RNA–Protein interactions for RNA: ENST00000304465.7

SRGAP2C-201, Transcript of SLIT-ROBO Rho GTPase activating protein 2C, humanhuman

TSL 5 BASIC

Gene SRGAP2C, Length 1,477 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP2C-201ENST00000304465 DTX3Q8N9I9 347 aa13.43□□□□□ -0.26
SRGAP2C-201ENST00000304465 DVL3Q92997 716 aaPredicted RBP13.43□□□□□ -0.26
SRGAP2C-201ENST00000304465 SRRQ9GZT4 340 aa13.43□□□□□ -0.26
SRGAP2C-201ENST00000304465 RHBDL2Q9NX52 303 aa13.43□□□□□ -0.26
SRGAP2C-201ENST00000304465 EXTL2Q9UBQ6 330 aa13.43□□□□□ -0.26
SRGAP2C-201ENST00000304465 MRPS28Q9Y2Q9 187 aaKnown RBP13.43□□□□□ -0.26
SRGAP2C-201ENST00000304465 MPC1Q9Y5U8 109 aa13.43□□□□□ -0.26
SRGAP2C-201ENST00000304465 ANK3Q12955 4377 aaKnown RBP13.43□□□□□ -0.26
SRGAP2C-201ENST00000304465 FAM230AA0A1W2PPH8 454 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 FABP12A6NFH5 140 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 MLNRO43193 412 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 CA6P23280 308 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 RBP2P50120 134 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 MADCAM1Q13477 382 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 ZMYND11Q15326 602 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 ESCO2Q56NI9 601 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 GLIPR1L1Q6UWM5 242 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 LHFPL2Q6ZUX7 228 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 FTMTQ8N4E7 242 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 OR5D18Q8NGL1 313 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 OR11L1Q8NGX0 322 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 BORCS5Q969J3 196 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 PTX4Q96A99 478 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 C7orf69Q9H7B7 122 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 PATZ1Q9HBE1 687 aaKnown RBP13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 ADAM30Q9UKF2 790 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 SLC7A11Q9UPY5 501 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 FBN1P35555 2871 aaKnown RBP13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 LOC105371242A0A075B767 164 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 ANKRD30BLA7E2S9 258 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 FAM25AB3EWG3 89 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 FAM25CB3EWG5 89 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 FAM25GB3EWG6 89 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 PTBP1P26599 531 aaKnown RBP eCLIP13.42□□□□□ -0.263e-14■■■■■ 51.7
SRGAP2C-201ENST00000304465 SRSF2Q01130 221 aaKnown RBP13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 DCTN2Q13561 401 aaKnown RBP13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 KRTAP24-1Q3LI83 254 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 AWAT2Q6E213 333 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 FAM131AQ6UXB0 335 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 CALHM1Q8IU99 346 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 SNX29P2Q8IUI4 249 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 CELF2-AS1Q8N7Q2 184 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 TMEM104Q8NE00 496 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 OR5A2Q8NGI9 324 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 ZNF418Q8TF45 676 aaPredicted RBP13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 RAB40AQ8WXH6 277 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 ERGIC1Q969X5 290 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 BORCS8Q96FH0 119 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 ABHD1Q96SE0 405 aa13.42□□□□□ -0.26
SRGAP2C-201ENST00000304465 IGKV1-12A0A0C4DH73 117 aa13.41□□□□□ -0.26
SRGAP2C-201ENST00000304465 A0A1W2PP11 408 aa13.41□□□□□ -0.26
SRGAP2C-201ENST00000304465 CYB5R3P00387 301 aaPredicted RBP13.41□□□□□ -0.26
SRGAP2C-201ENST00000304465 IGKV1D-12P01611 117 aa13.41□□□□□ -0.26
SRGAP2C-201ENST00000304465 OCMP0CE72 109 aaPredicted RBP13.41□□□□□ -0.26
SRGAP2C-201ENST00000304465 RAB6AP20340 208 aa13.41□□□□□ -0.26
SRGAP2C-201ENST00000304465 ZNF181Q2M3W8 571 aa13.41□□□□□ -0.26
SRGAP2C-201ENST00000304465 FAM76BQ5HYJ3 339 aa13.41□□□□□ -0.26
SRGAP2C-201ENST00000304465 WDR86Q86TI4 376 aa13.41□□□□□ -0.26
SRGAP2C-201ENST00000304465 NANPQ8TBE9 248 aa13.41□□□□□ -0.26
SRGAP2C-201ENST00000304465 TNFAIP8L1Q8WVP5 186 aa13.41□□□□□ -0.26
SRGAP2C-201ENST00000304465 GPER1Q99527 375 aa13.41□□□□□ -0.26
SRGAP2C-201ENST00000304465 ADAT1Q9BUB4 502 aaKnown RBP13.41□□□□□ -0.26
SRGAP2C-201ENST00000304465 C19orf24Q9BVV8 132 aa13.41□□□□□ -0.26
SRGAP2C-201ENST00000304465 TMPRSS13Q9BYE2 586 aa13.41□□□□□ -0.26
SRGAP2C-201ENST00000304465 DYSFO75923 2080 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 TANC2Q9HCD6 1990 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 PPIAL4EA0A075B759 164 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 A0A0A6YYJ9 748 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 PPIAL4CA0A0B4J2A2 164 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 ZNF732B4DXR9 585 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 PPIAL4DF5H284 164 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 SPRY1O43609 319 aaPredicted RBP13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 KDM4BO94953 1096 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 ZNF205O95201 554 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 HLA-DQB1P01920 261 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 UBBP0CG47 229 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 PPIAL4FP0DN26 164 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 EPHA1P21709 976 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 CDK2P24941 298 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 RBMXP38159 391 aaKnown RBP13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 GPM6AP51674 278 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 CAPZA1P52907 286 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 ATP1B3P54709 279 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 MZT1Q08AG7 82 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 PDZK1IP1Q13113 114 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 OR2W3Q7Z3T1 314 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 NEK6Q9HC98 313 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 GHRLQ9UBU3 117 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 MIOXQ9UGB7 285 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 RAB22AQ9UL26 194 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 MXRA5Q9NR99 2828 aa13.4□□□□□ -0.26
SRGAP2C-201ENST00000304465 A0A0A6YYD4 124 aa13.39□□□□□ -0.27
SRGAP2C-201ENST00000304465 OR5B21A6NL26 309 aa13.39□□□□□ -0.27
SRGAP2C-201ENST00000304465 CEACAM18A8MTB9 384 aa13.39□□□□□ -0.27
SRGAP2C-201ENST00000304465 ANGPTL7O43827 346 aa13.39□□□□□ -0.27
SRGAP2C-201ENST00000304465 RPS2P15880 293 aaKnown RBP13.39□□□□□ -0.27
SRGAP2C-201ENST00000304465 CPT2P23786 658 aa13.39□□□□□ -0.27
SRGAP2C-201ENST00000304465 ZFP36P26651 326 aaKnown RBP13.39□□□□□ -0.27
SRGAP2C-201ENST00000304465 CD200P41217 278 aa13.39□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms