RNA–Protein interactions for RNA: ENST00000268607.9

MAP1LC3B-201, Transcript of microtubule associated protein 1 light chain 3 beta, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene MAP1LC3B, Length 2,688 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MAP1LC3B-201ENST00000268607 TGIF2-C20orf24A0A0A6YYL0 155 aa13.95□□□□□ -0.18
MAP1LC3B-201ENST00000268607 GAPDHP04406 335 aaKnown RBP13.95□□□□□ -0.18
MAP1LC3B-201ENST00000268607 RPS2P15880 293 aaKnown RBP13.95□□□□□ -0.18
MAP1LC3B-201ENST00000268607 CAMLGP49069 296 aa13.95□□□□□ -0.18
MAP1LC3B-201ENST00000268607 TRIP6Q15654 476 aaKnown RBP13.95□□□□□ -0.18
MAP1LC3B-201ENST00000268607 HIST2H3PS2Q5TEC6 136 aa13.95□□□□□ -0.18
MAP1LC3B-201ENST00000268607 HES3Q5TGS1 186 aa13.95□□□□□ -0.18
MAP1LC3B-201ENST00000268607 AADACL3Q5VUY0 350 aa13.95□□□□□ -0.18
MAP1LC3B-201ENST00000268607 NUP54Q7Z3B4 507 aa13.95□□□□□ -0.18
MAP1LC3B-201ENST00000268607 NAXEQ8NCW5 288 aa13.95□□□□□ -0.18
MAP1LC3B-201ENST00000268607 ZNF248Q8NDW4 579 aa13.95□□□□□ -0.18
MAP1LC3B-201ENST00000268607 OR5H2Q8NGV7 314 aa13.95□□□□□ -0.18
MAP1LC3B-201ENST00000268607 OR14K1Q8NGZ2 314 aa13.95□□□□□ -0.18
MAP1LC3B-201ENST00000268607 TMEM234Q8WY98 164 aa13.95□□□□□ -0.18
MAP1LC3B-201ENST00000268607 RAB24Q969Q5 203 aa13.95□□□□□ -0.18
MAP1LC3B-201ENST00000268607 C5orf34Q96MH7 638 aa13.95□□□□□ -0.18
MAP1LC3B-201ENST00000268607 BANF2Q9H503 90 aa13.95□□□□□ -0.18
MAP1LC3B-201ENST00000268607 COL5A1P20908 1838 aaPredicted RBP13.95□□□□□ -0.18
MAP1LC3B-201ENST00000268607 EML6Q6ZMW3 1958 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 MARCH11A6NNE9 402 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 CEACAM18A8MTB9 384 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 CYB5BO43169 146 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 PTBP3O95758 552 aaKnown RBP13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 MPIG6BO95866 241 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 SCGB1D2O95969 90 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 HSD11B1P28845 292 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 IL11RAQ14626 422 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 SOHLH1Q5JUK2 328 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 PRAMEF20Q5VT98 475 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 RPUSD3Q6P087 351 aaKnown RBP13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 OPN5Q6U736 354 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 PEG10Q86TG7 708 aaKnown RBP13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 ST6GALNAC5Q9BVH7 336 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 LPAR5Q9H1C0 372 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 MED13Q9UHV7 2174 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 DANCRP0C864 163 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 ZNF883P0CG24 379 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 TLE3Q04726 772 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 C4orf17Q53FE4 359 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 GGNBP1Q5YKI7 109 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 PRRX2Q99811 253 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 METTL7AQ9H8H3 244 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 MYOTQ9UBF9 498 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 TMED3Q9Y3Q3 217 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 ZZEF1O43149 2961 aa13.94□□□□□ -0.18
MAP1LC3B-201ENST00000268607 PHF3Q92576 2039 aaKnown RBP13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 ELOA3CA0A087WX78 387 aaPredicted RBP13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 A0A1W2PP11 408 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 SMCO3A2RU48 225 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 ANKUB1A6NFN9 424 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 TMEM14DPA8MWL7 114 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 KLF7O75840 302 aaPredicted RBP13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 PRH1P02810 166 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 UMODP07911 640 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 ZNF25P17030 456 aaPredicted RBP13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 TCN2P20062 427 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 APLNRP35414 380 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 GLO1Q04760 184 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 HIST1H2BLQ99880 126 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 A0A1W2PNR3 127 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 C9orf172C9J069 976 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 NPIPA5E9PKD4 350 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 DEDDO75618 318 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 TRGC1P0CF51 173 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 AMY2BP19961 511 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 UCP2P55851 309 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 PCK2Q16822 640 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 MRPL14Q6P1L8 145 aaKnown RBP13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 GLIPR1L1Q6UWM5 242 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 COMMD1Q8N668 190 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 OR5R1Q8NH85 324 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 MFSD8Q8NHS3 518 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 ABHD5Q8WTS1 349 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 RARRES2Q99969 163 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 NELFAQ9H3P2 528 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 C19orf12Q9NSK7 152 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 OR14J1Q9UGF5 321 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 NPIPA1Q9UND3 350 aa13.93□□□□□ -0.18
MAP1LC3B-201ENST00000268607 A0A087WZY1 265 aa13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 TNFSF12-TNFSF13A0A0A6YY99 330 aa13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 HIST1H1DP16402 221 aaKnown RBP13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 ZNF93P35789 620 aaPredicted RBP13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 TAGLN2P37802 199 aaKnown RBP13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 CD200P41217 278 aa13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 OR3A2P47893 321 aa13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 CEBPGP53567 150 aa13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 TMEM50BP56557 158 aa13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 DCAF12Q5T6F0 453 aa13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 HIST2H2ABQ8IUE6 130 aaPredicted RBP13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 SCGB3A2Q96PL1 93 aa13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 DDA1Q9BW61 102 aa13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 DEFB126Q9BYW3 111 aa13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 SH3BGRL3Q9H299 93 aa13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 VSX1Q9NZR4 365 aaPredicted RBP13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 LUZP4Q9P127 313 aa13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 VSTM2BA6NLU5 285 aa13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 SCGNO76038 276 aa13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 ZFAND5O76080 213 aa13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 MT-CO3P00414 261 aa13.92□□□□□ -0.18
MAP1LC3B-201ENST00000268607 ZNF823P16415 610 aa13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 26.2 ms