RNA–Protein interactions for RNA: ENST00000264010.8

CTCF-201, Transcript of CCCTC-binding factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTCF, Length 3,939 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCF-201ENST00000264010 OR2AE1Q8NHA4 323 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 SYT3Q9BQG1 590 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 GOLT1BQ9Y3E0 138 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 KCNMB2Q9Y691 235 aa14.28□□□□□ -0.12
CTCF-201ENST00000264010 PLSCR5A0PG75 271 aa14.27□□□□□ -0.12
CTCF-201ENST00000264010 TMEM14DPA8MWL7 114 aa14.27□□□□□ -0.12
CTCF-201ENST00000264010 ZIC3O60481 467 aa14.27□□□□□ -0.12
CTCF-201ENST00000264010 DBHP09172 617 aa14.27□□□□□ -0.12
CTCF-201ENST00000264010 MDKP21741 143 aaPredicted RBP14.27□□□□□ -0.12
CTCF-201ENST00000264010 OR5I1Q13606 314 aa14.27□□□□□ -0.12
CTCF-201ENST00000264010 PPA1Q15181 289 aa14.27□□□□□ -0.12
CTCF-201ENST00000264010 MAJINQ3KP22 176 aa14.27□□□□□ -0.12
CTCF-201ENST00000264010 Q5PR19 223 aa14.27□□□□□ -0.12
CTCF-201ENST00000264010 TMEM104Q8NE00 496 aa14.27□□□□□ -0.12
CTCF-201ENST00000264010 MRPS24Q96EL2 167 aaKnown RBP14.27□□□□□ -0.12
CTCF-201ENST00000264010 ZNF391Q9UJN7 358 aa14.27□□□□□ -0.12
CTCF-201ENST00000264010 KCNK7Q9Y2U2 307 aa14.27□□□□□ -0.12
CTCF-201ENST00000264010 ABCD4O14678 606 aa14.27□□□□□ -0.13
CTCF-201ENST00000264010 LRP3O75074 770 aa14.27□□□□□ -0.13
CTCF-201ENST00000264010 FXYD4P59646 89 aa14.27□□□□□ -0.13
CTCF-201ENST00000264010 PPP1R32Q7Z5V6 425 aa14.27□□□□□ -0.13
CTCF-201ENST00000264010 FNDC9Q8TBE3 224 aa14.27□□□□□ -0.13
CTCF-201ENST00000264010 TMEM54Q969K7 222 aa14.27□□□□□ -0.13
CTCF-201ENST00000264010 UQCC1Q9NVA1 299 aa14.27□□□□□ -0.13
CTCF-201ENST00000264010 KPTNQ9Y664 436 aa14.27□□□□□ -0.13
CTCF-201ENST00000264010 KLRC4-KLRK1H3BQV0 150 aa14.27□□□□□ -0.13
CTCF-201ENST00000264010 XRCC2O43543 280 aa14.27□□□□□ -0.13
CTCF-201ENST00000264010 PSMB6P28072 239 aa14.27□□□□□ -0.13
CTCF-201ENST00000264010 TLE1Q04724 770 aa14.27□□□□□ -0.13
CTCF-201ENST00000264010 SURF2Q15527 256 aaPredicted RBP14.27□□□□□ -0.13
CTCF-201ENST00000264010 TAF9Q16594 264 aa14.27□□□□□ -0.13
CTCF-201ENST00000264010 C20orf196Q8IYI0 205 aa14.27□□□□□ -0.13
CTCF-201ENST00000264010 EMG1Q92979 244 aaKnown RBP14.27□□□□□ -0.13
CTCF-201ENST00000264010 NUDT16L1Q9BRJ7 211 aaKnown RBP14.27□□□□□ -0.13
CTCF-201ENST00000264010 CHST5Q9GZS9 411 aa14.27□□□□□ -0.13
CTCF-201ENST00000264010 ZNF286AQ9HBT8 521 aa14.27□□□□□ -0.13
CTCF-201ENST00000264010 SRSF10O75494 262 aaKnown RBP14.26□□□□□ -0.13
CTCF-201ENST00000264010 MT-ND4LP03901 98 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 EIF3IQ13347 325 aaKnown RBP14.26□□□□□ -0.13
CTCF-201ENST00000264010 UNC119Q13432 240 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 VAMP3Q15836 100 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 DCAF12L2Q5VW00 463 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 RGS7BPQ6MZT1 257 aaPredicted RBP14.26□□□□□ -0.13
CTCF-201ENST00000264010 C11orf87Q6NUJ2 197 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 NANOS1Q8WY41 292 aaKnown RBP14.26□□□□□ -0.13
CTCF-201ENST00000264010 TAF9BQ9HBM6 251 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 LUZP4Q9P127 313 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 PLCE1Q9P212 2302 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 OR7C1O76099 320 aaPredicted RBP14.26□□□□□ -0.13
CTCF-201ENST00000264010 MT-CO3P00414 261 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 KLK2P20151 261 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 ARG2P78540 354 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 GGNBP1Q5YKI7 109 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 OVCH2Q7RTZ1 564 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 APH1AQ96BI3 265 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 PIPOXQ9P0Z9 390 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 VSIG4Q9Y279 399 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 ANGPTL7O43827 346 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 DUS4LO95620 317 aaKnown RBP14.26□□□□□ -0.13
CTCF-201ENST00000264010 DIRAS3O95661 229 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 PATE4P0C8F1 98 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 RPA2P15927 270 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 PAX6P26367 422 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 PTTG1IPP53801 180 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 SIRT7Q9NRC8 400 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 TMEM38BQ9NVV0 291 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 C1orf123Q9NWV4 160 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 KLF13Q9Y2Y9 288 aaPredicted RBP14.26□□□□□ -0.13
CTCF-201ENST00000264010 FLVCR1Q9Y5Y0 555 aa14.26□□□□□ -0.13
CTCF-201ENST00000264010 FPR2P25090 351 aa14.25□□□□□ -0.13
CTCF-201ENST00000264010 HOXC12P31275 282 aa14.25□□□□□ -0.13
CTCF-201ENST00000264010 APLNRP35414 380 aa14.25□□□□□ -0.13
CTCF-201ENST00000264010 TMEM41BQ5BJD5 291 aa14.25□□□□□ -0.13
CTCF-201ENST00000264010 SPINK14Q6IE38 97 aa14.25□□□□□ -0.13
CTCF-201ENST00000264010 GPR87Q9BY21 358 aa14.25□□□□□ -0.13
CTCF-201ENST00000264010 ESRP2Q9H6T0 727 aaKnown RBP14.25□□□□□ -0.13
CTCF-201ENST00000264010 LAMA1P25391 3075 aa14.25□□□□□ -0.13
CTCF-201ENST00000264010 ACP1P24666 158 aa14.25□□□□□ -0.13
CTCF-201ENST00000264010 F2RL1P55085 397 aa14.25□□□□□ -0.13
CTCF-201ENST00000264010 H2BFSP57053 126 aa14.25□□□□□ -0.13
CTCF-201ENST00000264010 OR1C1Q15619 314 aa14.25□□□□□ -0.13
CTCF-201ENST00000264010 OR5AS1Q8N127 324 aa14.25□□□□□ -0.13
CTCF-201ENST00000264010 AMDHD2Q9Y303 409 aa14.25□□□□□ -0.13
CTCF-201ENST00000264010 DNASE2O00115 360 aaPredicted RBP14.25□□□□□ -0.13
CTCF-201ENST00000264010 PRF1P14222 555 aa14.25□□□□□ -0.13
CTCF-201ENST00000264010 MRPL49Q13405 166 aaKnown RBP14.25□□□□□ -0.13
CTCF-201ENST00000264010 MICBQ29980 383 aa14.25□□□□□ -0.13
CTCF-201ENST00000264010 M0R296 226 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 DFFBO76075 338 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 MELTFP08582 738 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 ZNF468Q5VIY5 522 aaPredicted RBP14.24□□□□□ -0.13
CTCF-201ENST00000264010 CCDC71LQ8N9Z2 235 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 MARVELD3Q96A59 401 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 NIPSNAP3BQ9BS92 247 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 SRXN1Q9BYN0 137 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 NECAP2Q9NVZ3 263 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 A0A1W2PP11 408 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 LDLRAD4O15165 306 aa14.24□□□□□ -0.13
CTCF-201ENST00000264010 SPRY1O43609 319 aaPredicted RBP14.24□□□□□ -0.13
CTCF-201ENST00000264010 TNFSF15O95150 251 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms