RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 SPATA45Q537H7 98 aa13.25□□□□□ -0.29
SCN3B-201ENST00000299333 LIAT1Q6ZQX7 453 aa13.25□□□□□ -0.29
SCN3B-201ENST00000299333 PIK3IP1Q96FE7 263 aa13.25□□□□□ -0.29
SCN3B-201ENST00000299333 OR2T8A6NH00 312 aa13.25□□□□□ -0.29
SCN3B-201ENST00000299333 FUT7Q11130 342 aa13.25□□□□□ -0.29
SCN3B-201ENST00000299333 REC114Q7Z4M0 266 aa13.25□□□□□ -0.29
SCN3B-201ENST00000299333 D2HGDHQ8N465 521 aa13.25□□□□□ -0.29
SCN3B-201ENST00000299333 MS4A4AQ96JQ5 239 aa13.25□□□□□ -0.29
SCN3B-201ENST00000299333 DMRT1Q9Y5R6 373 aa13.25□□□□□ -0.29
SCN3B-201ENST00000299333 MDKP21741 143 aaPredicted RBP13.25□□□□□ -0.29
SCN3B-201ENST00000299333 RBM11P57052 281 aaKnown RBP13.25□□□□□ -0.29
SCN3B-201ENST00000299333 RELQ04864 619 aaPredicted RBP13.25□□□□□ -0.29
SCN3B-201ENST00000299333 MOB3BQ86TA1 216 aa13.25□□□□□ -0.29
SCN3B-201ENST00000299333 CXorf67Q86X51 503 aaPredicted RBP13.25□□□□□ -0.29
SCN3B-201ENST00000299333 ANGPTL4Q9BY76 406 aa13.25□□□□□ -0.29
SCN3B-201ENST00000299333 SP1P08047 785 aa13.25□□□□□ -0.29
SCN3B-201ENST00000299333 OR3A4PP47883 348 aa13.25□□□□□ -0.29
SCN3B-201ENST00000299333 PATE1Q8WXA2 126 aa13.25□□□□□ -0.29
SCN3B-201ENST00000299333 SPACA9Q96E40 222 aaPredicted RBP13.25□□□□□ -0.29
SCN3B-201ENST00000299333 TMEM56Q96MV1 263 aa13.25□□□□□ -0.29
SCN3B-201ENST00000299333 RNF186Q9NXI6 227 aa13.25□□□□□ -0.29
SCN3B-201ENST00000299333 MRPS2Q9Y399 296 aaKnown RBP13.25□□□□□ -0.29
SCN3B-201ENST00000299333 HCFC2Q9Y5Z7 792 aa13.25□□□□□ -0.29
SCN3B-201ENST00000299333 UBR2Q8IWV8 1755 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 A0A087WUJ7 227 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 SNURFLB1AK76 121 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 CORTO00230 105 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 SOD3P08294 240 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 IL24Q13007 206 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 PYCR3Q53H96 274 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 TMEM215Q68D42 235 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 ZNF343Q6P1L6 599 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 TRGV10A0A0A0MS01 117 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 FOXF1Q12946 379 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 C5orf17Q8NAS9 161 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 MS4A3Q96HJ5 214 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 SIGLEC7Q9Y286 467 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 H0Y8X5 98 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 CDC14BO60729 498 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 ACTL6AO96019 429 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 VMA21Q3ZAQ7 101 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 MORN1Q5T089 497 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 ABHD14AQ9BUJ0 271 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 RPS4Y1P22090 263 aaKnown RBP13.24□□□□□ -0.29
SCN3B-201ENST00000299333 RHBDD2Q6NTF9 364 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 RNF165Q6ZSG1 346 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 TGIF2LYQ8IUE0 185 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 MRGPRX4Q96LA9 322 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 TGIF2-C20orf24A0A0A6YYL0 155 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 ZNF716A6NP11 495 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 CLEC18BQ6UXF7 455 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 THAP10Q9P2Z0 257 aaPredicted RBP13.24□□□□□ -0.29
SCN3B-201ENST00000299333 VAX2Q9UIW0 290 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 PSG11Q9UQ72 335 aa13.24□□□□□ -0.29
SCN3B-201ENST00000299333 ABLIM3O94929 683 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 CRYAAP02489 173 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 P2RY1P47900 373 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 FHITP49789 147 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 HERVK_113P61574 105 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 UBE2L3P68036 154 aaKnown RBP13.23□□□□□ -0.29
SCN3B-201ENST00000299333 TCTN1Q2MV58 587 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 ALKBH3Q96Q83 286 aaPredicted RBP13.23□□□□□ -0.29
SCN3B-201ENST00000299333 CYR61O00622 381 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 TSPO2Q5TGU0 170 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 BAHD1Q8TBE0 780 aaPredicted RBP13.23□□□□□ -0.29
SCN3B-201ENST00000299333 C4orf45Q96LM5 186 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 SH2D2AQ9NP31 389 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 AURKAIP1Q9NWT8 199 aaPredicted RBP13.23□□□□□ -0.29
SCN3B-201ENST00000299333 OPN4Q9UHM6 478 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 RGPD2P0DJD1 1756 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 SH2D7A6NKC9 451 aaPredicted RBP13.23□□□□□ -0.29
SCN3B-201ENST00000299333 PDE6DO43924 150 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 AREGP15514 252 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 ORM2P19652 201 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 SPSB1Q96BD6 273 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 GAL3ST2Q9H3Q3 398 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 OCIAD1Q9NX40 245 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 TECRQ9NZ01 308 aaKnown RBP13.23□□□□□ -0.29
SCN3B-201ENST00000299333 MBPP02686 304 aaPredicted RBP13.23□□□□□ -0.29
SCN3B-201ENST00000299333 TMEM65Q6PI78 240 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 FAM219AQ8IW50 185 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 HSD17B10Q99714 261 aaKnown RBP13.23□□□□□ -0.29
SCN3B-201ENST00000299333 ZNF430Q9H8G1 570 aaPredicted RBP13.23□□□□□ -0.29
SCN3B-201ENST00000299333 CNTD2Q9H8S5 307 aa13.23□□□□□ -0.29
SCN3B-201ENST00000299333 GNG7O60262 68 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 EIF3GO75821 320 aaKnown RBP eCLIP13.22□□□□□ -0.29
SCN3B-201ENST00000299333 NGFP01138 241 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 APCSP02743 223 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 BMI1P35226 326 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 NPBWR2P48146 333 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 NMUP48645 174 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 ZNF260Q3ZCT1 412 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 RFESDQ8TAC1 157 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 H7C2G1 150 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 ST6GAL1P15907 406 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 WNT3P56703 355 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 FMODQ06828 376 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 ZNF683Q8IZ20 524 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 PIPOXQ9P0Z9 390 aa13.22□□□□□ -0.29
SCN3B-201ENST00000299333 FGF2P09038 288 aa13.22□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms