RNA–Protein interactions for RNA: ENST00000263274.11

LIG1-201, Transcript of DNA ligase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene LIG1, Length 3,384 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1-201ENST00000263274 MAML2Q8IZL2 1156 aaPredicted RBP11.03□□□□□ -0.64
LIG1-201ENST00000263274 CADM4Q8NFZ8 388 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 SLC25A43Q8WUT9 341 aaPredicted RBP11.03□□□□□ -0.64
LIG1-201ENST00000263274 PP6455Q8WZ26 134 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 TCEAL7Q9BRU2 100 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 TGIF2Q9GZN2 237 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 NECAP2Q9NVZ3 263 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 UBE2J1Q9Y385 318 aaPredicted RBP11.03□□□□□ -0.64
LIG1-201ENST00000263274 ESPL1Q14674 2120 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 A0A1W2PPE3 182 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 A0A1W2PPH5 198 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 NPIPB13A6NJU9 1138 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 NPIPB4C9JG80 1138 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 ONECUT2O95948 504 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 JMJD7P0C870 316 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 DUSP1P28562 367 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 SULT1A2P50226 295 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 DVL1P1P54792 670 aaPredicted RBP11.03□□□□□ -0.64
LIG1-201ENST00000263274 SPEM2Q0P670 501 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 GNMTQ14749 295 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 RNF212Q495C1 297 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 AWAT1Q58HT5 328 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 SLC25A24Q6NUK1 477 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 RPUSD3Q6P087 351 aaKnown RBP11.03□□□□□ -0.64
LIG1-201ENST00000263274 NAA11Q9BSU3 229 aaPredicted RBP11.03□□□□□ -0.64
LIG1-201ENST00000263274 CHST5Q9GZS9 411 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 P4HTMQ9NXG6 502 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 ATG2AQ2TAZ0 1938 aa11.03□□□□□ -0.64
LIG1-201ENST00000263274 CACNA1HO95180 2353 aa11.02□□□□□ -0.64
LIG1-201ENST00000263274 GPR37O15354 613 aa11.02□□□□□ -0.64
LIG1-201ENST00000263274 IGHV2-70P01814 119 aa11.02□□□□□ -0.64
LIG1-201ENST00000263274 PRF1P14222 555 aa11.02□□□□□ -0.64
LIG1-201ENST00000263274 RPS2P15880 293 aaKnown RBP11.02□□□□□ -0.64
LIG1-201ENST00000263274 RBP2P50120 134 aa11.02□□□□□ -0.64
LIG1-201ENST00000263274 ENDOGQ14249 297 aaKnown RBP11.02□□□□□ -0.64
LIG1-201ENST00000263274 WDR74Q6RFH5 385 aaPredicted RBP11.02□□□□□ -0.64
LIG1-201ENST00000263274 OPN5Q6U736 354 aa11.02□□□□□ -0.64
LIG1-201ENST00000263274 KMT5CQ86Y97 462 aa11.02□□□□□ -0.64
LIG1-201ENST00000263274 GPR137CQ8N3F9 429 aa11.02□□□□□ -0.64
LIG1-201ENST00000263274 OR52M1Q8NGK5 317 aa11.02□□□□□ -0.64
LIG1-201ENST00000263274 LUZP4Q9P127 313 aa11.02□□□□□ -0.64
LIG1-201ENST00000263274 NUDT19A8MXV4 375 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 UMAD1C9J7I0 102 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 GNRHRP30968 328 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 SRYQ05066 204 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 ARL6IP1Q15041 203 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 MEGF10Q96KG7 1140 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 FBLN5Q9UBX5 448 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 DNAJC13O75165 2243 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 CACNA1DQ01668 2161 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 A0A0J9YW62 118 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 C7orf77A4D0Y5 90 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 FAM24AA6NFZ4 105 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 DEDDO75618 318 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 NRASP01111 189 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 ZNF32P17041 273 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 GPX4P36969 197 aaPredicted RBP11.02□□□□□ -0.65
LIG1-201ENST00000263274 TMEM268Q5VZI3 342 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 SVIPQ8NHG7 77 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 RNASE11Q8TAA1 199 aaKnown RBP11.02□□□□□ -0.65
LIG1-201ENST00000263274 SMIM8Q96KF7 97 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 OR51B6Q9H340 312 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 LIME1Q9H400 295 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 PLA2G2EQ9NZK7 142 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 SLC7A11Q9UPY5 501 aa11.02□□□□□ -0.65
LIG1-201ENST00000263274 IGHV5-10-1A0A0J9YXX1 117 aa11.01□□□□□ -0.65
LIG1-201ENST00000263274 CTSDP07339 412 aaPredicted RBP11.01□□□□□ -0.65
LIG1-201ENST00000263274 HNF4GQ14541 408 aa11.01□□□□□ -0.65
LIG1-201ENST00000263274 FAM89BQ8N5H3 189 aa11.01□□□□□ -0.65
LIG1-201ENST00000263274 ZFP62Q8NB50 900 aaPredicted RBP11.01□□□□□ -0.65
LIG1-201ENST00000263274 SYT3Q9BQG1 590 aa11.01□□□□□ -0.65
LIG1-201ENST00000263274 URGCP-MRPS24S4R325 110 aa11.01□□□□□ -0.65
LIG1-201ENST00000263274 A0A1W2PPE2 198 aa11.01□□□□□ -0.65
LIG1-201ENST00000263274 CDRT15L2A8MXV6 281 aa11.01□□□□□ -0.65
LIG1-201ENST00000263274 E5RGE8 158 aa11.01□□□□□ -0.65
LIG1-201ENST00000263274 CXCL13O43927 109 aa11.01□□□□□ -0.65
LIG1-201ENST00000263274 CST7O76096 145 aa11.01□□□□□ -0.65
LIG1-201ENST00000263274 CCL2P13500 99 aa11.01□□□□□ -0.65
LIG1-201ENST00000263274 VAMP2P63027 116 aa11.01□□□□□ -0.65
LIG1-201ENST00000263274 MALLQ13021 153 aa11.01□□□□□ -0.65
LIG1-201ENST00000263274 SSX2Q16385 188 aa11.01□□□□□ -0.65
LIG1-201ENST00000263274 MARS2Q96GW9 593 aaKnown RBP11.01□□□□□ -0.65
LIG1-201ENST00000263274 SLC2A9Q9NRM0 540 aa11.01□□□□□ -0.65
LIG1-201ENST00000263274 NSG2Q9Y328 171 aa11.01□□□□□ -0.65
LIG1-201ENST00000263274 FREM2Q5SZK8 3169 aa11□□□□□ -0.65
LIG1-201ENST00000263274 ST8SIA3O43173 380 aa11□□□□□ -0.65
LIG1-201ENST00000263274 CLN5O75503 358 aa11□□□□□ -0.65
LIG1-201ENST00000263274 EPHA1P21709 976 aa11□□□□□ -0.65
LIG1-201ENST00000263274 OTX2P32243 289 aa11□□□□□ -0.65
LIG1-201ENST00000263274 ZNF133P52736 654 aaPredicted RBP11□□□□□ -0.65
LIG1-201ENST00000263274 LSM6P62312 80 aaKnown RBP11□□□□□ -0.65
LIG1-201ENST00000263274 AAED1Q7RTV5 226 aa11□□□□□ -0.65
LIG1-201ENST00000263274 SLC16A14Q7RTX9 510 aa11□□□□□ -0.65
LIG1-201ENST00000263274 NUDT16L1Q9BRJ7 211 aaKnown RBP11□□□□□ -0.65
LIG1-201ENST00000263274 PHF7Q9BWX1 381 aaPredicted RBP11□□□□□ -0.65
LIG1-201ENST00000263274 NAA60Q9H7X0 242 aa11□□□□□ -0.65
LIG1-201ENST00000263274 ZNF286AQ9HBT8 521 aa11□□□□□ -0.65
LIG1-201ENST00000263274 KPTNQ9Y664 436 aa11□□□□□ -0.65
LIG1-201ENST00000263274 CCDC187A0A096LP49 1063 aa11□□□□□ -0.65
LIG1-201ENST00000263274 FBP1P09467 338 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms