RNA–Protein interactions for RNA: ENST00000269228.9

NPC1-201, Transcript of NPC intracellular cholesterol transporter 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NPC1, Length 5,157 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPC1-201ENST00000269228 HOXD4P09016 255 aaPredicted RBP12.02□□□□□ -0.48
NPC1-201ENST00000269228 RPS4Y1P22090 263 aaKnown RBP12.02□□□□□ -0.48
NPC1-201ENST00000269228 C19orf48Q6RUI8 117 aa12.02□□□□□ -0.48
NPC1-201ENST00000269228 POC1BQ8TC44 478 aa12.02□□□□□ -0.48
NPC1-201ENST00000269228 SLC39A7Q92504 469 aa12.02□□□□□ -0.48
NPC1-201ENST00000269228 WDR13Q9H1Z4 485 aa12.02□□□□□ -0.48
NPC1-201ENST00000269228 MS4A5Q9H3V2 200 aa12.02□□□□□ -0.48
NPC1-201ENST00000269228 F6UZH7 168 aa12.02□□□□□ -0.49
NPC1-201ENST00000269228 NDUFB6O95139 128 aa12.02□□□□□ -0.49
NPC1-201ENST00000269228 VMA21Q3ZAQ7 101 aa12.02□□□□□ -0.49
NPC1-201ENST00000269228 SOHLH1Q5JUK2 328 aa12.02□□□□□ -0.49
NPC1-201ENST00000269228 RFLNBQ8N5W9 214 aa12.02□□□□□ -0.49
NPC1-201ENST00000269228 TMED6Q8WW62 240 aa12.02□□□□□ -0.49
NPC1-201ENST00000269228 FAM122AQ96E09 287 aa12.02□□□□□ -0.49
NPC1-201ENST00000269228 CLEC18AA5D8T8 446 aa12.02□□□□□ -0.49
NPC1-201ENST00000269228 B3GALNT1O75752 331 aa12.02□□□□□ -0.49
NPC1-201ENST00000269228 JTBO76095 146 aa12.02□□□□□ -0.49
NPC1-201ENST00000269228 CLEC3BP05452 202 aa12.02□□□□□ -0.49
NPC1-201ENST00000269228 CLEC18CQ8NCF0 446 aa12.02□□□□□ -0.49
NPC1-201ENST00000269228 ADAT3Q96EY9 351 aaPredicted RBP12.02□□□□□ -0.49
NPC1-201ENST00000269228 RNF7Q9UBF6 113 aa12.02□□□□□ -0.49
NPC1-201ENST00000269228 ZNF646O15015 1829 aaPredicted RBP12.02□□□□□ -0.49
NPC1-201ENST00000269228 PDGFAP04085 211 aa12.02□□□□□ -0.49
NPC1-201ENST00000269228 HOXA6P31267 233 aa12.02□□□□□ -0.49
NPC1-201ENST00000269228 P2RY6Q15077 328 aa12.02□□□□□ -0.49
NPC1-201ENST00000269228 TRAT1Q6PIZ9 186 aa12.02□□□□□ -0.49
NPC1-201ENST00000269228 WDR89Q96FK6 387 aaPredicted RBP12.02□□□□□ -0.49
NPC1-201ENST00000269228 AICDAQ9GZX7 198 aa12.02□□□□□ -0.49
NPC1-201ENST00000269228 PLEKHA2Q9HB19 425 aa12.02□□□□□ -0.49
NPC1-201ENST00000269228 ARHGEF17Q96PE2 2063 aaPredicted RBP12.02□□□□□ -0.49
NPC1-201ENST00000269228 J3QT63 122 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 ST8SIA5O15466 376 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 PGA4P0DJD7 388 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 PGA3P0DJD8 388 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 M6PRP20645 277 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 PSMB3P49720 205 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 IRF3Q14653 427 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 COL19A1Q14993 1142 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 SKA3Q8IX90 412 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 OR6C3Q9NZP0 311 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 STARD10Q9Y365 291 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 MS4A18H0YCH9 400 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 TGFBR3LH3BV60 316 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 TAAR5O14804 337 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 H2AFB1P0C5Y9 115 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 NANOS3P60323 173 aaKnown RBP12.01□□□□□ -0.49
NPC1-201ENST00000269228 MS4A18Q3C1V0 323 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 OR5AP2Q8NGF4 316 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 MS4A3Q96HJ5 214 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 OR2D2Q9H210 308 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 TXNDC12O95881 172 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 TTRP02766 147 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 DTYMKP23919 212 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 SCARB1Q8WTV0 552 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 RBM38Q9H0Z9 239 aaKnown RBP12.01□□□□□ -0.49
NPC1-201ENST00000269228 MTCL1Q9Y4B5 1905 aaKnown RBP12.01□□□□□ -0.49
NPC1-201ENST00000269228 HAND1O96004 215 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 SULT1A3P0DMM9 295 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 SULT1A4P0DMN0 295 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 RTP5Q14D33 572 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 YIPF5Q969M3 257 aa12.01□□□□□ -0.49
NPC1-201ENST00000269228 RCL1Q9Y2P8 373 aaKnown RBP12.01□□□□□ -0.49
NPC1-201ENST00000269228 ZSWIM8A7E2V4 1837 aa12□□□□□ -0.49
NPC1-201ENST00000269228 SCAF4O95104 1147 aaKnown RBP12□□□□□ -0.49
NPC1-201ENST00000269228 RECKO95980 971 aa12□□□□□ -0.49
NPC1-201ENST00000269228 GLDNQ6ZMI3 551 aaPredicted RBP12□□□□□ -0.49
NPC1-201ENST00000269228 ZDHHC22Q8N966 263 aa12□□□□□ -0.49
NPC1-201ENST00000269228 OR5A2Q8NGI9 324 aa12□□□□□ -0.49
NPC1-201ENST00000269228 KCNK17Q96T54 332 aa12□□□□□ -0.49
NPC1-201ENST00000269228 CHST5Q9GZS9 411 aa12□□□□□ -0.49
NPC1-201ENST00000269228 NME2P1O60361 137 aa12□□□□□ -0.49
NPC1-201ENST00000269228 ALX3O95076 343 aa12□□□□□ -0.49
NPC1-201ENST00000269228 LPAR6P43657 344 aa12□□□□□ -0.49
NPC1-201ENST00000269228 SVBPQ8N300 66 aa12□□□□□ -0.49
NPC1-201ENST00000269228 CORO2AQ92828 525 aa12□□□□□ -0.49
NPC1-201ENST00000269228 MRPS18AQ9NVS2 196 aaKnown RBP12□□□□□ -0.49
NPC1-201ENST00000269228 AK3Q9UIJ7 227 aa12□□□□□ -0.49
NPC1-201ENST00000269228 GGTLC2Q14390 218 aa12□□□□□ -0.49
NPC1-201ENST00000269228 LCN15Q6UWW0 184 aa12□□□□□ -0.49
NPC1-201ENST00000269228 TMEM91Q6ZNR0 172 aa12□□□□□ -0.49
NPC1-201ENST00000269228 WNT2BQ93097 391 aa12□□□□□ -0.49
NPC1-201ENST00000269228 GNPNAT1Q96EK6 184 aaPredicted RBP12□□□□□ -0.49
NPC1-201ENST00000269228 POM121L2Q96KW2 1035 aa12□□□□□ -0.49
NPC1-201ENST00000269228 IGKV3D-11A0A0A0MRZ8 115 aa12□□□□□ -0.49
NPC1-201ENST00000269228 CYTIPO60759 359 aa12□□□□□ -0.49
NPC1-201ENST00000269228 KIR3DL2P43630 455 aa12□□□□□ -0.49
NPC1-201ENST00000269228 RAB7AP51149 207 aa12□□□□□ -0.49
NPC1-201ENST00000269228 ZCCHC14Q8WYQ9 949 aaKnown RBP12□□□□□ -0.49
NPC1-201ENST00000269228 HGDQ93099 445 aa12□□□□□ -0.49
NPC1-201ENST00000269228 GPX7Q96SL4 187 aaPredicted RBP12□□□□□ -0.49
NPC1-201ENST00000269228 CST7O76096 145 aa11.99□□□□□ -0.49
NPC1-201ENST00000269228 HRASP01112 189 aa11.99□□□□□ -0.49
NPC1-201ENST00000269228 TGM1P22735 817 aa11.99□□□□□ -0.49
NPC1-201ENST00000269228 ACKR3P25106 362 aa11.99□□□□□ -0.49
NPC1-201ENST00000269228 ADGRG7Q96K78 797 aa11.99□□□□□ -0.49
NPC1-201ENST00000269228 SIGLEC12Q96PQ1 595 aa11.99□□□□□ -0.49
NPC1-201ENST00000269228 AMELYQ99218 206 aa11.99□□□□□ -0.49
NPC1-201ENST00000269228 SRXN1Q9BYN0 137 aa11.99□□□□□ -0.49
NPC1-201ENST00000269228 ST6GALNAC2Q9UJ37 374 aa11.99□□□□□ -0.49
NPC1-201ENST00000269228 SIRT4Q9Y6E7 314 aaPredicted RBP11.99□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms