RNA–Protein interactions for RNA: ENST00000306042.9

PTPRE-202, Transcript of protein tyrosine phosphatase, receptor type E, humanhuman

TSL 1 (best) BASIC

Gene PTPRE, Length 4,957 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRE-202ENST00000306042 DOLPP1Q86YN1 238 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 ARHGAP5-AS1Q96IT6 56 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 FYTTD1Q96QD9 318 aaKnown RBP8.04□□□□□ -1.12
PTPRE-202ENST00000306042 RBMX2Q9Y388 322 aaKnown RBP8.04□□□□□ -1.12
PTPRE-202ENST00000306042 WIPI2Q9Y4P8 454 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 OTOGLQ3ZCN5 2332 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 IGHV1-69-2A0A0G2JMI3 117 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 ZIC2O95409 532 aaPredicted RBP8.04□□□□□ -1.12
PTPRE-202ENST00000306042 TBPP20226 339 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 GZMHP20718 246 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 TLE4Q04727 773 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 SLC25A30Q5SVS4 291 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 ZNF626Q68DY1 528 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 C6orf201Q7Z4U5 140 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 OR8H3Q8N146 312 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 OR10AC1Q8NH08 325 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 DPCDQ9BVM2 203 aaPredicted RBP8.04□□□□□ -1.12
PTPRE-202ENST00000306042 WNT5BQ9H1J7 359 aa8.04□□□□□ -1.12
PTPRE-202ENST00000306042 SULT1C2O00338 296 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 IFNA1P01562 189 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 ADH4P08319 380 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 LSAMPQ13449 338 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 GK2Q14410 553 aaPredicted RBP8.03□□□□□ -1.12
PTPRE-202ENST00000306042 LHFPL6Q9Y693 200 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 FAM208BQ5VWN6 2430 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 WISP1O95388 367 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 IL18BPO95998 194 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 IGHV3-13P01766 116 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 IGHV3-7P01780 117 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 IGHA1P01876 353 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 GYPAP02724 150 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 KITLGP21583 273 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 GALP22466 123 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 HRH1P35367 487 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 ERHP84090 104 aaKnown RBP8.03□□□□□ -1.12
PTPRE-202ENST00000306042 CEACAM21Q3KPI0 293 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 DMKNQ6E0U4 476 aaPredicted RBP8.03□□□□□ -1.12
PTPRE-202ENST00000306042 TAAR6Q96RI8 345 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 CCL13Q99616 98 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.03□□□□□ -1.12
PTPRE-202ENST00000306042 C1RLQ9NZP8 487 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 J3QW42 95 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 GPR37O15354 613 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 ONECUT2O95948 504 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 HIST1H1DP16402 221 aaKnown RBP8.03□□□□□ -1.12
PTPRE-202ENST00000306042 PTBP1P26599 531 aaKnown RBP eCLIP8.03□□□□□ -1.12
PTPRE-202ENST00000306042 HBG1P69891 147 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 HBG2P69892 147 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 PDZK1IP1Q13113 114 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 CMTM3Q96MX0 182 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 CACFD1Q9UGQ2 172 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.03□□□□□ -1.12
PTPRE-202ENST00000306042 A0A1W2PPV4 95 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 PYCARD-AS1I3L0S3 204 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 OGG1O15527 345 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 XRCC3O43542 346 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 TTRP02766 147 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 FGF9P31371 208 aaPredicted RBP8.03□□□□□ -1.12
PTPRE-202ENST00000306042 PRDX2P32119 198 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 CA7P43166 264 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 ZNF616Q08AN1 781 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 APH1BQ8WW43 257 aa8.03□□□□□ -1.12
PTPRE-202ENST00000306042 SF3B6Q9Y3B4 125 aaKnown RBP8.03□□□□□ -1.12
PTPRE-202ENST00000306042 IGHMP01871 453 aa8.02□□□□□ -1.12
PTPRE-202ENST00000306042 OR8U8P0C7N1 319 aa8.02□□□□□ -1.12
PTPRE-202ENST00000306042 IAH1Q2TAA2 248 aaPredicted RBP8.02□□□□□ -1.12
PTPRE-202ENST00000306042 TEX30Q5JUR7 227 aa8.02□□□□□ -1.12
PTPRE-202ENST00000306042 ABLIM2Q6H8Q1 611 aa8.02□□□□□ -1.12
PTPRE-202ENST00000306042 ZNF770Q6IQ21 691 aaPredicted RBP8.02□□□□□ -1.12
PTPRE-202ENST00000306042 RPUSD3Q6P087 351 aaKnown RBP8.02□□□□□ -1.12
PTPRE-202ENST00000306042 UBAC2Q8NBM4 344 aa8.02□□□□□ -1.12
PTPRE-202ENST00000306042 SCMH1Q96GD3 660 aa8.02□□□□□ -1.12
PTPRE-202ENST00000306042 PRDM14Q9GZV8 571 aa8.02□□□□□ -1.12
PTPRE-202ENST00000306042 ATPIF1Q9UII2 106 aa8.02□□□□□ -1.12
PTPRE-202ENST00000306042 MED12Q93074 2177 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 NEU4Q8WWR8 484 aaPredicted RBP8.02□□□□□ -1.13
PTPRE-202ENST00000306042 FAM168AQ92567 244 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 BCL2L2Q92843 193 aaPredicted RBP8.02□□□□□ -1.13
PTPRE-202ENST00000306042 GCM1Q9NP62 436 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 YAE1D1Q9NRH1 226 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 PLEKHB1Q9UF11 243 aaPredicted RBP8.02□□□□□ -1.13
PTPRE-202ENST00000306042 MIOXQ9UGB7 285 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 PITPNC1Q9UKF7 332 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 NXPH3O95157 252 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 DGCR2P98153 550 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 MPV17LQ2QL34 196 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 UNQ9370/PRO34162Q6UXP9 181 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 GIMAP1Q8WWP7 306 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 GPR61Q9BZJ8 451 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 KLHDC2Q9Y2U9 406 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 MED19A0JLT2 244 aaPredicted RBP8.02□□□□□ -1.13
PTPRE-202ENST00000306042 FOXH1O75593 365 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 HRASP01112 189 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 RAB6AP20340 208 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 OMGP23515 440 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 ERVFRD-1P60508 538 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 INSL4Q14641 139 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 SLC35E1Q96K37 410 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 RNF122Q9H9V4 155 aa8.02□□□□□ -1.13
PTPRE-202ENST00000306042 TMEM272A0A1B0GTI8 110 aa8.01□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms