RNA–Protein interactions for RNA: ENST00000299866.12

TVP23A-201, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene TVP23A, Length 3,360 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-201ENST00000299866 C18orf12Q96KH6 178 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 CABLES2Q9BTV7 478 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 NDUFAF3Q9BU61 184 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 RPP25Q9BUL9 199 aaKnown RBP11.36□□□□□ -0.59
TVP23A-201ENST00000299866 MOB1AQ9H8S9 216 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 TNFRSF10CO14798 259 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 HSPB1P04792 205 aaKnown RBP11.36□□□□□ -0.59
TVP23A-201ENST00000299866 FOXL2P58012 376 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 LBHQ53QV2 105 aaPredicted RBP11.36□□□□□ -0.59
TVP23A-201ENST00000299866 DNLZQ5SXM8 178 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 C5orf24Q7Z6I8 188 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 SLC35E3Q7Z769 313 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 CMTM1Q8IZ96 169 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 THOC3Q96J01 351 aaKnown RBP11.36□□□□□ -0.59
TVP23A-201ENST00000299866 DDA1Q9BW61 102 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 SERINC1Q9NRX5 453 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 NECAP2Q9NVZ3 263 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 PITPNC1Q9UKF7 332 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 KIR2DS5A0A0G2JLQ3 304 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 A0A0G2JNG1 304 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 CLDN34H7C241 214 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 KIR2DS3K7RE56 304 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 KLF8O95600 359 aaPredicted RBP11.36□□□□□ -0.59
TVP23A-201ENST00000299866 SEMA4FO95754 770 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 AMBPP02760 352 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 EPHA1P21709 976 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 VAMP2P63027 116 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 KIR2DS5Q14953 304 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 CLEC12BQ2HXU8 276 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 ZNF506Q5JVG8 444 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 CRIP3Q6Q6R5 217 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 CLDND2Q8NHS1 167 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 MSI2Q96DH6 328 aaKnown RBP11.36□□□□□ -0.59
TVP23A-201ENST00000299866 WWTR1Q9GZV5 400 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 CALHM2Q9HA72 323 aa11.36□□□□□ -0.59
TVP23A-201ENST00000299866 A0A1W2PQD3 144 aa11.35□□□□□ -0.59
TVP23A-201ENST00000299866 COX5BP10606 129 aa11.35□□□□□ -0.59
TVP23A-201ENST00000299866 ALDH3B1P43353 468 aa11.35□□□□□ -0.59
TVP23A-201ENST00000299866 DYNLT3P51808 116 aa11.35□□□□□ -0.59
TVP23A-201ENST00000299866 NSDHLQ15738 373 aa11.35□□□□□ -0.59
TVP23A-201ENST00000299866 NECAP1Q8NC96 275 aa11.35□□□□□ -0.59
TVP23A-201ENST00000299866 OIT3Q8WWZ8 545 aa11.35□□□□□ -0.59
TVP23A-201ENST00000299866 TMEM234Q8WY98 164 aa11.35□□□□□ -0.59
TVP23A-201ENST00000299866 GAB2Q9UQC2 676 aa11.35□□□□□ -0.59
TVP23A-201ENST00000299866 CPAMD8Q8IZJ3 1885 aa11.35□□□□□ -0.59
TVP23A-201ENST00000299866 A0A1W2PQF6 199 aa11.35□□□□□ -0.59
TVP23A-201ENST00000299866 RRP8O43159 456 aaKnown RBP11.35□□□□□ -0.59
TVP23A-201ENST00000299866 NKX2-1P43699 371 aaPredicted RBP11.35□□□□□ -0.59
TVP23A-201ENST00000299866 PRSS12P56730 875 aa11.35□□□□□ -0.59
TVP23A-201ENST00000299866 ZP4Q12836 540 aa11.35□□□□□ -0.59
TVP23A-201ENST00000299866 PDCD1Q15116 288 aa11.35□□□□□ -0.59
TVP23A-201ENST00000299866 MPV17LQ2QL34 196 aa11.35□□□□□ -0.59
TVP23A-201ENST00000299866 OR4X1Q8NH49 305 aa11.35□□□□□ -0.59
TVP23A-201ENST00000299866 TP53RKQ96S44 253 aa11.35□□□□□ -0.59
TVP23A-201ENST00000299866 NKX2-4Q9H2Z4 354 aa11.35□□□□□ -0.59
TVP23A-201ENST00000299866 COL4A2P08572 1712 aa11.35□□□□□ -0.59
TVP23A-201ENST00000299866 WDR25Q64LD2 544 aaPredicted RBP11.34□□□□□ -0.59
TVP23A-201ENST00000299866 SHISA6Q6ZSJ9 500 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 DTX1Q86Y01 620 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 SLC22A18ASQ8N1D0 253 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 LYZL4Q96KX0 146 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 GPHA2Q96T91 129 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 GLRX2Q9NS18 164 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 SPRY1O43609 319 aaPredicted RBP11.34□□□□□ -0.59
TVP23A-201ENST00000299866 EFNA3P52797 238 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 CXorf66Q5JRM2 361 aaPredicted RBP11.34□□□□□ -0.59
TVP23A-201ENST00000299866 TMEM252Q8N6L7 170 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 SSC4DQ8WTU2 575 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 C8orf33Q9H7E9 229 aaPredicted RBP11.34□□□□□ -0.59
TVP23A-201ENST00000299866 LRFN1Q9P244 771 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 COPS7AQ9UBW8 275 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 PIGLQ9Y2B2 252 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 SPEGQ15772 3267 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 DVL1O14640 695 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 MMP7P09237 267 aaPredicted RBP11.34□□□□□ -0.59
TVP23A-201ENST00000299866 GALNSP34059 522 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 GFERP55789 205 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 RAB4BP61018 213 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 ARL6IP1Q15041 203 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 OR4D5Q8NGN0 318 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 SYT3Q9BQG1 590 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 ZNF160Q9HCG1 818 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 SZT2Q5T011 3432 aa11.34□□□□□ -0.59
TVP23A-201ENST00000299866 A0A1B0GWJ7 208 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 PROB1E7EW31 1015 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 PGA3P0DJD8 388 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 PNLIPP16233 465 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 AKT2P31751 481 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 RNF4P78317 190 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 COL10A1Q03692 680 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 TNFRSF9Q07011 255 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 FOXF1Q12946 379 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 SLC10A1Q14973 349 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 THEM4Q5T1C6 240 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 SLC25A24Q6NUK1 477 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 LANCL3Q6ZV70 420 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 UEVLDQ8IX04 471 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 TMEM183AQ8IXX5 376 aa11.33□□□□□ -0.6
TVP23A-201ENST00000299866 NOL4LQ96MY1 436 aaPredicted RBP11.33□□□□□ -0.6
TVP23A-201ENST00000299866 TM2D1Q9BX74 207 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 63 ms