RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 BLKP51451 505 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 SLC35A1P78382 337 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 PNLIPRP3Q17RR3 467 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 ZNF774Q6NX45 483 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 ZNF880Q6PDB4 577 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 CA5BP1Q8WTZ4 195 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 TMEM171Q8WVE6 324 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 ASB13Q8WXK3 278 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 EMG1Q92979 244 aaKnown RBP11.3□□□□□ -0.6
SNX1-201ENST00000261889 RAB39BQ96DA2 213 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 SSX3Q99909 188 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 SLC2A9Q9NRM0 540 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 DOK5Q9P104 306 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 HS3ST3A1Q9Y663 406 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 KPTNQ9Y664 436 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 TMEM127O75204 238 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 JTBO76095 146 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 LCATP04180 440 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 DEFA4P12838 97 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 B4GALT1P15291 398 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 TSC22D1Q15714 1073 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 ZNF600Q6ZNG1 722 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 Q6ZPA2 131 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 Q8WTZ3 238 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 SAT2Q96F10 170 aaPredicted RBP11.3□□□□□ -0.6
SNX1-201ENST00000261889 PARP11Q9NR21 331 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 MMP17Q9ULZ9 603 aa11.3□□□□□ -0.6
SNX1-201ENST00000261889 HSD17B6O14756 317 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 S100PP25815 95 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 CD38P28907 300 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 EIF2S3P41091 472 aaKnown RBP11.29□□□□□ -0.6
SNX1-201ENST00000261889 NPBWR2P48146 333 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 C17orf67Q0P5P2 114 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 ZNF154Q13106 437 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 RSPO1Q2MKA7 263 aaPredicted RBP11.29□□□□□ -0.6
SNX1-201ENST00000261889 WDR25Q64LD2 544 aaPredicted RBP11.29□□□□□ -0.6
SNX1-201ENST00000261889 DMRTC2Q8IXT2 367 aaPredicted RBP11.29□□□□□ -0.6
SNX1-201ENST00000261889 RBMXL1Q96E39 390 aaKnown RBP11.29□□□□□ -0.6
SNX1-201ENST00000261889 POM121Q96HA1 1249 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 OR6C1Q96RD1 312 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 MRPL13Q9BYD1 178 aaKnown RBP11.29□□□□□ -0.6
SNX1-201ENST00000261889 ZNF442Q9H7R0 627 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 SDHAF3Q9NRP4 125 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 ANXA10Q9UJ72 324 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 FIGNL2A6NMB9 653 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 HSPB2A8KAH6 182 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 AP4M1O00189 453 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 SMIM6P0DI80 62 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 ATP6V0CP27449 155 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 GUCA1AP43080 201 aaPredicted RBP11.29□□□□□ -0.6
SNX1-201ENST00000261889 UBE2KP61086 200 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 HSPB2Q16082 182 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 PTX4Q96A99 478 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 INTS12Q96CB8 462 aaKnown RBP11.29□□□□□ -0.6
SNX1-201ENST00000261889 TWSG1Q9GZX9 223 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 TOLLIPQ9H0E2 274 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 UNKLQ9H9P5 680 aaKnown RBP11.29□□□□□ -0.6
SNX1-201ENST00000261889 TMEM131Q92545 1883 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 SPTBN2O15020 2390 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 USF3Q68DE3 2245 aa11.29□□□□□ -0.6
SNX1-201ENST00000261889 IGSF23A1L1A6 192 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 ZNF724A8MTY0 619 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 H3BQ15 152 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 IGHV2-70P01814 119 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 HAAOP46952 286 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 RAB2AP61019 212 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 HOXA4Q00056 320 aaPredicted RBP11.28□□□□□ -0.6
SNX1-201ENST00000261889 LCN15Q6UWW0 184 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 SKA3Q8IX90 412 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 TSTD1Q8NFU3 115 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 NEK7Q8TDX7 302 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 TCTEX1D2Q8WW35 142 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 PIGCQ92535 297 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 SCRT1Q9BWW7 348 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 LUZP4Q9P127 313 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 IGHV1OR21-1A0A087WYE8 117 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 NSG1A0A0A6YYJ2 146 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 IGKV1-12A0A0C4DH73 117 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 M0R135 149 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 GALR2O43603 387 aaPredicted RBP11.28□□□□□ -0.6
SNX1-201ENST00000261889 IGKV1D-12P01611 117 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 SOD3P08294 240 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 EDN3P14138 238 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 AADACP22760 399 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 TAS2R46P59540 309 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 TMEM267Q0VDI3 215 aaPredicted RBP11.28□□□□□ -0.6
SNX1-201ENST00000261889 GAMTQ14353 236 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 PPA1Q15181 289 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 OR5C1Q8NGR4 320 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 ZNF799Q96GE5 643 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 A0A1B0GX78 115 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 ANKUB1A6NFN9 424 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 SOX15O60248 233 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 HEXAP06865 529 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 MLF1P58340 268 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 RND3P61587 244 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 MPV17LQ2QL34 196 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 PLPPR5Q32ZL2 321 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 SNX22Q96L94 193 aa11.28□□□□□ -0.6
SNX1-201ENST00000261889 CCNL2Q96S94 520 aaPredicted RBP11.28□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms