RNA–Protein interactions for RNA: ENST00000296449.9

CCDC36-201, Transcript of coiled-coil domain containing 36, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CCDC36, Length 2,613 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC36-201ENST00000296449 M0R135 149 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 EN2P19622 333 aaPredicted RBP8.85□□□□□ -0.99
CCDC36-201ENST00000296449 GUCA1AP43080 201 aaPredicted RBP8.85□□□□□ -0.99
CCDC36-201ENST00000296449 HNRNPKP61978 463 aaKnown RBP eCLIP8.85□□□□□ -0.99
CCDC36-201ENST00000296449 RSU1Q15404 277 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 SNAI3Q3KNW1 292 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 ZNF574Q6ZN55 896 aaPredicted RBP8.85□□□□□ -0.99
CCDC36-201ENST00000296449 OR4D5Q8NGN0 318 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 NABP1Q96AH0 204 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 ZNF799Q96GE5 643 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 WDR77Q9BQA1 342 aaPredicted RBP8.85□□□□□ -0.99
CCDC36-201ENST00000296449 ABHD14AQ9BUJ0 271 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 TREM2Q9NZC2 230 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 TCFL5Q9UL49 500 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 MMP24Q9Y5R2 645 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 IGLV3-12A0A075B6K2 115 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 IGKV1-27A0A075B6S5 117 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 TMEM238LA0A1B0GVL6 79 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 FAM221AA4D161 298 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 OR2J2O76002 312 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 RD3LP0DJH9 198 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 MYF5P13349 255 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 AFF3P51826 1226 aaKnown RBP8.85□□□□□ -0.99
CCDC36-201ENST00000296449 UCP3P55916 312 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 HIST1H3AP68431 136 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 PYY3Q5JQD4 70 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 OR2B11Q5JQS5 317 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 C10orf128Q5T292 105 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 HIST2H3PS2Q5TEC6 136 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 SPSB3Q6PJ21 355 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 BRICD5Q6PL45 260 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 FOXL2NBQ6ZUU3 175 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 SGK3Q96BR1 496 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 SYT3Q9BQG1 590 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 C11orf1Q9H5F2 150 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 TMED3Q9Y3Q3 217 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 SHANK1Q9Y566 2161 aa8.85□□□□□ -0.99
CCDC36-201ENST00000296449 RBFOX3A6NFN3 312 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 ZNF727A8MUV8 499 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 CDRT15L2A8MXV6 281 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 H3BQ15 152 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 PHF1O43189 567 aaPredicted RBP8.84□□□□□ -0.99
CCDC36-201ENST00000296449 ITGA3P26006 1051 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 NOVA1P51513 510 aaKnown RBP8.84□□□□□ -0.99
CCDC36-201ENST00000296449 ZNF266Q14584 549 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 GNMTQ14749 295 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 SHHQ15465 462 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 RHBDD2Q6NTF9 364 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 SLC22A25Q6T423 547 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 FBXL14Q8N1E6 418 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 SLC35G3Q8N808 338 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 RAB39BQ96DA2 213 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 OPA3Q9H6K4 179 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 BCO1Q9HAY6 547 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 MYOTQ9UBF9 498 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 FAM230AA0A1W2PPH8 454 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 FAM24AA6NFZ4 105 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 NDUFS6O75380 124 aaKnown RBP8.84□□□□□ -0.99
CCDC36-201ENST00000296449 FKBP2P26885 142 aaKnown RBP8.84□□□□□ -0.99
CCDC36-201ENST00000296449 ATP6V0CP27449 155 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 HAGHQ16775 308 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 SP5Q6BEB4 398 aaPredicted RBP8.84□□□□□ -0.99
CCDC36-201ENST00000296449 OR2C3Q8N628 320 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 OR10AD1Q8NGE0 317 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 OR5L2Q8NGL0 311 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 OR2G3Q8NGZ4 309 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 OR2AE1Q8NHA4 323 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 SLAMF9Q96A28 289 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 SPSB1Q96BD6 273 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 MOB3AQ96BX8 217 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 TP53RKQ96S44 253 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 PLEK2Q9NYT0 353 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 BRWD1Q9NSI6 2320 aa8.84□□□□□ -0.99
CCDC36-201ENST00000296449 IGSF23A1L1A6 192 aa8.84□□□□□ -1
CCDC36-201ENST00000296449 HSD17B6O14756 317 aa8.84□□□□□ -1
CCDC36-201ENST00000296449 GEMIN2O14893 280 aaKnown RBP8.84□□□□□ -1
CCDC36-201ENST00000296449 RND3P61587 244 aa8.84□□□□□ -1
CCDC36-201ENST00000296449 PIGYQ3MUY2 71 aa8.84□□□□□ -1
CCDC36-201ENST00000296449 NKAIN1Q4KMZ8 207 aa8.84□□□□□ -1
CCDC36-201ENST00000296449 C9orf152Q5JTZ5 239 aa8.84□□□□□ -1
CCDC36-201ENST00000296449 ZNF343Q6P1L6 599 aa8.84□□□□□ -1
CCDC36-201ENST00000296449 MEX3BQ6ZN04 569 aaKnown RBP8.84□□□□□ -1
CCDC36-201ENST00000296449 ZFP62Q8NB50 900 aaPredicted RBP8.84□□□□□ -1
CCDC36-201ENST00000296449 TSTD1Q8NFU3 115 aa8.84□□□□□ -1
CCDC36-201ENST00000296449 TMEM54Q969K7 222 aa8.84□□□□□ -1
CCDC36-201ENST00000296449 ZNF385AQ96PM9 386 aaKnown RBP8.84□□□□□ -1
CCDC36-201ENST00000296449 PARPBPQ9NWS1 579 aa8.84□□□□□ -1
CCDC36-201ENST00000296449 DOK5Q9P104 306 aa8.84□□□□□ -1
CCDC36-201ENST00000296449 KIAA1456Q9P272 454 aa8.84□□□□□ -1
CCDC36-201ENST00000296449 NKX2-6A6NCS4 301 aa8.83□□□□□ -1
CCDC36-201ENST00000296449 CXorf65A6NEN9 183 aa8.83□□□□□ -1
CCDC36-201ENST00000296449 ZNF724A8MTY0 619 aa8.83□□□□□ -1
CCDC36-201ENST00000296449 H0YL77 283 aa8.83□□□□□ -1
CCDC36-201ENST00000296449 TERTO14746 1132 aaKnown RBP8.83□□□□□ -1
CCDC36-201ENST00000296449 PITX3O75364 302 aa8.83□□□□□ -1
CCDC36-201ENST00000296449 PIAS2O75928 621 aa8.83□□□□□ -1
CCDC36-201ENST00000296449 CDS2O95674 445 aa8.83□□□□□ -1
CCDC36-201ENST00000296449 CD63P08962 238 aa8.83□□□□□ -1
CCDC36-201ENST00000296449 SRP19P09132 144 aaKnown RBP8.83□□□□□ -1
CCDC36-201ENST00000296449 CXCL1P09341 107 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms