RNA–Protein interactions for RNA: ENST00000296930.9

NPM1-201, Transcript of nucleophosmin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPM1, Length 1,758 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1-201ENST00000296930 BMXP51813 675 aa13.58□□□□□ -0.23
NPM1-201ENST00000296930 DMRTC1Q5HYR2 192 aa13.58□□□□□ -0.23
NPM1-201ENST00000296930 IDNKQ5T6J7 187 aa13.58□□□□□ -0.23
NPM1-201ENST00000296930 CD276Q5ZPR3 534 aa13.58□□□□□ -0.23
NPM1-201ENST00000296930 SFRP4Q6FHJ7 346 aaPredicted RBP13.58□□□□□ -0.23
NPM1-201ENST00000296930 KRT74Q7RTS7 529 aa13.58□□□□□ -0.23
NPM1-201ENST00000296930 NKAIN3Q8N8D7 197 aa13.58□□□□□ -0.23
NPM1-201ENST00000296930 BOLLQ8N9W6 283 aaKnown RBP13.58□□□□□ -0.23
NPM1-201ENST00000296930 SGMS2Q8NHU3 365 aa13.58□□□□□ -0.23
NPM1-201ENST00000296930 ITFG2Q969R8 447 aa13.58□□□□□ -0.23
NPM1-201ENST00000296930 SLC25A28Q96A46 364 aa13.58□□□□□ -0.23
NPM1-201ENST00000296930 C1orf147Q96MC9 270 aaPredicted RBP13.58□□□□□ -0.23
NPM1-201ENST00000296930 TSC22D3Q99576 134 aa13.58□□□□□ -0.23
NPM1-201ENST00000296930 NKX3-1Q99801 234 aaPredicted RBP13.58□□□□□ -0.23
NPM1-201ENST00000296930 C6orf62Q9GZU0 229 aaPredicted RBP13.58□□□□□ -0.23
NPM1-201ENST00000296930 PPP1R3EQ9H7J1 279 aa13.58□□□□□ -0.23
NPM1-201ENST00000296930 SMURF1Q9HCE7 757 aa13.58□□□□□ -0.23
NPM1-201ENST00000296930 C1orf123Q9NWV4 160 aa13.58□□□□□ -0.23
NPM1-201ENST00000296930 ZNF816-ZNF321PA0A0X1KG74 233 aa13.58□□□□□ -0.24
NPM1-201ENST00000296930 MEGF11A6BM72 1044 aa13.58□□□□□ -0.24
NPM1-201ENST00000296930 A6NLC8 198 aa13.58□□□□□ -0.24
NPM1-201ENST00000296930 C3orf80F5H4A9 247 aa13.58□□□□□ -0.24
NPM1-201ENST00000296930 CLDN34H7C241 214 aa13.58□□□□□ -0.24
NPM1-201ENST00000296930 ALX3O95076 343 aa13.58□□□□□ -0.24
NPM1-201ENST00000296930 GRPP07492 148 aa13.58□□□□□ -0.24
NPM1-201ENST00000296930 PSMD7P51665 324 aa13.58□□□□□ -0.24
NPM1-201ENST00000296930 OR52N4Q8NGI2 321 aa13.58□□□□□ -0.24
NPM1-201ENST00000296930 OR8S1Q8NH09 359 aa13.58□□□□□ -0.24
NPM1-201ENST00000296930 AP3S1Q92572 193 aa13.58□□□□□ -0.24
NPM1-201ENST00000296930 TECTBQ96PL2 329 aa13.58□□□□□ -0.24
NPM1-201ENST00000296930 GPR173Q9NS66 373 aa13.58□□□□□ -0.24
NPM1-201ENST00000296930 RHBDD3Q9Y3P4 386 aa13.58□□□□□ -0.24
NPM1-201ENST00000296930 OOEPA6NGQ2 149 aa13.57□□□□□ -0.24
NPM1-201ENST00000296930 CTDSP2O14595 271 aa13.57□□□□□ -0.24
NPM1-201ENST00000296930 ADAM20O43506 726 aa13.57□□□□□ -0.24
NPM1-201ENST00000296930 LIPFP07098 398 aa13.57□□□□□ -0.24
NPM1-201ENST00000296930 RNASE1P07998 156 aaKnown RBP13.57□□□□□ -0.24
NPM1-201ENST00000296930 FGF12P61328 243 aa13.57□□□□□ -0.24
NPM1-201ENST00000296930 HOXA4Q00056 320 aaPredicted RBP13.57□□□□□ -0.24
NPM1-201ENST00000296930 CLVS2Q5SYC1 327 aa13.57□□□□□ -0.24
NPM1-201ENST00000296930 HES5Q5TA89 166 aa13.57□□□□□ -0.24
NPM1-201ENST00000296930 DDI2Q5TDH0 399 aa13.57□□□□□ -0.24
NPM1-201ENST00000296930 CSNK2A3Q8NEV1 391 aa13.57□□□□□ -0.24
NPM1-201ENST00000296930 OR6Q1Q8NGQ2 317 aa13.57□□□□□ -0.24
NPM1-201ENST00000296930 KCTD12Q96CX2 325 aaKnown RBP13.57□□□□□ -0.24
NPM1-201ENST00000296930 CTSZQ9UBR2 303 aa13.57□□□□□ -0.24
NPM1-201ENST00000296930 A0A0B4J203 849 aa13.56□□□□□ -0.24
NPM1-201ENST00000296930 hCG_1807616A0A1W2PRN6 198 aa13.56□□□□□ -0.24
NPM1-201ENST00000296930 C22orf46C9J442 243 aa13.56□□□□□ -0.24
NPM1-201ENST00000296930 NRASP01111 189 aa13.56□□□□□ -0.24
NPM1-201ENST00000296930 BPIFB3P59826 476 aa13.56□□□□□ -0.24
NPM1-201ENST00000296930 GPR157Q5UAW9 335 aa13.56□□□□□ -0.24
NPM1-201ENST00000296930 GLT8D1Q68CQ7 371 aa13.56□□□□□ -0.24
NPM1-201ENST00000296930 CRIP3Q6Q6R5 217 aa13.56□□□□□ -0.24
NPM1-201ENST00000296930 RNF144BQ7Z419 303 aa13.56□□□□□ -0.24
NPM1-201ENST00000296930 SLC17A2O00624 439 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 TNFRSF13BO14836 293 aaPredicted RBP13.55□□□□□ -0.24
NPM1-201ENST00000296930 PAHP00439 452 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 CST4P01036 141 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 ALDOBP05062 364 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 AZGP1P25311 298 aaKnown RBP13.55□□□□□ -0.24
NPM1-201ENST00000296930 CLDN12P56749 244 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 SLC9A3R2Q15599 337 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 LINC00299Q6ZSB3 139 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 ZNF826PQ6ZT77 177 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 GCSAMQ8N6F7 178 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 NPRL2Q8WTW4 380 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 ACOT12Q8WYK0 555 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 PIGCQ92535 297 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 SPACA5Q96QH8 159 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 ZNF747Q9BV97 191 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 PAPOLGQ9BWT3 736 aaKnown RBP13.55□□□□□ -0.24
NPM1-201ENST00000296930 PLGRKTQ9HBL7 147 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 TMEM127O75204 238 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 LHBP01229 141 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 HCKP08631 526 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 SNRPBP14678 240 aaKnown RBP13.55□□□□□ -0.24
NPM1-201ENST00000296930 EGR1P18146 543 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 C11orf91Q3C1V1 193 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 C1orf100Q5SVJ3 147 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 LAX1Q8IWV1 398 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 FTMTQ8N4E7 242 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 JAGN1Q8N5M9 183 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 PNLDC1Q8NA58 520 aaKnown RBP13.55□□□□□ -0.24
NPM1-201ENST00000296930 SPSB1Q96BD6 273 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 MIXL1Q9H2W2 232 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 LIN7BQ9HAP6 207 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 ABRACLQ9P1F3 81 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 COMMD3Q9UBI1 195 aa13.55□□□□□ -0.24
NPM1-201ENST00000296930 SOX21Q9Y651 276 aaPredicted RBP13.55□□□□□ -0.24
NPM1-201ENST00000296930 ZNF850A8MQ14 1090 aa13.54□□□□□ -0.24
NPM1-201ENST00000296930 SPRY1O43609 319 aaPredicted RBP13.54□□□□□ -0.24
NPM1-201ENST00000296930 GYPAP02724 150 aa13.54□□□□□ -0.24
NPM1-201ENST00000296930 ZNF93P35789 620 aaPredicted RBP13.54□□□□□ -0.24
NPM1-201ENST00000296930 PRDX4Q13162 271 aa13.54□□□□□ -0.24
NPM1-201ENST00000296930 DYNC1I2Q13409 638 aaKnown RBP13.54□□□□□ -0.24
NPM1-201ENST00000296930 CNN3Q15417 329 aaKnown RBP13.54□□□□□ -0.24
NPM1-201ENST00000296930 TEX36Q5VZQ5 186 aa13.54□□□□□ -0.24
NPM1-201ENST00000296930 BRD3OSQ6XYD6 125 aa13.54□□□□□ -0.24
NPM1-201ENST00000296930 FAM90A1Q86YD7 464 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 46.5 ms