RNA–Protein interactions for RNA: ENST00000258607.9

CKAP2-201, Transcript of cytoskeleton associated protein 2, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CKAP2, Length 3,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKAP2-201ENST00000258607 MCRIP1C9JLW8 97 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 PROB1E7EW31 1015 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 SPRY3O43610 288 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 TIMM8AO60220 97 aaPredicted RBP7.84□□□□□ -1.15
CKAP2-201ENST00000258607 IFNA7P01567 189 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 CALCRP30988 508 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 ZNF616Q08AN1 781 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 ZNF610Q8N9Z0 462 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 ZSCAN4Q8NAM6 433 aaPredicted RBP7.84□□□□□ -1.15
CKAP2-201ENST00000258607 TMEM178AQ8NBL3 297 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 KCNE4Q8WWG9 221 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 HAS2Q92819 552 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 FOXRED1Q96CU9 486 aaPredicted RBP7.84□□□□□ -1.15
CKAP2-201ENST00000258607 LIME1Q9H400 295 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 LHX6Q9UPM6 363 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 UBE2J1Q9Y385 318 aaPredicted RBP7.84□□□□□ -1.15
CKAP2-201ENST00000258607 CSMD2Q7Z408 3487 aa7.84□□□□□ -1.15
CKAP2-201ENST00000258607 LOC102725191A0A1B0GVB3 256 aa7.84□□□□□ -1.16
CKAP2-201ENST00000258607 CST7O76096 145 aa7.84□□□□□ -1.16
CKAP2-201ENST00000258607 IFI6P09912 130 aa7.84□□□□□ -1.16
CKAP2-201ENST00000258607 OR8U9P0C7N5 309 aa7.84□□□□□ -1.16
CKAP2-201ENST00000258607 EDDM3BP56851 147 aa7.84□□□□□ -1.16
CKAP2-201ENST00000258607 ERVFRD-1P60508 538 aa7.84□□□□□ -1.16
CKAP2-201ENST00000258607 RPS27AP62979 156 aaKnown RBP7.84□□□□□ -1.16
CKAP2-201ENST00000258607 TOR2AQ5JU69 321 aa7.84□□□□□ -1.16
CKAP2-201ENST00000258607 OR2A2Q6IF42 318 aa7.84□□□□□ -1.16
CKAP2-201ENST00000258607 OR8U1Q8NH10 309 aa7.84□□□□□ -1.16
CKAP2-201ENST00000258607 MRGPRFQ96AM1 343 aa7.84□□□□□ -1.16
CKAP2-201ENST00000258607 SLA2Q9H6Q3 261 aa7.84□□□□□ -1.16
CKAP2-201ENST00000258607 B3GNT2Q9NY97 397 aa7.84□□□□□ -1.16
CKAP2-201ENST00000258607 FASNP49327 2511 aaKnown RBP7.83□□□□□ -1.16
CKAP2-201ENST00000258607 TMEM14DPA8MWL7 114 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 TUSC2O75896 110 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 IGHEP01854 428 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 PRH1P02810 166 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 PDGFAP04085 211 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 ISG15P05161 165 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 GABRA1P14867 456 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 RAP2BP61225 183 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 LSM6P62312 80 aaKnown RBP7.83□□□□□ -1.16
CKAP2-201ENST00000258607 MRPS10P82664 201 aaKnown RBP7.83□□□□□ -1.16
CKAP2-201ENST00000258607 CNN3Q15417 329 aaKnown RBP7.83□□□□□ -1.16
CKAP2-201ENST00000258607 CLVS2Q5SYC1 327 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 SIGIRRQ6IA17 410 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 BTNL3Q6UXE8 466 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 MKXQ8IYA7 352 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 ZNF565Q8N9K5 539 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 SLC25A40Q8TBP6 338 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 KIRREL1Q96J84 757 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 TRAPPC2LQ9UL33 140 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 G3V3Q6 166 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 PTBP1P26599 531 aaKnown RBP eCLIP7.83□□□□□ -1.161e-8■■■■□ 21.6
CKAP2-201ENST00000258607 HOXD11P31277 338 aaPredicted RBP7.83□□□□□ -1.16
CKAP2-201ENST00000258607 PDZK1IP1Q13113 114 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 C1orf100Q5SVJ3 147 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 FAM166AQ6J272 317 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 SLC25A24Q6NUK1 477 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 TMEM88Q6PEY1 159 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 SLC36A1Q7Z2H8 476 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 C9orf106Q8NAJ2 232 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 OR1K1Q8NGR3 316 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 RTN4IP1Q8WWV3 396 aaPredicted RBP7.83□□□□□ -1.16
CKAP2-201ENST00000258607 AQP3Q92482 292 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 DMRTA2Q96SC8 542 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 FAM96BQ9Y3D0 163 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 PCSK5Q92824 1860 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 ZNF462Q96JM2 2506 aa7.83□□□□□ -1.16
CKAP2-201ENST00000258607 ZNF816-ZNF321PA0A0X1KG74 233 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 OR6C6A6NF89 314 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 OR6C65A6NJZ3 312 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 HMGB3O15347 200 aaKnown RBP7.82□□□□□ -1.16
CKAP2-201ENST00000258607 ZNF735P0CB33 412 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 ATF4P18848 351 aaPredicted RBP7.82□□□□□ -1.16
CKAP2-201ENST00000258607 TNFSF10P50591 281 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 PAN3Q58A45 887 aaKnown RBP7.82□□□□□ -1.16
CKAP2-201ENST00000258607 SLC25A53Q5H9E4 307 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 LY6G6FQ5SQ64 297 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 THOC7Q6I9Y2 204 aaKnown RBP7.82□□□□□ -1.16
CKAP2-201ENST00000258607 LYG2Q86SG7 212 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 WFDC8Q8IUA0 241 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 TMEM229BQ8NBD8 167 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 OR2Z1Q8NG97 314 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 TMEM54Q969K7 222 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 C1orf147Q96MC9 270 aaPredicted RBP7.82□□□□□ -1.16
CKAP2-201ENST00000258607 TAAR6Q96RI8 345 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 C20orf24Q9BUV8 137 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 GON7Q9BXV9 100 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 IL18BPO95998 194 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 ZNF728P0DKX0 622 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 SELLP14151 372 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 AADACP22760 399 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 PTAFRP25105 342 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 MPV17P39210 176 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 WNT5AP41221 380 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 PCBD1P61457 104 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 FAM27E3Q08E93 113 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 RBM39Q14498 530 aaKnown RBP7.82□□□□□ -1.16
CKAP2-201ENST00000258607 FDX2Q6P4F2 183 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 ZDHHC23Q8IYP9 409 aa7.82□□□□□ -1.16
CKAP2-201ENST00000258607 C7orf50Q9BRJ6 194 aaKnown RBP7.82□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms