RNA–Protein interactions for RNA: ENST00000286749.3

SLC28A1-201, Transcript of solute carrier family 28 member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SLC28A1, Length 2,636 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC28A1-201ENST00000286749 LGI3Q8N145 548 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 FBXL14Q8N1E6 418 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 FAM24BQ8N5W8 94 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 FAM213BQ8TBF2 198 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 BORCS8Q96FH0 119 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 TAAR9Q96RI9 348 aa11.49□□□□□ -0.57
SLC28A1-201ENST00000286749 CACNA1EQ15878 2313 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 A0A1W2PPE2 198 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 TNFSF11O14788 317 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 VAMP5O95183 116 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 LCATP04180 440 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 OR13C7P0DN81 318 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 RBP2P50120 134 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 SULT1A1P50225 295 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 MRPS34P82930 218 aaKnown RBP11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 IL13RA2Q14627 380 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 RAB35Q15286 201 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 MEX3BQ6ZN04 569 aaKnown RBP11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 KDF1Q8NAX2 398 aaPredicted RBP11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 CCDC74BQ96LY2 380 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 RSRP1Q9BUV0 290 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 ANGPTL4Q9BY76 406 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 TUBA4BQ9H853 241 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 STRAPQ9Y3F4 350 aaKnown RBP11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 TRIOBPQ9H2D6 2365 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 LINC00587B1AMM8 73 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 TERTO14746 1132 aaKnown RBP11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 PATE4P0C8F1 98 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 LIFP15018 202 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 PCOLCEQ15113 449 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 SLC35B3Q9H1N7 401 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 ZNF286AQ9HBT8 521 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 KCNJ16Q9NPI9 418 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 DKKL1Q9UK85 242 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 RFNGQ9Y644 331 aa11.48□□□□□ -0.57
SLC28A1-201ENST00000286749 PI4KAP42356 2102 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 A0A0J9YW62 118 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 SYNGR3O43761 229 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 GDF9O60383 454 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 ZIC3O60481 467 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 LMO1P25800 156 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 RAB5CP51148 216 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 OR2B8PP59922 312 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 Q6ZPA2 131 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 OSR2Q8N2R0 312 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 SLC35G3Q8N808 338 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 AKR7LQ8NHP1 331 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 DNASE2BQ8WZ79 361 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 MOB3AQ96BX8 217 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 TP53RKQ96S44 253 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 SRXN1Q9BYN0 137 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 BCO1Q9HAY6 547 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 ST3GAL6Q9Y274 331 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 NRASP01111 189 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 FABP1P07148 127 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 AADACP22760 399 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 ADAM5Q6NVV9 412 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 ASCL4Q6XD76 172 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 LHFPL2Q6ZUX7 228 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 BATF2Q8N1L9 274 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 OR1F12Q8NHA8 337 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 SYT3Q9BQG1 590 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 ZNF251Q9BRH9 671 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 PBDC1Q9BVG4 233 aa11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 METTL1Q9UBP6 276 aaKnown RBP11.47□□□□□ -0.57
SLC28A1-201ENST00000286749 NQO2P16083 231 aa11.46□□□□□ -0.57
SLC28A1-201ENST00000286749 DSCR4P56555 118 aaPredicted RBP11.46□□□□□ -0.57
SLC28A1-201ENST00000286749 HERV-K104P61576 105 aa11.46□□□□□ -0.57
SLC28A1-201ENST00000286749 EWSR1Q01844 656 aaKnown RBP eCLIP11.46□□□□□ -0.57
SLC28A1-201ENST00000286749 CLINT1Q14677 625 aa11.46□□□□□ -0.57
SLC28A1-201ENST00000286749 RHEBQ15382 184 aa11.46□□□□□ -0.57
SLC28A1-201ENST00000286749 MRPL14Q6P1L8 145 aaKnown RBP11.46□□□□□ -0.57
SLC28A1-201ENST00000286749 OR4D5Q8NGN0 318 aa11.46□□□□□ -0.57
SLC28A1-201ENST00000286749 OR1J1Q8NGS3 322 aa11.46□□□□□ -0.57
SLC28A1-201ENST00000286749 SLC39A7Q92504 469 aa11.46□□□□□ -0.57
SLC28A1-201ENST00000286749 BOD1Q96IK1 185 aa11.46□□□□□ -0.57
SLC28A1-201ENST00000286749 RARRES2Q99969 163 aa11.46□□□□□ -0.57
SLC28A1-201ENST00000286749 SEBOXQ9HB31 216 aaPredicted RBP11.46□□□□□ -0.57
SLC28A1-201ENST00000286749 PROK2Q9HC23 129 aa11.46□□□□□ -0.57
SLC28A1-201ENST00000286749 CRLF2Q9HC73 371 aa11.46□□□□□ -0.57
SLC28A1-201ENST00000286749 NIT2Q9NQR4 276 aa11.46□□□□□ -0.57
SLC28A1-201ENST00000286749 OCIAD1Q9NX40 245 aa11.46□□□□□ -0.57
SLC28A1-201ENST00000286749 FAM24AA6NFZ4 105 aa11.46□□□□□ -0.58
SLC28A1-201ENST00000286749 K7N7A8 449 aa11.46□□□□□ -0.58
SLC28A1-201ENST00000286749 GPR37O15354 613 aa11.46□□□□□ -0.58
SLC28A1-201ENST00000286749 ONECUT2O95948 504 aa11.46□□□□□ -0.58
SLC28A1-201ENST00000286749 B4GALT1P15291 398 aa11.46□□□□□ -0.58
SLC28A1-201ENST00000286749 PMELP40967 661 aa11.46□□□□□ -0.58
SLC28A1-201ENST00000286749 GNMTQ14749 295 aa11.46□□□□□ -0.58
SLC28A1-201ENST00000286749 SUMF1Q8NBK3 374 aa11.46□□□□□ -0.58
SLC28A1-201ENST00000286749 TCEAL3Q969E4 200 aa11.46□□□□□ -0.58
SLC28A1-201ENST00000286749 INTS12Q96CB8 462 aaKnown RBP11.46□□□□□ -0.58
SLC28A1-201ENST00000286749 GSN-AS1Q9NRJ2 163 aa11.46□□□□□ -0.58
SLC28A1-201ENST00000286749 NKX2-6A6NCS4 301 aa11.45□□□□□ -0.58
SLC28A1-201ENST00000286749 ZNF32P17041 273 aa11.45□□□□□ -0.58
SLC28A1-201ENST00000286749 ITGA3P26006 1051 aa11.45□□□□□ -0.58
SLC28A1-201ENST00000286749 COL19A1Q14993 1142 aa11.45□□□□□ -0.58
SLC28A1-201ENST00000286749 GPR137CQ8N3F9 429 aa11.45□□□□□ -0.58
SLC28A1-201ENST00000286749 ZNF565Q8N9K5 539 aa11.45□□□□□ -0.58
SLC28A1-201ENST00000286749 CCDC71LQ8N9Z2 235 aa11.45□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.5 ms