RNA–Protein interactions for RNA: ENST00000302278.7

ITGB1-201, Transcript of integrin subunit beta 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene ITGB1, Length 3,640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB1-201ENST00000302278 A0A1B0GTI1 187 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 HMGB1P1B2RPK0 211 aaPredicted RBP5.05□□□□□ -1.6
ITGB1-201ENST00000302278 LDLRAD4O15165 306 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 IGF1P05019 195 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 FABP3P05413 133 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 SNRNP70P08621 437 aaKnown RBP5.05□□□□□ -1.6
ITGB1-201ENST00000302278 FAM106CPP0CH98 169 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 PSMB8P28062 276 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 PRDX6P30041 224 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 RRM2P31350 389 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 OR3A1P47881 315 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 RAB7AP51149 207 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 ZNF816Q0VGE8 651 aaPredicted RBP5.05□□□□□ -1.6
ITGB1-201ENST00000302278 DMRTC1Q5HYR2 192 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 PLCXD3Q63HM9 321 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 GDPD3Q7L5L3 318 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 ZNF429Q86V71 674 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 TGIF2LXQ8IUE1 241 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 ABHD12Q8N2K0 398 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 OR6N2Q8NGY6 317 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 ZNF488Q96MN9 340 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 PBOV1Q9GZY1 135 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 ZNF286AQ9HBT8 521 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 LIN7CQ9NUP9 197 aaKnown RBP5.05□□□□□ -1.6
ITGB1-201ENST00000302278 INTS9Q9NV88 658 aaKnown RBP5.05□□□□□ -1.6
ITGB1-201ENST00000302278 CHCHD3Q9NX63 227 aaKnown RBP5.05□□□□□ -1.6
ITGB1-201ENST00000302278 MTCH1Q9NZJ7 389 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP5.05□□□□□ -1.64e-6■■□□□ 13.2
ITGB1-201ENST00000302278 A0A0G2JND7 137 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 NXPH2O95156 264 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 GASTP01350 101 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 COX4I1P13073 169 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 H2AFXP16104 143 aaPredicted RBP5.05□□□□□ -1.6
ITGB1-201ENST00000302278 PEX2P28328 305 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 HAAOP46952 286 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 CEP78Q5JTW2 689 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 ASPHD1Q5U4P2 390 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 MOB3CQ70IA8 216 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 ERI1Q8IV48 349 aaKnown RBP5.05□□□□□ -1.6
ITGB1-201ENST00000302278 OR8H3Q8N146 312 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 OR51L1Q8NGJ5 315 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 LRGUKQ96M69 825 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 CCDC134Q9H6E4 229 aa5.05□□□□□ -1.6
ITGB1-201ENST00000302278 PCLOQ9Y6V0 5065 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 I3L521 148 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 DIRAS1O95057 198 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 TTRP02766 147 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 GYPBP06028 91 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 FRMD6-AS1P0C7T7 363 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 NCK1P16333 377 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 GPR12P47775 334 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 GMFBP60983 142 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 SNAPC1Q16533 368 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 SLX4IPQ5VYV7 408 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 OR52N4Q8NGI2 321 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 NDNFQ8TB73 568 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 ASB17Q8WXJ9 295 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 ISOC1Q96CN7 298 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 CEP19Q96LK0 163 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 ASCL2Q99929 193 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 ZMAT4Q9H898 229 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 MED4Q9NPJ6 270 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 PIGLQ9Y2B2 252 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 AMMECR1Q9Y4X0 333 aaPredicted RBP5.04□□□□□ -1.6
ITGB1-201ENST00000302278 ZNF729A6NN14 1252 aaPredicted RBP5.04□□□□□ -1.6
ITGB1-201ENST00000302278 RIIAD1A6NNX1 92 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 SEC14L6B5MCN3 397 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 PSMD9O00233 223 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 GDNFP39905 211 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 MNDAP41218 407 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 ECI1P42126 302 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 C17orf58Q2M2W7 97 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 SAMD4BQ5PRF9 694 aaKnown RBP5.04□□□□□ -1.6
ITGB1-201ENST00000302278 KCTD18Q6PI47 426 aaPredicted RBP5.04□□□□□ -1.6
ITGB1-201ENST00000302278 FOXRED2Q8IWF2 684 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 ELMOD2Q8IZ81 293 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 DNAAF1Q8NEP3 725 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 TEAD3Q99594 435 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 TSSK6Q9BXA6 273 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 ABCG5Q9H222 651 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 MAGIXQ9H6Y5 334 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 SPAG4Q9NPE6 437 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 GPR84Q9NQS5 396 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 IGKV1-27A0A075B6S5 117 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 TRBV2A0A0J9YWF9 115 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 PSPNO60542 156 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 ENTPD6O75354 484 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 HAND1O96004 215 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 HCKP08631 526 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 CRIP2P52943 208 aaPredicted RBP5.04□□□□□ -1.6
ITGB1-201ENST00000302278 PRRX1P54821 245 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 PNLIPRP3Q17RR3 467 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 ZNF829Q3KNS6 432 aaPredicted RBP5.04□□□□□ -1.6
ITGB1-201ENST00000302278 C19orf54Q5BKX5 351 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 ZNF679Q8IYX0 411 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 OR6K6Q8NGW6 343 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 CAPSLQ8WWF8 208 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 MNTQ99583 582 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 EFCAB1Q9HAE3 211 aa5.04□□□□□ -1.6
ITGB1-201ENST00000302278 FUOMA2VDF0 154 aa5.03□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms