1AP06126 327 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 FAM157CP0CG43 387 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 IGFBP3P17936 291 aaPredicted RBP12.72□□□□□ -0.37
PTPN9-201ENST00000306726 ACKR3P25106 362 aa12.72□□□□□ -0.37
PTPN9-201ENST00000306726 NKX2-1P43699 371 aaPredicted RBP12.72□□□□□ -0.37
PTPN9-201ENST00000306726 IDH3GP51553 393 aaPredicted RBP12.72□□□□□ -0.37
PTPN9-201ENST00000306726 C1orf100Q5SVJ3 147 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 54.3 ms