RNA–Protein interactions for RNA: ENST00000293748.9

SYNGAP1-201, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 5

Gene SYNGAP1, Length 4,556 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-201ENST00000293748 CDONQ4KMG0 1287 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 OR2B11Q5JQS5 317 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 PWWP2BQ6NUJ5 590 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 BATF2Q8N1L9 274 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 ADGRG7Q96K78 797 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 SEC11CQ9BY50 192 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 NMES1Q9C002 83 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 KCNE3Q9Y6H6 103 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 M0R143 59 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 OR5G3P0C626 314 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 ERGP11308 486 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 OR2A2Q6IF42 318 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 FBXL17Q9UF56 701 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 IGHV3-20A0A0C4DH32 117 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 TMEM272A0A1B0GTI8 110 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 SIRPB1O00241 398 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 INHBBP09529 407 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 ERVFC1-1P60608 527 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 INSL4Q14641 139 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 INPP5JQ15735 1006 aaPredicted RBP10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 RTL8BQ17RB0 113 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 ZNF658BQ4V348 819 aaPredicted RBP10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 USB1Q9BQ65 265 aaKnown RBP10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 COMMD5Q9GZQ3 224 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 LPAR3Q9UBY5 353 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 OPN4Q9UHM6 478 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 CEP250Q9BV73 2442 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 PLA2G10O15496 165 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 FAHP16930 419 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 USF1P22415 310 aaPredicted RBP10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 CD200P41217 278 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 SELENOPP49908 381 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 HLA-DRB3P79483 266 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 LBHQ53QV2 105 aaPredicted RBP10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 PRO1933Q9H354 126 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 PRDM7Q9NQW5 492 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 UNC13CQ8NB66 2214 aa10.51□□□□□ -0.73
SYNGAP1-201ENST00000293748 ZNF98A6NK75 572 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 SLC31A2O15432 143 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 GPANK1O95872 356 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 GALR1P47211 349 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 SLC37A1P57057 533 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 RPS23P62266 143 aaKnown RBP10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 DMKNQ6E0U4 476 aaPredicted RBP10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 C8orf82Q6P1X6 216 aaPredicted RBP10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 C17orf47Q8NEP4 570 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 H1FXQ92522 213 aaKnown RBP10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 WDR34Q96EX3 536 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 NOL4LQ96MY1 436 aaPredicted RBP10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 SEMA5BQ9P283 1151 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 RFC3P40938 356 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 CD81P60033 236 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 TSEN54Q7Z6J9 526 aaKnown RBP10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 OR2C3Q8N628 320 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 NDFIP1Q9BT67 221 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 MIXL1Q9H2W2 232 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 ZNF355PQ9NSJ1 428 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 DKK4Q9UBT3 224 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 MAP1LC3B2A6NCE7 125 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 CXCL3P19876 107 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 OR10G3Q8NGC4 313 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 EXTL1Q92935 676 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 MAP1LC3BQ9GZQ8 125 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 RAXQ9Y2V3 346 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 A0A087X0M5 115 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 UBE2L5PA0A1B0GUS4 154 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 A0A1B0GX30 115 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 CNIH1O95406 144 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 IGHV3-9P01782 118 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 CLEC3BP05452 202 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 PMCHP20382 165 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 HAAOP46952 286 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 RBPJQ06330 500 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 SURF2Q15527 256 aaPredicted RBP10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 SP6Q3SY56 376 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 OR5AS1Q8N127 324 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 FBXL14Q8N1E6 418 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 ZNF596Q8TC21 504 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 EGLN1Q9GZT9 426 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 ZNF391Q9UJN7 358 aa10.5□□□□□ -0.73
SYNGAP1-201ENST00000293748 NUP214P35658 2090 aaPredicted RBP10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 ZBTB25P24278 435 aa10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 AWAT1Q58HT5 328 aa10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 SLC25A30Q5SVS4 291 aa10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 OR5C1Q8NGR4 320 aa10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 CT55Q8WUE5 264 aa10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 MKRN2OSH3BPM6 223 aa10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 CRHP06850 196 aa10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 PMS2P11Q13670 270 aa10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 IRF3Q14653 427 aa10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 NOXO1Q8NFA2 376 aa10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 ARHGAP5-AS1Q96IT6 56 aa10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 C20orf141Q9NUB4 165 aa10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 ZNF107Q9UII5 783 aaPredicted RBP10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 DUXBA0A1W2PPF3 345 aa10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 ETFDHQ16134 617 aa10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 LGALSLQ3ZCW2 172 aaPredicted RBP10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 TMEM104Q8NE00 496 aa10.49□□□□□ -0.73
SYNGAP1-201ENST00000293748 NAA60Q9H7X0 242 aa10.49□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms