RNA–Protein interactions for RNA: ENST00000265036.9

DEPDC1B-201, Transcript of DEP domain containing 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DEPDC1B, Length 2,499 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1B-201ENST00000265036 SOX21Q9Y651 276 aaPredicted RBP6□□□□□ -1.45
DEPDC1B-201ENST00000265036 A0A1W2PQ09 198 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 A0A1W2PRD5 423 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 A0A1W2PRF3 423 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 A0A1W2PRM7 423 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 VGLL3A8MV65 326 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 SIGLEC5O15389 551 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 HTR3BO95264 441 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 HAND1O96004 215 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 ACAA1P09110 424 aaPredicted RBP5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 IGHV4-38-2P0DP08 117 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 ZNF44P15621 663 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 CPEP16870 476 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 IGFBP3P17936 291 aaPredicted RBP5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 HNF1AP20823 631 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 PCMT1P22061 227 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 CALRP27797 417 aaKnown RBP5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 EDDM3BP56851 147 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 PAX2Q02962 417 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 ACSM1Q08AH1 577 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 RSU1Q15404 277 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 ZNF773Q6PK81 442 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 BTNL3Q6UXE8 466 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 MKXQ8IYA7 352 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 OR4D6Q8NGJ1 314 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 RAB40AQ8WXH6 277 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 PPA2Q9H2U2 334 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 CNTD2Q9H8S5 307 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 EXOSC4Q9NPD3 245 aaKnown RBP5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 C19orf12Q9NSK7 152 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 OPN4Q9UHM6 478 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 RPUSD1Q9UJJ7 312 aaKnown RBP5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 ING4Q9UNL4 249 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 INSIG2Q9Y5U4 225 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 AUP1Q9Y679 476 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 TMEM82A0PJX8 343 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 NDUFA2O43678 99 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 ENSAO43768 121 aaKnown RBP5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 PSPNO60542 156 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 FSTP19883 344 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 KLRD1Q13241 179 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 TPBGQ13641 420 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 ATXN7L3Q14CW9 347 aaPredicted RBP5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 HSD17B12Q53GQ0 312 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 RUSC1-AS1Q66K80 236 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 AWAT2Q6E213 333 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 OR10K2Q6IF99 312 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 PRIMA1Q86XR5 153 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 SVOPQ8N4V2 548 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 MS4A15Q8N5U1 240 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 DACT3Q96B18 629 aaPredicted RBP5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 MRI1Q9BV20 369 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 OCEL1Q9H607 264 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 TCF7L1Q9HCS4 588 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 KAAG1Q9UBP8 84 aa5.99□□□□□ -1.45
DEPDC1B-201ENST00000265036 PPIAL4CA0A0B4J2A2 164 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 SHISA3A0PJX4 238 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 NOS1APO75052 506 aaPredicted RBP5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 OR2H2O95918 312 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 KNG1P01042 644 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 PPIAL4GP0DN37 164 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 CCL3L1P16619 93 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 MAPK3P27361 379 aaPredicted RBP5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 PTGFRP43088 359 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 CLDN12P56749 244 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 ZNF273Q14593 569 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 KLF17Q5JT82 389 aaPredicted RBP5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 C22orf42Q6IC83 251 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 BRICD5Q6PL45 260 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 PNLDC1Q8NA58 520 aaKnown RBP5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 ITFG2Q969R8 447 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 SDSLQ96GA7 329 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 POM121Q96HA1 1249 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 S100A13Q99584 98 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 DCTN5Q9BTE1 182 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 BANF2Q9H503 90 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 HMG20AQ9NP66 347 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 NDUFB11Q9NX14 153 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 MRPS28Q9Y2Q9 187 aaKnown RBP5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 SF3B6Q9Y3B4 125 aaKnown RBP5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 AK6Q9Y3D8 172 aaKnown RBP5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 GEMIN2O14893 280 aaKnown RBP5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 ZNF737O75373 536 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 SC5DO75845 299 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 OR7C1O76099 320 aaPredicted RBP5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 KDM4BO94953 1096 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 FSTL3O95633 263 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 EPHA1P21709 976 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 GABRA5P31644 462 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 NPY4RP50391 375 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 GRK1Q15835 563 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 KCTD21Q4G0X4 260 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 ATPAF1Q5TC12 328 aaPredicted RBP5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 METTL11BQ5VVY1 283 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 GLIPR1L1Q6UWM5 242 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 ZNF782Q6ZMW2 699 aaPredicted RBP5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 C17orf107Q6ZR85 190 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 BCL6BQ8N143 479 aaPredicted RBP5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 BPIFB2Q8N4F0 458 aa5.98□□□□□ -1.45
DEPDC1B-201ENST00000265036 TMEM104Q8NE00 496 aa5.98□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 43 ms