RNA–Protein interactions for RNA: ENST00000286835.11

SCAF4-201, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SCAF4, Length 4,193 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-201ENST00000286835 ACER2Q5QJU3 275 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 LINC00696Q6ZRV3 163 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 CMTM1Q8IZ96 169 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 NECAP1Q8NC96 275 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 SMIM8Q96KF7 97 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 GPR137BO60478 399 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 DEDDO75618 318 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 SLC34A2O95436 690 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 ZNF133P52736 654 aaPredicted RBP11.74□□□□□ -0.53
SCAF4-201ENST00000286835 ZNF266Q14584 549 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 PIGYQ3MUY2 71 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 OXGR1Q96P68 337 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 TMPRSS5Q9H3S3 457 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 CACFD1Q9UGQ2 172 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 KCNS2Q9ULS6 477 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 RFNGQ9Y644 331 aa11.74□□□□□ -0.53
SCAF4-201ENST00000286835 C5orf63A6NC05 138 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 YKT6O15498 198 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 IFI6P09912 130 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 FASLGP48023 281 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 ZNF343Q6P1L6 599 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 OR52M1Q8NGK5 317 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 PCED1AQ9H1Q7 454 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 NAA60Q9H7X0 242 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 GEMIN2O14893 280 aaKnown RBP11.73□□□□□ -0.53
SCAF4-201ENST00000286835 CLN5O75503 358 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 DHRS3O75911 302 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 FABP4P15090 132 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 ACKR3P25106 362 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 RBP2P50120 134 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 WDFY1Q8IWB7 410 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 OR5C1Q8NGR4 320 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 MVB12AQ96EY5 273 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 ALKBH3Q96Q83 286 aaPredicted RBP11.73□□□□□ -0.53
SCAF4-201ENST00000286835 DOCK7Q96N67 2140 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 TK1P04183 234 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 RUNX1Q01196 453 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 CNN3Q15417 329 aaKnown RBP11.73□□□□□ -0.53
SCAF4-201ENST00000286835 UBE2V2Q15819 145 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 AADACL3Q5VUY0 350 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 OR2T2Q6IF00 324 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 ZNF429Q86V71 674 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 HIST1H2AAQ96QV6 131 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 OCSTAMPQ9BR26 566 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 SLC2A9Q9NRM0 540 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 TMEM100Q9NV29 134 aa11.73□□□□□ -0.53
SCAF4-201ENST00000286835 LOC390937A0A1W2PQ73 354 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 B4GALT1P15291 398 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 RTL6Q6ICC9 239 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 MRGPRX4Q96LA9 322 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 SPIN2AQ99865 258 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 SPIN2BQ9BPZ2 258 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 NPIPB7O75200 414 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 SERPINE2P07093 398 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 CTSDP07339 412 aaPredicted RBP11.72□□□□□ -0.53
SCAF4-201ENST00000286835 SNCAP37840 140 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 IDH3GP51553 393 aaPredicted RBP11.72□□□□□ -0.53
SCAF4-201ENST00000286835 DHRS13Q6UX07 377 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 BEND4Q6ZU67 534 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 THNSL2Q86YJ6 484 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 LILRB2Q8N423 598 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 RHOVQ96L33 236 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 A0A087WZY1 265 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 IGHV3-64DA0A0J9YX35 117 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 FTCDNL1E5RQL4 147 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 H0YL77 283 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 ATXN7O15265 892 aaPredicted RBP11.72□□□□□ -0.53
SCAF4-201ENST00000286835 SCAF4O95104 1147 aaKnown RBP11.72□□□□□ -0.53
SCAF4-201ENST00000286835 SPEM2Q0P670 501 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 ZNF383Q8NA42 475 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 UBALD1Q8TB05 177 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 UCN2Q96RP3 112 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 SLC25A31Q9H0C2 315 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 WSB1Q9Y6I7 421 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 ICE1Q9Y2F5 2266 aa11.72□□□□□ -0.53
SCAF4-201ENST00000286835 IGKV1-9A0A0C4DH69 117 aa11.71□□□□□ -0.53
SCAF4-201ENST00000286835 SLC25A26Q70HW3 274 aa11.71□□□□□ -0.53
SCAF4-201ENST00000286835 OR2C3Q8N628 320 aa11.71□□□□□ -0.53
SCAF4-201ENST00000286835 CRLF2Q9HC73 371 aa11.71□□□□□ -0.53
SCAF4-201ENST00000286835 OSGIN2Q9Y236 505 aa11.71□□□□□ -0.53
SCAF4-201ENST00000286835 STRAPQ9Y3F4 350 aaKnown RBP11.71□□□□□ -0.53
SCAF4-201ENST00000286835 ECI1P42126 302 aa11.71□□□□□ -0.53
SCAF4-201ENST00000286835 ELLP55199 621 aaPredicted RBP11.71□□□□□ -0.53
SCAF4-201ENST00000286835 SHBQ15464 509 aa11.71□□□□□ -0.53
SCAF4-201ENST00000286835 TESK1Q15569 626 aa11.71□□□□□ -0.53
SCAF4-201ENST00000286835 BTNL8Q6UX41 500 aa11.71□□□□□ -0.53
SCAF4-201ENST00000286835 UBAC2Q8NBM4 344 aa11.71□□□□□ -0.53
SCAF4-201ENST00000286835 H3BQ15 152 aa11.71□□□□□ -0.54
SCAF4-201ENST00000286835 DHHO43323 396 aa11.71□□□□□ -0.54
SCAF4-201ENST00000286835 NRASP01111 189 aa11.71□□□□□ -0.54
SCAF4-201ENST00000286835 GALNSP34059 522 aa11.71□□□□□ -0.54
SCAF4-201ENST00000286835 OR2B11Q5JQS5 317 aa11.71□□□□□ -0.54
SCAF4-201ENST00000286835 ZNF774Q6NX45 483 aa11.71□□□□□ -0.54
SCAF4-201ENST00000286835 LINC00469Q8N7U9 141 aa11.71□□□□□ -0.54
SCAF4-201ENST00000286835 LFNGQ8NES3 379 aa11.71□□□□□ -0.54
SCAF4-201ENST00000286835 PP6455Q8WZ26 134 aa11.71□□□□□ -0.54
SCAF4-201ENST00000286835 BCO1Q9HAY6 547 aa11.71□□□□□ -0.54
SCAF4-201ENST00000286835 GAB2Q9UQC2 676 aa11.71□□□□□ -0.54
SCAF4-201ENST00000286835 NKX2-6A6NCS4 301 aa11.71□□□□□ -0.54
SCAF4-201ENST00000286835 RBFOX3A6NFN3 312 aa11.71□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 61.4 ms