RNA–Protein interactions for RNA: ENST00000269138.9

SS18-202, Transcript of SS18, nBAF chromatin remodeling complex subunit, humanhuman

TSL 2

Gene SS18, Length 1,548 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SS18-202ENST00000269138 GLIPR1L1Q6UWM5 242 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 CDH26Q8IXH8 852 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 PNLDC1Q8NA58 520 aaKnown RBP10.58□□□□□ -0.72
SS18-202ENST00000269138 TMEM185AQ8NFB2 350 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 FAHD2AQ96GK7 314 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 SLITRK2Q9H156 845 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 EXOSC4Q9NPD3 245 aaKnown RBP10.58□□□□□ -0.72
SS18-202ENST00000269138 OR5V1Q9UGF6 321 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 STUB1Q9UNE7 303 aa10.58□□□□□ -0.72
SS18-202ENST00000269138 MRPS28Q9Y2Q9 187 aaKnown RBP10.58□□□□□ -0.72
SS18-202ENST00000269138 AK6Q9Y3D8 172 aaKnown RBP10.58□□□□□ -0.72
SS18-202ENST00000269138 SONP18583 2426 aaKnown RBP10.57□□□□□ -0.72
SS18-202ENST00000269138 A0A1W2PP11 408 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 TMEM82A0PJX8 343 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 HAND1O96004 215 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 AVPP01185 164 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 CD37P11049 281 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 NDUFB7P17568 137 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 NPY4RP50391 375 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 ZNF146Q15072 292 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 CR1LQ2VPA4 569 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 SLC22A6Q4U2R8 563 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 LRRC10Q5BKY1 277 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 DCAF12L2Q5VW00 463 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 ELP2Q6IA86 826 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 IL17RELQ6ZVW7 336 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 BTN2A1Q7KYR7 527 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 NKAIN3Q8N8D7 197 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 RAB40AQ8WXH6 277 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 DACT3Q96B18 629 aaPredicted RBP10.57□□□□□ -0.72
SS18-202ENST00000269138 C1orf147Q96MC9 270 aaPredicted RBP10.57□□□□□ -0.72
SS18-202ENST00000269138 METTL9Q9H1A3 318 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 RNF167Q9H6Y7 350 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 VCX3AQ9NNX9 186 aa10.57□□□□□ -0.72
SS18-202ENST00000269138 TXNL4BQ9NX01 149 aaKnown RBP10.57□□□□□ -0.72
SS18-202ENST00000269138 SLC25A10Q9UBX3 287 aaPredicted RBP10.57□□□□□ -0.72
SS18-202ENST00000269138 HIVEP2P31629 2446 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 IGHV2-70DA0A0C4DH43 119 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 SIRPB1O00241 398 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 ZNF737O75373 536 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 CHRM2P08172 466 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 SERPINA2P20848 420 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 GALP22466 123 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 MTNR1BP49286 362 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 CAPZA1P52907 286 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 FGF12P61328 243 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 SCN1BQ07699 218 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 PIGYQ3MUY2 71 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 C1orf100Q5SVJ3 147 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 GLT8D1Q68CQ7 371 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 AWAT2Q6E213 333 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 Q6P435 159 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 METAP1DQ6UB28 335 aaPredicted RBP10.56□□□□□ -0.72
SS18-202ENST00000269138 C1orf229Q6ZS94 237 aaPredicted RBP10.56□□□□□ -0.72
SS18-202ENST00000269138 ZNF561Q8N587 486 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 Q8NFD4 153 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 YIPF6Q96EC8 236 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 NUDT16L1Q9BRJ7 211 aaKnown RBP10.56□□□□□ -0.72
SS18-202ENST00000269138 CHCHD6Q9BRQ6 235 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 UQCC2Q9BRT2 126 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 TMPRSS13Q9BYE2 586 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 RHOFQ9HBH0 211 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 IL36GQ9NZH8 169 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 ZNF581Q9P0T4 197 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 SSR3Q9UNL2 185 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 INSIG2Q9Y5U4 225 aa10.56□□□□□ -0.72
SS18-202ENST00000269138 FN1P02751 2386 aaKnown RBP10.56□□□□□ -0.72
SS18-202ENST00000269138 TRAV1-2A0A0B4J238 106 aa10.55□□□□□ -0.72
SS18-202ENST00000269138 PPIAL4CA0A0B4J2A2 164 aa10.55□□□□□ -0.72
SS18-202ENST00000269138 A0A0G2JMP0 313 aa10.55□□□□□ -0.72
SS18-202ENST00000269138 A0A0X1KG70 313 aa10.55□□□□□ -0.72
SS18-202ENST00000269138 KIR2DS1A0A191URI9 304 aa10.55□□□□□ -0.72
SS18-202ENST00000269138 OR2H2O95918 312 aa10.55□□□□□ -0.72
SS18-202ENST00000269138 FGF9P31371 208 aaPredicted RBP10.55□□□□□ -0.72
SS18-202ENST00000269138 OR10A3P58181 314 aa10.55□□□□□ -0.72
SS18-202ENST00000269138 SPIN3Q5JUX0 258 aa10.55□□□□□ -0.72
SS18-202ENST00000269138 FAM120AOSQ5T036 256 aa10.55□□□□□ -0.72
SS18-202ENST00000269138 FIP1L1Q6UN15 594 aaKnown RBP10.55□□□□□ -0.72
SS18-202ENST00000269138 C17orf107Q6ZR85 190 aa10.55□□□□□ -0.72
SS18-202ENST00000269138 ASCC1Q8N9N2 400 aaKnown RBP10.55□□□□□ -0.72
SS18-202ENST00000269138 OR4M2Q8NGB6 313 aa10.55□□□□□ -0.72
SS18-202ENST00000269138 TBC1D15Q8TC07 691 aa10.55□□□□□ -0.72
SS18-202ENST00000269138 H1FXQ92522 213 aaKnown RBP10.55□□□□□ -0.72
SS18-202ENST00000269138 FOXRED1Q96CU9 486 aaPredicted RBP10.55□□□□□ -0.72
SS18-202ENST00000269138 S100A13Q99584 98 aa10.55□□□□□ -0.72
SS18-202ENST00000269138 CHST6Q9GZX3 395 aa10.55□□□□□ -0.72
SS18-202ENST00000269138 SHARPINQ9H0F6 387 aa10.55□□□□□ -0.72
SS18-202ENST00000269138 KCNK15Q9H427 330 aa10.55□□□□□ -0.72
SS18-202ENST00000269138 SEBOXQ9HB31 216 aaPredicted RBP10.55□□□□□ -0.72
SS18-202ENST00000269138 OPN4Q9UHM6 478 aa10.55□□□□□ -0.72
SS18-202ENST00000269138 RPUSD1Q9UJJ7 312 aaKnown RBP10.55□□□□□ -0.72
SS18-202ENST00000269138 LOC100506127A0A0U1RQW1 187 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 SMIM30A4D0T7 59 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 K7N7A8 449 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 SH2D1BO14796 132 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 PSPNO60542 156 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 CSTBP04080 98 aaKnown RBP10.54□□□□□ -0.72
SS18-202ENST00000269138 TK1P04183 234 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 BMXP51813 675 aa10.54□□□□□ -0.72
SS18-202ENST00000269138 CAV3P56539 151 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms