RNA–Protein interactions for RNA: ENST00000263856.8

CHMP3-201, Transcript of charged multivesicular body protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP3, Length 3,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-201ENST00000263856 OR10AD1Q8NGE0 317 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 RHBDD1Q8TEB9 315 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 TCTEX1D2Q8WW35 142 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 CRLF2Q9HC73 371 aa10.78□□□□□ -0.68
CHMP3-201ENST00000263856 NKX2-6A6NCS4 301 aa10.77□□□□□ -0.68
CHMP3-201ENST00000263856 FAM157AC9JC47 383 aa10.77□□□□□ -0.68
CHMP3-201ENST00000263856 BCAT2O15382 392 aaPredicted RBP10.77□□□□□ -0.68
CHMP3-201ENST00000263856 GAPDHP04406 335 aaKnown RBP10.77□□□□□ -0.68
CHMP3-201ENST00000263856 DANCRP0C864 163 aa10.77□□□□□ -0.68
CHMP3-201ENST00000263856 CCL3P10147 92 aa10.77□□□□□ -0.68
CHMP3-201ENST00000263856 CCL1P22362 96 aa10.77□□□□□ -0.68
CHMP3-201ENST00000263856 AADACP22760 399 aa10.77□□□□□ -0.68
CHMP3-201ENST00000263856 DUSP1P28562 367 aa10.77□□□□□ -0.68
CHMP3-201ENST00000263856 RBP2P50120 134 aa10.77□□□□□ -0.68
CHMP3-201ENST00000263856 ACER2Q5QJU3 275 aa10.77□□□□□ -0.68
CHMP3-201ENST00000263856 YRDCQ86U90 279 aaKnown RBP10.77□□□□□ -0.68
CHMP3-201ENST00000263856 C17orf78Q8N4C9 275 aa10.77□□□□□ -0.68
CHMP3-201ENST00000263856 TP53RKQ96S44 253 aa10.77□□□□□ -0.68
CHMP3-201ENST00000263856 ZNF251Q9BRH9 671 aa10.77□□□□□ -0.68
CHMP3-201ENST00000263856 WDFY4Q6ZS81 3184 aa10.77□□□□□ -0.68
CHMP3-201ENST00000263856 EXPH5Q8NEV8 1989 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 S100A8P05109 93 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 P2RY1P47900 373 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 RSPO1Q2MKA7 263 aaPredicted RBP10.77□□□□□ -0.69
CHMP3-201ENST00000263856 C9orf152Q5JTZ5 239 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 ZNF695Q8IW36 515 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 LGI3Q8N145 548 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 DMBX1Q8NFW5 382 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 SLC35B3Q9H1N7 401 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 ZNF286AQ9HBT8 521 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 TUBD1Q9UJT1 453 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 ZDHHC8Q9ULC8 765 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 LIPGQ9Y5X9 500 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 C3orf80F5H4A9 247 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 WRBO00258 174 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 TP53I11O14683 189 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 HSD17B6O14756 317 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 SMIM6P0DI80 62 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 EWSR1Q01844 656 aaKnown RBP eCLIP10.77□□□□□ -0.69
CHMP3-201ENST00000263856 ARL6IP1Q15041 203 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 RAB30Q15771 203 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 LIAT1Q6ZQX7 453 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 MAML2Q8IZL2 1156 aaPredicted RBP10.77□□□□□ -0.69
CHMP3-201ENST00000263856 NAT6Q93015 286 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 SYT3Q9BQG1 590 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 HDGFL3Q9Y3E1 203 aa10.77□□□□□ -0.69
CHMP3-201ENST00000263856 H0YL77 283 aa10.76□□□□□ -0.69
CHMP3-201ENST00000263856 H7C1Q1 480 aa10.76□□□□□ -0.69
CHMP3-201ENST00000263856 NRASP01111 189 aa10.76□□□□□ -0.69
CHMP3-201ENST00000263856 TAGLN2P37802 199 aaKnown RBP10.76□□□□□ -0.69
CHMP3-201ENST00000263856 HMGN3Q15651 99 aa10.76□□□□□ -0.69
CHMP3-201ENST00000263856 OR1J1Q8NGS3 322 aa10.76□□□□□ -0.69
CHMP3-201ENST00000263856 RNASE11Q8TAA1 199 aaKnown RBP10.76□□□□□ -0.69
CHMP3-201ENST00000263856 PAPOLGQ9BWT3 736 aaKnown RBP10.76□□□□□ -0.69
CHMP3-201ENST00000263856 CHRNA10Q9GZZ6 450 aa10.76□□□□□ -0.69
CHMP3-201ENST00000263856 STARD10Q9Y365 291 aa10.76□□□□□ -0.69
CHMP3-201ENST00000263856 TRAPPC6AO75865 159 aa10.76□□□□□ -0.69
CHMP3-201ENST00000263856 OR8U8P0C7N1 319 aa10.76□□□□□ -0.69
CHMP3-201ENST00000263856 ZNF32P17041 273 aa10.76□□□□□ -0.69
CHMP3-201ENST00000263856 UBE2KP61086 200 aa10.76□□□□□ -0.69
CHMP3-201ENST00000263856 CCL7P80098 99 aa10.76□□□□□ -0.69
CHMP3-201ENST00000263856 S100A12P80511 92 aa10.76□□□□□ -0.69
CHMP3-201ENST00000263856 OSR2Q8N2R0 312 aa10.76□□□□□ -0.69
CHMP3-201ENST00000263856 TM2D1Q9BX74 207 aa10.76□□□□□ -0.69
CHMP3-201ENST00000263856 V9GYS6 101 aa10.76□□□□□ -0.69
CHMP3-201ENST00000263856 FREM1Q5H8C1 2179 aa10.76□□□□□ -0.69
CHMP3-201ENST00000263856 ESPL1Q14674 2120 aa10.76□□□□□ -0.69
CHMP3-201ENST00000263856 AHCTF1Q8WYP5 2266 aa10.76□□□□□ -0.69
CHMP3-201ENST00000263856 IGKV1-12A0A0C4DH73 117 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 FOXI3A8MTJ6 420 aaPredicted RBP10.75□□□□□ -0.69
CHMP3-201ENST00000263856 UBE2CO00762 179 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 IGKV1D-12P01611 117 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 SEC11BP0C7V7 166 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 ATP6V0CP27449 155 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 NKX2-1P43699 371 aaPredicted RBP10.75□□□□□ -0.69
CHMP3-201ENST00000263856 AFF3P51826 1226 aaKnown RBP10.75□□□□□ -0.69
CHMP3-201ENST00000263856 RPS18P62269 152 aaKnown RBP10.75□□□□□ -0.69
CHMP3-201ENST00000263856 MALLQ13021 153 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 SLC25A26Q70HW3 274 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 SSC4DQ8WTU2 575 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 OCIAD1Q9NX40 245 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 KIAA2026Q5HYC2 2103 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 CCL2P13500 99 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 ECI1P42126 302 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 LSM6P62312 80 aaKnown RBP10.75□□□□□ -0.69
CHMP3-201ENST00000263856 CNN3Q15417 329 aaKnown RBP10.75□□□□□ -0.69
CHMP3-201ENST00000263856 C4orf17Q53FE4 359 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 CXorf66Q5JRM2 361 aaPredicted RBP10.75□□□□□ -0.69
CHMP3-201ENST00000263856 ZNF468Q5VIY5 522 aaPredicted RBP10.75□□□□□ -0.69
CHMP3-201ENST00000263856 NSUN5P2Q63ZY6 315 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 RABEPKQ7Z6M1 372 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 TMEM123Q8N131 208 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 OR5C1Q8NGR4 320 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 MR1Q95460 341 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 OR51B6Q9H340 312 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 RNF122Q9H9V4 155 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 PTRH2Q9Y3E5 179 aaKnown RBP10.75□□□□□ -0.69
CHMP3-201ENST00000263856 A0A0U1RQV5 110 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 AP4M1O00189 453 aa10.75□□□□□ -0.69
CHMP3-201ENST00000263856 IFNA17P01571 189 aa10.75□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms