RNA–Protein interactions for RNA: ENST00000267996.11

TPM1-201, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-201ENST00000267996 ARPC1BO15143 372 aaKnown RBP13.89□□□□□ -0.19
TPM1-201ENST00000267996 HNRNPCP07910 306 aaKnown RBP eCLIP13.89□□□□□ -0.19
TPM1-201ENST00000267996 DTYMKP23919 212 aa13.89□□□□□ -0.19
TPM1-201ENST00000267996 HRH1P35367 487 aa13.89□□□□□ -0.19
TPM1-201ENST00000267996 KLF3P57682 345 aaPredicted RBP13.89□□□□□ -0.19
TPM1-201ENST00000267996 MAB21L1Q13394 359 aa13.89□□□□□ -0.19
TPM1-201ENST00000267996 MICBQ29980 383 aa13.89□□□□□ -0.19
TPM1-201ENST00000267996 WFIKKN1Q96NZ8 548 aa13.89□□□□□ -0.19
TPM1-201ENST00000267996 SLC25A21Q9BQT8 299 aaPredicted RBP13.89□□□□□ -0.19
TPM1-201ENST00000267996 GINS4Q9BRT9 223 aa13.89□□□□□ -0.19
TPM1-201ENST00000267996 CHST6Q9GZX3 395 aa13.89□□□□□ -0.19
TPM1-201ENST00000267996 IFT22Q9H7X7 185 aa13.89□□□□□ -0.19
TPM1-201ENST00000267996 MSL2Q9HCI7 577 aa13.89□□□□□ -0.19
TPM1-201ENST00000267996 SCP2D1Q9UJQ7 156 aa13.89□□□□□ -0.19
TPM1-201ENST00000267996 COL6A6A6NMZ7 2263 aa13.89□□□□□ -0.19
TPM1-201ENST00000267996 A0A1B0GUH1 482 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 F5H5P2 479 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 PYCARD-AS1I3L0S3 204 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 CDIPTO14735 213 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 PRAF2O60831 178 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 PTBP3O95758 552 aaKnown RBP13.88□□□□□ -0.19
TPM1-201ENST00000267996 IL5P05113 134 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 PRKACAP17612 351 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 SNU13P55769 128 aaKnown RBP13.88□□□□□ -0.19
TPM1-201ENST00000267996 MZT1Q08AG7 82 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 PDCD1Q15116 288 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 IDO2Q6ZQW0 420 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 BEST4Q8NFU0 473 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 OR13C8Q8NGS7 320 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 GIMAP1Q8WWP7 306 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 RNASE6Q93091 150 aaKnown RBP13.88□□□□□ -0.19
TPM1-201ENST00000267996 MED30Q96HR3 178 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 PRRT1Q99946 306 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 CMSS1Q9BQ75 279 aaKnown RBP13.88□□□□□ -0.19
TPM1-201ENST00000267996 HDHD3Q9BSH5 251 aaPredicted RBP13.88□□□□□ -0.19
TPM1-201ENST00000267996 COQ3Q9NZJ6 369 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 DUSP13Q9UII6 198 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 EDARQ9UNE0 448 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 BOLA2-SMG1P6H3BVE0 249 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 GRPP07492 148 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 AMY2BP19961 511 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 CD200P41217 278 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 RRAS2P62070 204 aaPredicted RBP13.88□□□□□ -0.19
TPM1-201ENST00000267996 BRICD5Q6PL45 260 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 POC1AQ8NBT0 407 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 OR6F1Q8NGZ6 308 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 ST6GALNAC5Q9BVH7 336 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 SPACA1Q9HBV2 294 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 HES4Q9HCC6 221 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 NGBQ9NPG2 151 aa13.88□□□□□ -0.19
TPM1-201ENST00000267996 ZNF230Q9UIE0 474 aaPredicted RBP13.88□□□□□ -0.19
TPM1-201ENST00000267996 CCNKO75909 580 aa13.87□□□□□ -0.19
TPM1-201ENST00000267996 PMP2P02689 132 aa13.87□□□□□ -0.19
TPM1-201ENST00000267996 GLAP06280 429 aa13.87□□□□□ -0.19
TPM1-201ENST00000267996 TAS2R46P59540 309 aa13.87□□□□□ -0.19
TPM1-201ENST00000267996 BSPH1Q075Z2 132 aa13.87□□□□□ -0.19
TPM1-201ENST00000267996 NKPD1Q17RQ9 610 aa13.87□□□□□ -0.19
TPM1-201ENST00000267996 VHLLQ6RSH7 139 aa13.87□□□□□ -0.19
TPM1-201ENST00000267996 SLC36A1Q7Z2H8 476 aa13.87□□□□□ -0.19
TPM1-201ENST00000267996 ARRDC1Q8N5I2 433 aa13.87□□□□□ -0.19
TPM1-201ENST00000267996 MRPL24Q96A35 216 aaKnown RBP13.87□□□□□ -0.19
TPM1-201ENST00000267996 MRPL37Q9BZE1 423 aaKnown RBP13.87□□□□□ -0.19
TPM1-201ENST00000267996 OR51J1Q9H342 316 aa13.87□□□□□ -0.19
TPM1-201ENST00000267996 ZNF442Q9H7R0 627 aa13.87□□□□□ -0.19
TPM1-201ENST00000267996 IGKV1D-8A0A087WSZ0 117 aa13.86□□□□□ -0.19
TPM1-201ENST00000267996 UBE2QL1A1L167 161 aa13.86□□□□□ -0.19
TPM1-201ENST00000267996 ZSCAN5BA6NJL1 495 aa13.86□□□□□ -0.19
TPM1-201ENST00000267996 ABCD4O14678 606 aa13.86□□□□□ -0.19
TPM1-201ENST00000267996 ATXN7O15265 892 aaPredicted RBP13.86□□□□□ -0.19
TPM1-201ENST00000267996 FCGR3AP08637 254 aa13.86□□□□□ -0.19
TPM1-201ENST00000267996 IKZF1Q13422 519 aa13.86□□□□□ -0.19
TPM1-201ENST00000267996 ST3GAL2Q16842 350 aa13.86□□□□□ -0.19
TPM1-201ENST00000267996 ATAD3CQ5T2N8 411 aa13.86□□□□□ -0.19
TPM1-201ENST00000267996 Q6P435 159 aa13.86□□□□□ -0.19
TPM1-201ENST00000267996 PIAS4Q8N2W9 510 aaPredicted RBP13.86□□□□□ -0.19
TPM1-201ENST00000267996 OR5AP2Q8NGF4 316 aa13.86□□□□□ -0.19
TPM1-201ENST00000267996 OR5H2Q8NGV7 314 aa13.86□□□□□ -0.19
TPM1-201ENST00000267996 GTF3AQ92664 365 aaKnown RBP13.86□□□□□ -0.19
TPM1-201ENST00000267996 MRGPRFQ96AM1 343 aa13.86□□□□□ -0.19
TPM1-201ENST00000267996 ST6GAL2Q96JF0 529 aa13.86□□□□□ -0.19
TPM1-201ENST00000267996 SYT3Q9BQG1 590 aa13.86□□□□□ -0.19
TPM1-201ENST00000267996 ALX4Q9H161 411 aaPredicted RBP13.86□□□□□ -0.19
TPM1-201ENST00000267996 MYOZ1Q9NP98 299 aaPredicted RBP13.86□□□□□ -0.19
TPM1-201ENST00000267996 CA10Q9NS85 328 aa13.86□□□□□ -0.19
TPM1-201ENST00000267996 FAM90A27PA6NNH2 459 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 IFNA6P05013 189 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 CSN2P05814 226 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 ANXA7P20073 488 aaKnown RBP13.85□□□□□ -0.19
TPM1-201ENST00000267996 DUSP1P28562 367 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 SELENOVP59797 346 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 ZNF146Q15072 292 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 METTL11BQ5VVY1 283 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 GLDNQ6ZMI3 551 aaPredicted RBP13.85□□□□□ -0.19
TPM1-201ENST00000267996 OR2Z1Q8NG97 314 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 MAFIPQ8WZ33 124 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 DYRK2Q92630 601 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 BEX2Q9BXY8 128 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 BEX1Q9HBH7 125 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 C12orf4Q9NQ89 552 aa13.85□□□□□ -0.19
TPM1-201ENST00000267996 ZNF701Q9NV72 531 aaPredicted RBP13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms