RNA–Protein interactions for RNA: ENST00000260130.8

SDCBP-201, Transcript of syndecan binding protein, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SDCBP, Length 2,167 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-201ENST00000260130 LGALS14Q8TCE9 139 aa14.11□□□□□ -0.15
SDCBP-201ENST00000260130 PIGCQ92535 297 aa14.11□□□□□ -0.15
SDCBP-201ENST00000260130 RNF166Q96A37 237 aaPredicted RBP14.11□□□□□ -0.15
SDCBP-201ENST00000260130 OR14A2Q96R54 314 aa14.11□□□□□ -0.15
SDCBP-201ENST00000260130 TMA7Q9Y2S6 64 aaKnown RBP14.11□□□□□ -0.15
SDCBP-201ENST00000260130 CSPG4Q6UVK1 2322 aa14.11□□□□□ -0.15
SDCBP-201ENST00000260130 ZNF816-ZNF321PA0A0X1KG74 233 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 LINC00862A6NCI5 91 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 LRRC30A6NM36 301 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 ZNF850A8MQ14 1090 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 TMEM178BH3BS89 294 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 SSNA1O43805 119 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 ECDO95905 644 aaPredicted RBP14.1□□□□□ -0.15
SDCBP-201ENST00000260130 MT-ND4P03905 459 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 CXCL3P19876 107 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 IL2RGP31785 369 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 PMELP40967 661 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 PRDX4Q13162 271 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 ODF4Q2M2E3 257 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 WDR38Q5JTN6 314 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 ZNF680Q8NEM1 530 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 UFSP2Q9NUQ7 469 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 SCP2D1Q9UJQ7 156 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 ANXA2P2A6NMY6 339 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 CD5LO43866 347 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 PRAF2O60831 178 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 GRPP07492 148 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 IGHV4-31P0DP07 118 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 SRMP19623 302 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 GDNFP39905 211 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 AP3S2P59780 193 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 CYB5R2Q6BCY4 276 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 FDX2Q6P4F2 183 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 DOK3Q7L591 496 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 OR2G2Q8NGZ5 317 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 SUN5Q8TC36 379 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 Q8TCH9 128 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 FN3KRPQ9HA64 309 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 PLEKHA1Q9HB21 404 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 PIGLQ9Y2B2 252 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 V9GYS6 101 aa14.1□□□□□ -0.15
SDCBP-201ENST00000260130 NAP1L6A6NFF2 107 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 PEX14O75381 377 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 CCL1P22362 96 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 Q6ZSR3 168 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 CMTM4Q8IZR5 234 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 OR11H4Q8NGC9 324 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 MICU1Q9BPX6 476 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 MRI1Q9BV20 369 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 C20orf85Q9H1P6 137 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 FRRS1LQ9P0K9 344 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 CYB5R3P00387 301 aaPredicted RBP14.09□□□□□ -0.15
SDCBP-201ENST00000260130 IGHV2-70P01814 119 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 IRF2P14316 349 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 FAHP16930 419 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 KIR3DL2P43630 455 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 AP2S1P53680 142 aaPredicted RBP14.09□□□□□ -0.15
SDCBP-201ENST00000260130 LMO4P61968 165 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 SIGIRRQ6IA17 410 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 ZDHHC23Q8IYP9 409 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 C1orf87Q8N0U7 546 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 OR8H3Q8N146 312 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 OR11L1Q8NGX0 322 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 OR14K1Q8NGZ2 314 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 OR5P3Q8WZ94 311 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 HIST1H2AAQ96QV6 131 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 NOX4Q9NPH5 578 aa14.09□□□□□ -0.15
SDCBP-201ENST00000260130 DHRS7CA6NNS2 312 aa14.08□□□□□ -0.16
SDCBP-201ENST00000260130 GABARAPH6UMI1 98 aa14.08□□□□□ -0.16
SDCBP-201ENST00000260130 AIPO00170 330 aa14.08□□□□□ -0.16
SDCBP-201ENST00000260130 SYT7O43581 403 aa14.08□□□□□ -0.16
SDCBP-201ENST00000260130 IFNA7P01567 189 aa14.08□□□□□ -0.16
SDCBP-201ENST00000260130 UBCP0CG48 685 aaKnown RBP14.08□□□□□ -0.16
SDCBP-201ENST00000260130 CCR9P51686 369 aa14.08□□□□□ -0.16
SDCBP-201ENST00000260130 NANOS3P60323 173 aaKnown RBP14.08□□□□□ -0.16
SDCBP-201ENST00000260130 MSI2Q96DH6 328 aaKnown RBP14.08□□□□□ -0.16
SDCBP-201ENST00000260130 PDCD1LG2Q9BQ51 273 aa14.08□□□□□ -0.16
SDCBP-201ENST00000260130 RTL8AQ9BWD3 113 aa14.08□□□□□ -0.16
SDCBP-201ENST00000260130 AUNIPQ9H7T9 357 aa14.08□□□□□ -0.16
SDCBP-201ENST00000260130 ZNF281Q9Y2X9 895 aa14.08□□□□□ -0.16
SDCBP-201ENST00000260130 DYSFO75923 2080 aa14.08□□□□□ -0.16
SDCBP-201ENST00000260130 TLN2Q9Y4G6 2542 aa14.08□□□□□ -0.16
SDCBP-201ENST00000260130 IFITM5A6NNB3 132 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 SHOXO15266 292 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 SULT1B1O43704 296 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 ZMYND11Q15326 602 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 TMEM244Q5VVB8 128 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 WDR86Q86TI4 376 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 OR1M1Q8NGA1 313 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 RPS4Y2Q8TD47 263 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 GAL3ST1Q99999 423 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 ZNF436Q9C0F3 470 aaPredicted RBP14.07□□□□□ -0.16
SDCBP-201ENST00000260130 C1orf123Q9NWV4 160 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 RNF7Q9UBF6 113 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 AUP1Q9Y679 476 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 TANC2Q9HCD6 1990 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 A6NLC8 198 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 MRPS10P82664 201 aaKnown RBP14.07□□□□□ -0.16
SDCBP-201ENST00000260130 ZNF154Q13106 437 aa14.07□□□□□ -0.16
SDCBP-201ENST00000260130 ALKBH1Q13686 389 aaKnown RBP14.07□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms