RNA–Protein interactions for RNA: ENST00000279247.10

CAPN1-201, Transcript of calpain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CAPN1, Length 3,007 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1-201ENST00000279247 HOXA4Q00056 320 aaPredicted RBP15.39■□□□□ 0.05
CAPN1-201ENST00000279247 ZMYND11Q15326 602 aa15.39■□□□□ 0.05
CAPN1-201ENST00000279247 CEACAM21Q3KPI0 293 aa15.39■□□□□ 0.05
CAPN1-201ENST00000279247 IGFL2Q6UWQ7 119 aa15.39■□□□□ 0.05
CAPN1-201ENST00000279247 ZNF546Q86UE3 836 aa15.39■□□□□ 0.05
CAPN1-201ENST00000279247 FOXRED2Q8IWF2 684 aa15.39■□□□□ 0.05
CAPN1-201ENST00000279247 OR5T2Q8NGG2 359 aa15.39■□□□□ 0.05
CAPN1-201ENST00000279247 MITD1Q8WV92 249 aa15.39■□□□□ 0.05
CAPN1-201ENST00000279247 RTBDNQ9BSG5 229 aaPredicted RBP15.39■□□□□ 0.05
CAPN1-201ENST00000279247 TLN1Q9Y490 2541 aaKnown RBP15.39■□□□□ 0.05
CAPN1-201ENST00000279247 TRAV14DV4A0A0A6YYC5 116 aa15.39■□□□□ 0.05
CAPN1-201ENST00000279247 PQLC2LA1A4F0 135 aa15.39■□□□□ 0.05
CAPN1-201ENST00000279247 TEX46H3BTG2 121 aa15.39■□□□□ 0.05
CAPN1-201ENST00000279247 HS3ST1O14792 307 aa15.39■□□□□ 0.05
CAPN1-201ENST00000279247 SS18L1O75177 396 aaPredicted RBP15.39■□□□□ 0.05
CAPN1-201ENST00000279247 RHBDL1O75783 438 aa15.39■□□□□ 0.05
CAPN1-201ENST00000279247 COX5BP10606 129 aa15.39■□□□□ 0.05
CAPN1-201ENST00000279247 S100A1P23297 94 aa15.39■□□□□ 0.05
CAPN1-201ENST00000279247 HOXC12P31275 282 aa15.39■□□□□ 0.05
CAPN1-201ENST00000279247 TMEM128Q5BJH2 165 aa15.39■□□□□ 0.05
CAPN1-201ENST00000279247 PXT1Q8NFP0 134 aa15.39■□□□□ 0.05
CAPN1-201ENST00000279247 TRAPPC2LH3BP13 241 aa15.38■□□□□ 0.05
CAPN1-201ENST00000279247 TMUB2Q71RG4 321 aa15.38■□□□□ 0.05
CAPN1-201ENST00000279247 RDH5Q92781 318 aa15.38■□□□□ 0.05
CAPN1-201ENST00000279247 WDR13Q9H1Z4 485 aa15.38■□□□□ 0.05
CAPN1-201ENST00000279247 ANAPC10Q9UM13 185 aa15.38■□□□□ 0.05
CAPN1-201ENST00000279247 PDCD6O75340 191 aa15.38■□□□□ 0.05
CAPN1-201ENST00000279247 SPDEFO95238 335 aa15.38■□□□□ 0.05
CAPN1-201ENST00000279247 ARL6IP1Q15041 203 aa15.38■□□□□ 0.05
CAPN1-201ENST00000279247 CXorf67Q86X51 503 aaPredicted RBP15.38■□□□□ 0.05
CAPN1-201ENST00000279247 METTL8Q9H825 291 aaKnown RBP15.38■□□□□ 0.05
CAPN1-201ENST00000279247 GSKIPQ9P0R6 139 aa15.38■□□□□ 0.05
CAPN1-201ENST00000279247 ANKRD34BA5PLL1 514 aa15.38■□□□□ 0.05
CAPN1-201ENST00000279247 PHLDA2Q53GA4 152 aa15.38■□□□□ 0.05
CAPN1-201ENST00000279247 ZNF610Q8N9Z0 462 aa15.38■□□□□ 0.05
CAPN1-201ENST00000279247 OR1J1Q8NGS3 322 aa15.38■□□□□ 0.05
CAPN1-201ENST00000279247 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP15.38■□□□□ 0.05
CAPN1-201ENST00000279247 OSGIN2Q9Y236 505 aa15.38■□□□□ 0.05
CAPN1-201ENST00000279247 TEX13DA0A0J9YY54 714 aaPredicted RBP15.37■□□□□ 0.05
CAPN1-201ENST00000279247 DUS4LO95620 317 aaKnown RBP15.37■□□□□ 0.05
CAPN1-201ENST00000279247 FUT3P21217 361 aa15.37■□□□□ 0.05
CAPN1-201ENST00000279247 FPR2P25090 351 aa15.37■□□□□ 0.05
CAPN1-201ENST00000279247 S100A11P31949 105 aa15.37■□□□□ 0.05
CAPN1-201ENST00000279247 SUPT4H1P63272 117 aaKnown RBP15.37■□□□□ 0.05
CAPN1-201ENST00000279247 ANKRD55Q3KP44 614 aa15.37■□□□□ 0.05
CAPN1-201ENST00000279247 SP6Q3SY56 376 aa15.37■□□□□ 0.05
CAPN1-201ENST00000279247 EXTL1Q92935 676 aa15.37■□□□□ 0.05
CAPN1-201ENST00000279247 C14orf166Q9Y224 244 aaKnown RBP15.37■□□□□ 0.05
CAPN1-201ENST00000279247 AQP7O14520 342 aa15.37■□□□□ 0.05
CAPN1-201ENST00000279247 MPZP25189 248 aa15.37■□□□□ 0.05
CAPN1-201ENST00000279247 CALCRP30988 508 aa15.37■□□□□ 0.05
CAPN1-201ENST00000279247 PPP1CBP62140 327 aa15.37■□□□□ 0.05
CAPN1-201ENST00000279247 ACSF3Q4G176 576 aaPredicted RBP15.37■□□□□ 0.05
CAPN1-201ENST00000279247 MKXQ8IYA7 352 aa15.37■□□□□ 0.05
CAPN1-201ENST00000279247 OR5L1Q8NGL2 311 aa15.37■□□□□ 0.05
CAPN1-201ENST00000279247 SLC25A40Q8TBP6 338 aa15.37■□□□□ 0.05
CAPN1-201ENST00000279247 PLCE1Q9P212 2302 aa15.36■□□□□ 0.05
CAPN1-201ENST00000279247 DIDO1Q9BTC0 2240 aaKnown RBP15.36■□□□□ 0.05
CAPN1-201ENST00000279247 BET1O15155 118 aa15.36■□□□□ 0.05
CAPN1-201ENST00000279247 FCGR2CP31995 323 aa15.36■□□□□ 0.05
CAPN1-201ENST00000279247 GABRA6Q16445 453 aa15.36■□□□□ 0.05
CAPN1-201ENST00000279247 IGSF11Q5DX21 431 aa15.36■□□□□ 0.05
CAPN1-201ENST00000279247 ASCL4Q6XD76 172 aa15.36■□□□□ 0.05
CAPN1-201ENST00000279247 Q6ZPA2 131 aa15.36■□□□□ 0.05
CAPN1-201ENST00000279247 Q6ZT83 130 aa15.36■□□□□ 0.05
CAPN1-201ENST00000279247 SH3BGRL2Q9UJC5 107 aa15.36■□□□□ 0.05
CAPN1-201ENST00000279247 ADGRG4Q8IZF6 3080 aa15.36■□□□□ 0.05
CAPN1-201ENST00000279247 TRAV39A0A0B4J263 110 aa15.36■□□□□ 0.05
CAPN1-201ENST00000279247 IFNA7P01567 189 aa15.36■□□□□ 0.05
CAPN1-201ENST00000279247 IL2RAP01589 272 aa15.36■□□□□ 0.05
CAPN1-201ENST00000279247 GRPP07492 148 aa15.36■□□□□ 0.05
CAPN1-201ENST00000279247 ZNF14P17017 642 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-201ENST00000279247 DAZAP2Q15038 168 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-201ENST00000279247 LHFPL1Q86WI0 220 aa15.36■□□□□ 0.05
CAPN1-201ENST00000279247 ZNF75AQ96N20 296 aa15.36■□□□□ 0.05
CAPN1-201ENST00000279247 MYOZ1Q9NP98 299 aaPredicted RBP15.36■□□□□ 0.05
CAPN1-201ENST00000279247 TAS2R31P59538 309 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 MPPED2Q15777 294 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 COQ8AQ8NI60 647 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 UBALD1Q8TB05 177 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 TECTBQ96PL2 329 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 GPHA2Q96T91 129 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 C12orf4Q9NQ89 552 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 UBQLN2Q9UHD9 624 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 RFPL4AA6NLU0 287 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 RFPL4AL1F8VTS6 287 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 SMPD2O60906 423 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 OR5P3Q8WZ94 311 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 MBD2Q9UBB5 411 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 HSF4Q9ULV5 492 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 WDR1O75083 606 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 CST4P01036 141 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 FABP6P51161 128 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 MRPL49Q13405 166 aaKnown RBP15.35■□□□□ 0.05
CAPN1-201ENST00000279247 ZNF71Q9NQZ8 489 aaPredicted RBP15.35■□□□□ 0.05
CAPN1-201ENST00000279247 PCDHB16Q9NRJ7 776 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 NECAP2Q9NVZ3 263 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 MAB21L2Q9Y586 359 aa15.35■□□□□ 0.05
CAPN1-201ENST00000279247 H0YL77 283 aa15.34■□□□□ 0.05
CAPN1-201ENST00000279247 RP2O75695 350 aa15.34■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms