RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 VN1R1Q9GZP7 353 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 CTDSP1Q9GZU7 261 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 ZNF286AQ9HBT8 521 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 TRBV24-1A0A075B6N3 115 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 TRAV1-1A0A0B4J248 108 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 FAM24AA6NFZ4 105 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 NDUFB7P17568 137 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 MSX1P28360 303 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 IL2RGP31785 369 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 FASLGP48023 281 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 JOSD1Q15040 202 aaPredicted RBP10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 SP5Q6BEB4 398 aaPredicted RBP10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 Q6ZSR3 168 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 ABHD5Q8WTS1 349 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 FRZBQ92765 325 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 MOB3AQ96BX8 217 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 CYYR1Q96J86 154 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 HDHD3Q9BSH5 251 aaPredicted RBP10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 TGIF2Q9GZN2 237 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 PRO1933Q9H354 126 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 C11orf1Q9H5F2 150 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 LYRM2Q9NU23 88 aaPredicted RBP10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 CA14Q9ULX7 337 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 B3GALT1Q9Y5Z6 326 aa10.8□□□□□ -0.68
CHMP2B-201ENST00000263780 TRDCB7Z8K6 153 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 H3BML4 177 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 ETV2O00321 342 aaPredicted RBP10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 CYB5R3P00387 301 aaPredicted RBP10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 FBLP22087 321 aaKnown RBP10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 CD200P41217 278 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 ZNF41P51814 821 aaPredicted RBP10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 FOXF1Q12946 379 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 CRIP3Q6Q6R5 217 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 CMTM1Q8IZ96 169 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 SPSB1Q96BD6 273 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 HIST1H2BLQ99880 126 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 FAAP24Q9BTP7 215 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 SLC7A11Q9UPY5 501 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 PIGLQ9Y2B2 252 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 IGHV5-51A0A0C4DH38 117 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 C9J4A7 227 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 DBHP09172 617 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 QDPRP09417 244 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 THEGLP0DJG4 465 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 MTCP1P56278 107 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 MYBPHQ13203 477 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 SMAD4Q13485 552 aaKnown RBP10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 TMEM252Q8N6L7 170 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 SLC35G3Q8N808 338 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 GJC3Q8NFK1 279 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 LIN37Q96GY3 246 aaPredicted RBP10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 REEP6Q96HR9 211 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 LYZL4Q96KX0 146 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 OXGR1Q96P68 337 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 LIME1Q9H400 295 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 MTCH2Q9Y6C9 303 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 A0A0C4DFX4 3053 aa10.79□□□□□ -0.68
CHMP2B-201ENST00000263780 LOC102723971A0A1B0GUV8 181 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 IGSF23A1L1A6 192 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 GEMIN2O14893 280 aaKnown RBP10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 FAHP16930 419 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 FBXW4P57775 412 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 MRPS21P82921 87 aaKnown RBP10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 SLC25A53Q5H9E4 307 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 PARM1Q6UWI2 310 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 TMEM183AQ8IXX5 376 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 ZNF100Q8IYN0 542 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 ZDHHC19Q8WVZ1 309 aaPredicted RBP10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 GAS2L1Q99501 681 aaPredicted RBP10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 ABHD14AQ9BUJ0 271 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 ACTR3CQ9C0K3 210 aaPredicted RBP10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 CERS4Q9HA82 394 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 C3orf85A0A1B0GTC6 90 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 DUXBA0A1W2PPF3 345 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 DFFBO76075 338 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 FOSL2P15408 326 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 OPRM1P35372 400 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 CCR5P51681 352 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 CHAF1BQ13112 559 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 MFAP5Q13361 173 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 OR8B8Q15620 311 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 USF2Q15853 346 aaPredicted RBP10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 C9orf50Q5SZB4 431 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 TSPO2Q5TGU0 170 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 CARD17Q5XLA6 110 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 SPRED2Q7Z698 418 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 ZNF695Q8IW36 515 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 OR5C1Q8NGR4 320 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 PIGTQ969N2 578 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 NDUFAF3Q9BU61 184 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 SMOC1Q9H4F8 434 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 LRP4O75096 1905 aa10.78□□□□□ -0.68
CHMP2B-201ENST00000263780 A8MWP6 167 aa10.77□□□□□ -0.68
CHMP2B-201ENST00000263780 MSTNO14793 375 aa10.77□□□□□ -0.68
CHMP2B-201ENST00000263780 TCAPO15273 167 aa10.77□□□□□ -0.68
CHMP2B-201ENST00000263780 MPPED1O15442 326 aa10.77□□□□□ -0.68
CHMP2B-201ENST00000263780 TRAF3IP2O43734 574 aaPredicted RBP10.77□□□□□ -0.68
CHMP2B-201ENST00000263780 ASCL1P50553 236 aa10.77□□□□□ -0.68
CHMP2B-201ENST00000263780 RRADP55042 308 aa10.77□□□□□ -0.68
CHMP2B-201ENST00000263780 RNF4P78317 190 aa10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms