RNA–Protein interactions for RNA: ENST00000262570.9

CHCHD3-201, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHCHD3, Length 1,598 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-201ENST00000262570 IL1AP01583 271 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 DUX4L2P0CJ85 424 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 DUX4L3P0CJ86 424 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 DUX4L4P0CJ87 422 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 DUX4L5P0CJ88 424 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 DUX4L6P0CJ89 424 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 DUX4L7P0CJ90 424 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 VSIG8P0DPA2 414 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 GTF2F2P13984 249 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 DUSP1P28562 367 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 RPS19P39019 145 aaKnown RBP13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 GABRA2P47869 451 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 CEBPDP49716 269 aaPredicted RBP13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 TMBIM6P55061 237 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 CLDN12P56749 244 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 TMEM249Q2WGJ8 235 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 NHLRC3Q5JS37 347 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 HES5Q5TA89 166 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 SFXN4Q6P4A7 337 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 DUX4L9Q6RFH8 374 aaPredicted RBP13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 NLRC3Q7RTR2 1065 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 TMEM104Q8NE00 496 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 OR8B3Q8NGG8 313 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 MRPS24Q96EL2 167 aaKnown RBP13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 GAFA1Q96PS6 74 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 OR8B2Q96RD0 313 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 TMUB1Q9BVT8 246 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 DUX4Q9UBX2 424 aa13.84□□□□□ -0.19
CHCHD3-201ENST00000262570 FAM157AC9JC47 383 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 SMAD7O15105 426 aaKnown RBP13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 SIGLEC5O15389 551 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 HAND1O96004 215 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 ARSBP15848 533 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 RANBP1P43487 201 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 CAPZA1P52907 286 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 SNU13P55769 128 aaKnown RBP13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 SEC61A1P61619 476 aaKnown RBP13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 IL13RA1P78552 427 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 QRFPP83859 136 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 BLMHQ13867 455 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 P2RY14Q15391 338 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 PIGYQ3MUY2 71 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 FAM216BQ8N7L0 139 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 OR51D1Q8NGF3 324 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 RAB2BQ8WUD1 216 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 FAM3DQ96BQ1 224 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 C1orf159Q96HA4 380 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 MED30Q96HR3 178 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 CST11Q9H112 138 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 METRNQ9UJH8 293 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 ST3GAL6Q9Y274 331 aa13.83□□□□□ -0.19
CHCHD3-201ENST00000262570 HIVEP1P15822 2718 aa13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 NKX6-3A6NJ46 265 aa13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 TMEM14DPA8MWL7 114 aa13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 FCN3O75636 299 aa13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 CHRM2P08172 466 aa13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 SLC2A2P11168 524 aaPredicted RBP13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 MGMTP16455 207 aa13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 SERPINB10P48595 397 aa13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 PITPNBP48739 271 aa13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 RBM11P57052 281 aaKnown RBP13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 IL13RA2Q14627 380 aa13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 C2orf76Q3KRA6 126 aa13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 OR10K2Q6IF99 312 aa13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 ZNF561Q8N587 486 aa13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 ZNRF1Q8ND25 227 aa13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 KCNG3Q8TAE7 436 aa13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 C18orf12Q96KH6 178 aa13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 BCL7BQ9BQE9 202 aa13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 BANF2Q9H503 90 aa13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 GLS2Q9UI32 602 aa13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 CEPT1Q9Y6K0 416 aa13.83□□□□□ -0.2
CHCHD3-201ENST00000262570 MALRD1Q5VYJ5 2156 aa13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 CR1P17927 2039 aa13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 DVL1O14640 695 aa13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 SH2D1BO14796 132 aa13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 CRTAPO75718 401 aaPredicted RBP13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 SELLP14151 372 aa13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 LMO1P25800 156 aa13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 NPY4RP50391 375 aa13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 COL10A1Q03692 680 aa13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 UNC119Q13432 240 aa13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 ESCO2Q56NI9 601 aa13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 WDR25Q64LD2 544 aaPredicted RBP13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 Q6P435 159 aa13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 FAM46BQ96A09 425 aa13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 SSBP3Q9BWW4 388 aaPredicted RBP13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 KCNK15Q9H427 330 aa13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 LIN7BQ9HAP6 207 aa13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 FBLN5Q9UBX5 448 aa13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 CLN8Q9UBY8 286 aa13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 DAPK2Q9UIK4 370 aa13.82□□□□□ -0.2
CHCHD3-201ENST00000262570 A8MXK9 166 aa13.81□□□□□ -0.2
CHCHD3-201ENST00000262570 GEMIN2O14893 280 aaKnown RBP13.81□□□□□ -0.2
CHCHD3-201ENST00000262570 LDLRAD4O15165 306 aa13.81□□□□□ -0.2
CHCHD3-201ENST00000262570 ZNF737O75373 536 aa13.81□□□□□ -0.2
CHCHD3-201ENST00000262570 OR2H2O95918 312 aa13.81□□□□□ -0.2
CHCHD3-201ENST00000262570 IGHV4-31P0DP07 118 aa13.81□□□□□ -0.2
CHCHD3-201ENST00000262570 CD99P14209 185 aa13.81□□□□□ -0.2
CHCHD3-201ENST00000262570 GNB2P62879 340 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms