RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 OR2J1Q9GZK6 312 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 LIME1Q9H400 295 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 PLEKHA2Q9HB19 425 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 ARHGEF17Q96PE2 2063 aaPredicted RBP12.63□□□□□ -0.39
CDT1-201ENST00000301019 FAM230AA0A1W2PPH8 454 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 TP53I11O14683 189 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 LYL1P12980 280 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 EGR1P18146 543 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 TMEM31Q5JXX7 168 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 PHF19Q5T6S3 580 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 FHL5Q5TD97 284 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 LILRA6Q6PI73 481 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 LGI3Q8N145 548 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 TP53RKQ96S44 253 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 ACTR3CQ9C0K3 210 aaPredicted RBP12.63□□□□□ -0.39
CDT1-201ENST00000301019 NAGKQ9UJ70 344 aa12.63□□□□□ -0.39
CDT1-201ENST00000301019 REV3LO60673 3130 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 CYB5R3P00387 301 aaPredicted RBP12.62□□□□□ -0.39
CDT1-201ENST00000301019 BGLAPP02818 100 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 MRPL43Q8N983 215 aaKnown RBP12.62□□□□□ -0.39
CDT1-201ENST00000301019 MFSD9Q8NBP5 474 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 RTN4IP1Q8WWV3 396 aaPredicted RBP12.62□□□□□ -0.39
CDT1-201ENST00000301019 RNF150Q9ULK6 438 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 CABIN1Q9Y6J0 2220 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 IGSF23A1L1A6 192 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 MEGF11A6BM72 1044 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 GNMTQ14749 295 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 CXorf66Q5JRM2 361 aaPredicted RBP12.62□□□□□ -0.39
CDT1-201ENST00000301019 TCF23Q7RTU1 214 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 WDFY1Q8IWB7 410 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 OR52N5Q8NH56 324 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 PIGTQ969N2 578 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 ZNF385AQ96PM9 386 aaKnown RBP12.62□□□□□ -0.39
CDT1-201ENST00000301019 WWTR1Q9GZV5 400 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 DKKL1Q9UK85 242 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 C20orf202A1L168 122 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 CDC14BO60729 498 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 ERGP11308 486 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 DEFA4P12838 97 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 SPINK2P20155 84 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 DYNLT3P51808 116 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 RPS16P62249 146 aaKnown RBP12.62□□□□□ -0.39
CDT1-201ENST00000301019 RBX1P62877 108 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 CARD17Q5XLA6 110 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 LINC00114Q6XXX2 140 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 TMPRSS7Q7RTY8 843 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 S100A7AQ86SG5 101 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 ZNF709Q8N972 641 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 KREMEN2Q8NCW0 462 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 OR10S1Q8NGN2 331 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 OR1N1Q8NGS0 311 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 ZNF764Q96H86 408 aaPredicted RBP12.62□□□□□ -0.39
CDT1-201ENST00000301019 SERGEFQ9UGK8 458 aa12.62□□□□□ -0.39
CDT1-201ENST00000301019 ERRFI1Q9UJM3 462 aaPredicted RBP12.62□□□□□ -0.39
CDT1-201ENST00000301019 PRSS37A4D1T9 235 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 CCL25O15444 150 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 ANGPTL7O43827 346 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 PAX1P15863 534 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 SSPNQ14714 243 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 ZNF321PQ8N8H1 164 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 OR14L1PQ8NHC6 308 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 ZNF160Q9HCG1 818 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 ZNF320A2RRD8 509 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 C5orf63A6NC05 138 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 SHISA7A6NL88 538 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 H0YGG7 62 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 SCDO00767 359 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 CA3P07451 260 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 CDAP32320 146 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 MAS1LP35410 378 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 CDKN1AP38936 164 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 P2RY2P41231 377 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 ARF3P61204 181 aaPredicted RBP12.61□□□□□ -0.39
CDT1-201ENST00000301019 ENDOGQ14249 297 aaKnown RBP12.61□□□□□ -0.39
CDT1-201ENST00000301019 SPIN3Q5JUX0 258 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 ARMC6Q6NXE6 501 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 CLEC2AQ6UVW9 174 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 ZNF440Q8IYI8 595 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 NRSN1Q8IZ57 195 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 ATOH7Q8N100 152 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 NAT6Q93015 286 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 LINC00615Q96LM1 132 aaPredicted RBP12.61□□□□□ -0.39
CDT1-201ENST00000301019 ZNF703Q9H7S9 590 aaPredicted RBP12.61□□□□□ -0.39
CDT1-201ENST00000301019 G6PC2Q9NQR9 355 aa12.61□□□□□ -0.39
CDT1-201ENST00000301019 MCTS1Q9ULC4 181 aaKnown RBP12.61□□□□□ -0.39
CDT1-201ENST00000301019 ST8SIA3O43173 380 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 HPNP05981 417 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 TMEM11P17152 192 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 MSX1P28360 303 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 SHHQ15465 462 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 BCORP1Q8N888 145 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 DTWD2Q8NBA8 298 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 Q8NFD4 153 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 SMIM7Q9BQ49 75 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 OSGIN2Q9Y236 505 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 STRAPQ9Y3F4 350 aaKnown RBP12.6□□□□□ -0.39
CDT1-201ENST00000301019 R4GMQ9 66 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 C5orf67F2Z3F1 127 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 KAT7O95251 611 aa12.6□□□□□ -0.39
CDT1-201ENST00000301019 GSTP1P09211 210 aaKnown RBP12.6□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms