RNA–Protein interactions for RNA: ENST00000290460.7

SCUBE1-201, Transcript of signal peptide, CUB domain and EGF like domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene SCUBE1, Length 2,258 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1-201ENST00000290460 CDCP2Q5VXM1 449 aa17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 SLC25A26Q70HW3 274 aa17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 ZNF611Q8N823 705 aa17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 OR5L1Q8NGL2 311 aa17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 OR11L1Q8NGX0 322 aa17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 NAA60Q9H7X0 242 aa17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 MMP26Q9NRE1 261 aa17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 SLC7A10Q9NS82 523 aa17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 FBXL17Q9UF56 701 aa17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 ZNF391Q9UJN7 358 aa17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 MRPL33O75394 65 aaKnown RBP17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 OR7C1O76099 320 aaPredicted RBP17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 LPAR6P43657 344 aa17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 FOXG1P55316 489 aaPredicted RBP17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 TMEM187Q14656 261 aa17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 LYZL2Q7Z4W2 148 aa17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 PRRX2Q99811 253 aa17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 TLNRD1Q9H1K6 362 aa17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 TREM1Q9NP99 234 aa17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 SLC2A9Q9NRM0 540 aa17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 CRIM1Q9NZV1 1036 aa17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 ZNF629Q9UEG4 869 aaPredicted RBP17.23■□□□□ 0.35
SCUBE1-201ENST00000290460 F8W036 122 aa17.22■□□□□ 0.35
SCUBE1-201ENST00000290460 FARS2O95363 451 aaKnown RBP17.22■□□□□ 0.35
SCUBE1-201ENST00000290460 RBM11P57052 281 aaKnown RBP17.22■□□□□ 0.35
SCUBE1-201ENST00000290460 BLOC1S1P78537 153 aa17.22■□□□□ 0.35
SCUBE1-201ENST00000290460 C5orf24Q7Z6I8 188 aa17.22■□□□□ 0.35
SCUBE1-201ENST00000290460 PLA2G2EQ9NZK7 142 aa17.22■□□□□ 0.35
SCUBE1-201ENST00000290460 PDCD6O75340 191 aa17.22■□□□□ 0.35
SCUBE1-201ENST00000290460 MED6O75586 246 aa17.22■□□□□ 0.35
SCUBE1-201ENST00000290460 NEURL1O76050 574 aa17.22■□□□□ 0.35
SCUBE1-201ENST00000290460 DIRAS3O95661 229 aa17.22■□□□□ 0.35
SCUBE1-201ENST00000290460 TMEM33P57088 247 aa17.22■□□□□ 0.35
SCUBE1-201ENST00000290460 ARF1P84077 181 aaKnown RBP17.22■□□□□ 0.35
SCUBE1-201ENST00000290460 ZXDAP98168 799 aa17.22■□□□□ 0.35
SCUBE1-201ENST00000290460 LDLRAD3Q86YD5 345 aa17.22■□□□□ 0.35
SCUBE1-201ENST00000290460 C1QTNF5Q9BXJ0 243 aa17.22■□□□□ 0.35
SCUBE1-201ENST00000290460 ZNF442Q9H7R0 627 aa17.22■□□□□ 0.35
SCUBE1-201ENST00000290460 IL36GQ9NZH8 169 aa17.22■□□□□ 0.35
SCUBE1-201ENST00000290460 KCNIP3Q9Y2W7 256 aa17.22■□□□□ 0.35
SCUBE1-201ENST00000290460 AMDHD2Q9Y303 409 aa17.22■□□□□ 0.35
SCUBE1-201ENST00000290460 XRCC2O43543 280 aa17.21■□□□□ 0.35
SCUBE1-201ENST00000290460 HLA-HP01893 362 aa17.21■□□□□ 0.35
SCUBE1-201ENST00000290460 MBPP02686 304 aaPredicted RBP17.21■□□□□ 0.35
SCUBE1-201ENST00000290460 JMJD7P0C870 316 aa17.21■□□□□ 0.35
SCUBE1-201ENST00000290460 CTRB1P17538 263 aa17.21■□□□□ 0.35
SCUBE1-201ENST00000290460 ID4P47928 161 aa17.21■□□□□ 0.35
SCUBE1-201ENST00000290460 NOVA1P51513 510 aaKnown RBP17.21■□□□□ 0.35
SCUBE1-201ENST00000290460 MALLQ13021 153 aa17.21■□□□□ 0.35
SCUBE1-201ENST00000290460 SMCO1Q147U7 214 aa17.21■□□□□ 0.35
SCUBE1-201ENST00000290460 CTRB2Q6GPI1 263 aa17.21■□□□□ 0.35
SCUBE1-201ENST00000290460 SVBPQ8N300 66 aa17.21■□□□□ 0.35
SCUBE1-201ENST00000290460 CLRN3Q8NCR9 226 aa17.21■□□□□ 0.35
SCUBE1-201ENST00000290460 SMIM8Q96KF7 97 aa17.21■□□□□ 0.35
SCUBE1-201ENST00000290460 CALHM2Q9HA72 323 aa17.21■□□□□ 0.35
SCUBE1-201ENST00000290460 ZNF286AQ9HBT8 521 aa17.21■□□□□ 0.35
SCUBE1-201ENST00000290460 FOXJ2Q9P0K8 574 aa17.21■□□□□ 0.35
SCUBE1-201ENST00000290460 BOKQ9UMX3 212 aaPredicted RBP17.21■□□□□ 0.35
SCUBE1-201ENST00000290460 MRPS18CQ9Y3D5 142 aaKnown RBP17.21■□□□□ 0.35
SCUBE1-201ENST00000290460 PRRC2CQ9Y520 2896 aaKnown RBP17.21■□□□□ 0.35
SCUBE1-201ENST00000290460 ZNF503-AS2A6NEH8 195 aa17.21■□□□□ 0.34
SCUBE1-201ENST00000290460 FAM166BA8MTA8 275 aa17.21■□□□□ 0.34
SCUBE1-201ENST00000290460 C9orf172C9J069 976 aa17.21■□□□□ 0.34
SCUBE1-201ENST00000290460 TAAR5O14804 337 aa17.21■□□□□ 0.34
SCUBE1-201ENST00000290460 PJVKQ0ZLH3 352 aa17.21■□□□□ 0.34
SCUBE1-201ENST00000290460 TUSC5Q8IXB3 177 aa17.21■□□□□ 0.34
SCUBE1-201ENST00000290460 OR2M7Q8NG81 312 aa17.21■□□□□ 0.34
SCUBE1-201ENST00000290460 OR56B2PQ8NGI1 322 aa17.21■□□□□ 0.34
SCUBE1-201ENST00000290460 ERGIC1Q969X5 290 aa17.21■□□□□ 0.34
SCUBE1-201ENST00000290460 BSCL2Q96G97 398 aaPredicted RBP17.21■□□□□ 0.34
SCUBE1-201ENST00000290460 PAPOLGQ9BWT3 736 aaKnown RBP17.21■□□□□ 0.34
SCUBE1-201ENST00000290460 ZNF703Q9H7S9 590 aaPredicted RBP17.21■□□□□ 0.34
SCUBE1-201ENST00000290460 PARPBPQ9NWS1 579 aa17.21■□□□□ 0.34
SCUBE1-201ENST00000290460 LHX2P50458 406 aa17.2■□□□□ 0.34
SCUBE1-201ENST00000290460 IGSF11Q5DX21 431 aa17.2■□□□□ 0.34
SCUBE1-201ENST00000290460 TMEM268Q5VZI3 342 aa17.2■□□□□ 0.34
SCUBE1-201ENST00000290460 OR5T2Q8NGG2 359 aa17.2■□□□□ 0.34
SCUBE1-201ENST00000290460 SPSB4Q96A44 273 aa17.2■□□□□ 0.34
SCUBE1-201ENST00000290460 HS3ST6Q96QI5 342 aa17.2■□□□□ 0.34
SCUBE1-201ENST00000290460 RHOFQ9HBH0 211 aa17.2■□□□□ 0.34
SCUBE1-201ENST00000290460 AGPAT2O15120 278 aa17.19■□□□□ 0.34
SCUBE1-201ENST00000290460 MUC1P15941 1255 aaPredicted RBP17.19■□□□□ 0.34
SCUBE1-201ENST00000290460 FAM122CQ6P4D5 195 aa17.19■□□□□ 0.34
SCUBE1-201ENST00000290460 CBLN2Q8IUK8 224 aa17.19■□□□□ 0.34
SCUBE1-201ENST00000290460 TMEM45BQ96B21 275 aa17.19■□□□□ 0.34
SCUBE1-201ENST00000290460 GALNT14Q96FL9 552 aa17.19■□□□□ 0.34
SCUBE1-201ENST00000290460 TAAR9Q96RI9 348 aa17.19■□□□□ 0.34
SCUBE1-201ENST00000290460 PRDM14Q9GZV8 571 aa17.19■□□□□ 0.34
SCUBE1-201ENST00000290460 FGF23Q9GZV9 251 aaPredicted RBP17.19■□□□□ 0.34
SCUBE1-201ENST00000290460 PARP12Q9H0J9 701 aaKnown RBP17.19■□□□□ 0.34
SCUBE1-201ENST00000290460 UQCC1Q9NVA1 299 aa17.19■□□□□ 0.34
SCUBE1-201ENST00000290460 LHX6Q9UPM6 363 aa17.19■□□□□ 0.34
SCUBE1-201ENST00000290460 PRELID1Q9Y255 219 aa17.19■□□□□ 0.34
SCUBE1-201ENST00000290460 ESPL1Q14674 2120 aa17.19■□□□□ 0.34
SCUBE1-201ENST00000290460 A0A1W2PNU3 283 aaPredicted RBP17.19■□□□□ 0.34
SCUBE1-201ENST00000290460 CST4P01036 141 aa17.19■□□□□ 0.34
SCUBE1-201ENST00000290460 SPINK2P20155 84 aa17.19■□□□□ 0.34
SCUBE1-201ENST00000290460 AADACP22760 399 aa17.19■□□□□ 0.34
SCUBE1-201ENST00000290460 MAGEA5P43359 124 aa17.19■□□□□ 0.34
SCUBE1-201ENST00000290460 IL34Q6ZMJ4 242 aa17.19■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 55.4 ms